Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0257 ATGTCTCGAAGATCGACCAGGTTAGTGGAAAAGGCGAATGAATATTTAGAGAAACCCACAAATAGTGAAACTGCAAAATCATCCAGAACTAAGAGATATGGTATATCTAAGGGAAACCTTAAATCTTCTAGGAGTCAGAAGTGGACACGAAATAATGAGATTAAGGTAAATGAAGTTACGTGTCCTCCATCTTTTGAGCAATTAGAGGGCAAGAAGAGAAAGACATCTAGTAAGAGGTCAATCACAAGAGCAACTACTTCAAAGAAGTTTAGGTCCGAGGAGGGGATCAACAAAAAAGGGAGTGGGAGATTAAGGAAGAGGGTGTATTATCAAAAAGTGGTTTTTGATGGTGGTGAATTTGAGGTTGGGGATGATGTTTATGTGAGGAGGAGAGAAGATGCAAGCTCTGACGATGAAGACCCTGAAGTTGAGGAGTGTAGAGTGTGCTTTAAGTCTGGAAAGGCTATAATGATCGAGTGTGATGATTGTCTTGGTGGTTTTCATTTGAAGTGTTTGAAGCCGCCATTCAAGGTAATCCCTGAGGGGGATTGGATTTGTGGGTTTTGTGAGGCTGCTAAAATGGGCAAAGAGGTTCAGTTTCCAAAGCCTCCAGAGGGTAAAAAACGGGTTAGGACAATGAGAGAGAAGCTTCTAGCAGGCGATTTGTGGGCTGCTCACATTGAAAGTTTATGGAAAGAAGTGAATGGTAACCATCAGTGTAAGGTTAGATGGTATATAATCCCAGAAGAGACCGAAGCTGGAAGGCAACCACATAACTTGAAGAGAGAGCTTTATTTAACTAATGATTATGCAGATATTGAGATGGAATCACTTCTTAGACTGTGTGAAGTCATGAATCCTAAAGACTATTATAATGCCAAGGAAGGGGATGATATATTTTTTTGTGAGTATGAATATGACGTTCGTTGGCATAGTTTCAAGAGATTAGCTGAAATTGATAAAGAAGAGGATAGTGAAGCAATTGATAGTGACAAAGAGTGGAAGTTGGACCAGAATGCAGACTCTGATTCAGATGGTGATGTGGAATATGAAGAAGAGAGAGCACACATTTTACAATCTCGAAACTACTCAAGATCAACCCATGAATTGGCCGCAAATTCAAGGAAAGGACGATTTTGTGGACTACAAAAGATAGGAGCTAAGAAGATCCCAGAGCATATAAGATGCCACAAACAGACTGAATTGGAAAGAGCAAAGGCAACCCTCATGTTGGCGTCCCTACCCAAGTCTCTACCGTGTAGAAATAAAGAAATTGAGGAGATAACTACATTTATAGAAAGTGCTTTATGTGATGATCAATGCTTGGGGCGATGCTTGTACATCCATGGTGTTCCAGGAACAGGCAAGACAATGAGTGTGCTGTCAGTAATGAGGAACTTGCGGGCTAAAGTTGATGCAGGAAATATAAGGCCTCATTGCTTTGTGGAGGTTAATGGTCTAAAGCTGGCAGCGCCAGAAAATATATACAGGGTTATACATGAAGCATTAACCGGGTATAGGGTTAATTGGAAAAAGGCGCTTCAGTTGTTGACCAAACGGTTTTCAGATGTAAATAATTGCAGGGATGATGAGCGACCTTGCATTCTGCTCATTGATGAACTTGATCTTCTTGTAACAAGAAACCAGTCAGTTCTATACAACATTCTTGATTGGCCTACAAAGCCACAAGCAAAGTTGATTGTGATAGGAATTGCAAATACCATGGACCTACCTGAGAAGTTGCTTCCTCGAATTTCAAGCCGAATGGGTATTGAAAGGCTTTGTTTCGGCCCTTATAACTATCAGCAACTTCAAGAAATCATTTTGAGCCGCCTTGAAGGAATCAATGCGTTTGAGAAACAAGCTATTGAATTCGCATCGAGAAAGGTAGCTGCTATTTCAGGAGATGCACGCCGTGCTCTGGAGATATGTAGGCGTGCAGCTGAAATTACGGATTATCATTTAAAGAAGCAGCTGAGTTTGACTTCCAACACTGGTTGTTTCCCCATTGCTTCCTTGCAATTACATGGCAAGGCACAATTTCTTTTGTTCGATGTGTTTAGGGCAGTATTAGGTTTTGGCTATTATGTCCCAAATTTTGGTTCTTTCCATGTGAGTGAGCAAACCGACCATTGCTTTACTAACAGGAAGAGCTAG 2157 41.03 MSRRSTRLVEKANEYLEKPTNSETAKSSRTKRYGISKGNLKSSRSQKWTRNNEIKVNEVTCPPSFEQLEGKKRKTSSKRSITRATTSKKFRSEEGINKKGSGRLRKRVYYQKVVFDGGEFEVGDDVYVRRREDASSDDEDPEVEECRVCFKSGKAIMIECDDCLGGFHLKCLKPPFKVIPEGDWICGFCEAAKMGKEVQFPKPPEGKKRVRTMREKLLAGDLWAAHIESLWKEVNGNHQCKVRWYIIPEETEAGRQPHNLKRELYLTNDYADIEMESLLRLCEVMNPKDYYNAKEGDDIFFCEYEYDVRWHSFKRLAEIDKEEDSEAIDSDKEWKLDQNADSDSDGDVEYEEERAHILQSRNYSRSTHELAANSRKGRFCGLQKIGAKKIPEHIRCHKQTELERAKATLMLASLPKSLPCRNKEIEEITTFIESALCDDQCLGRCLYIHGVPGTGKTMSVLSVMRNLRAKVDAGNIRPHCFVEVNGLKLAAPENIYRVIHEALTGYRVNWKKALQLLTKRFSDVNNCRDDERPCILLIDELDLLVTRNQSVLYNILDWPTKPQAKLIVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYQQLQEIILSRLEGINAFEKQAIEFASRKVAAISGDARRALEICRRAAEITDYHLKKQLSLTSNTGCFPIASLQLHGKAQFLLFDVFRAVLGFGYYVPNFGSFHVSEQTDHCFTNRKS 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4836643 4844314 - CePI673135_08g002570.1 Cec08g0257 208899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0257 718 SUPERFAMILY FYVE/PHD zinc finger 132 195 IPR011011 -
Cec08g0257 718 FunFam Origin recognition complex subunit 1 209 401 - -
Cec08g0257 718 MobiDBLite consensus disorder prediction 327 342 - -
Cec08g0257 718 Pfam BAH domain 226 315 IPR001025 GO:0003682(InterPro)
Cec08g0257 718 FunFam Origin recognition complex subunit 1 594 671 - -
Cec08g0257 718 Gene3D - 595 668 - -
Cec08g0257 718 SMART PHD_3 145 190 IPR001965 -
Cec08g0257 718 Pfam ATPase family associated with various cellular activities (AAA) 447 591 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec08g0257 718 Pfam PHD-finger 146 189 IPR019787 -
Cec08g0257 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 654 IPR027417 -
Cec08g0257 718 FunFam Origin recognition complex subunit 1 399 597 - -
Cec08g0257 718 MobiDBLite consensus disorder prediction 65 94 - -
Cec08g0257 718 ProSitePatterns Zinc finger PHD-type signature. 146 189 IPR019786 -
Cec08g0257 718 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 195 662 IPR050311 GO:0003688(PANTHER)|GO:0005664(PANTHER)|GO:0006270(PANTHER)|GO:0033314(PANTHER)
Cec08g0257 718 FunFam Origin recognition complex subunit 1 141 208 - -
Cec08g0257 718 Gene3D - 398 594 IPR027417 -
Cec08g0257 718 Gene3D - 84 332 IPR043151 -
Cec08g0257 718 ProSiteProfiles BAH domain profile. 202 317 IPR001025 GO:0003682(InterPro)
Cec08g0257 718 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 210 IPR013083 -
Cec08g0257 718 MobiDBLite consensus disorder prediction 18 47 - -
Cec08g0257 718 MobiDBLite consensus disorder prediction 1 47 - -
Cec08g0257 718 SMART BAH_4 177 317 IPR001025 GO:0003682(InterPro)
Cec08g0257 718 MobiDBLite consensus disorder prediction 1 17 - -
Cec08g0257 718 ProSiteProfiles Zinc finger PHD-type profile. 143 192 IPR019787 -
Cec08g0257 718 MobiDBLite consensus disorder prediction 327 348 - -
Cec08g0257 718 Pfam AAA lid domain 619 654 IPR041083 -
Cec08g0257 718 SMART AAA_5 442 595 IPR003593 GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2065 Cec-Chr2:38363585 Cec08g0257 Cec-Chr8:4836643 4.80E-26 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30009 PF00004 AAA 2.60E-19 CL0023 Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0257 K02603 - csv:101214082 1198.34