Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0325 ATGTTCAAAACCAGGGCTTGTTCCATCGTTTCAGCATCTTTTGGTCTACATCTATTATTCAGTAAAAATCCGCACCATGTGCTGAGGCTCAAAACTTTCCCGTTTCTATTGGTTCATCATAACGACCATGAAGTTTGCAACCAGGATTGTGGGGGACAAATGTTCTTTGGACTGAGCACTCTTATGTGCCTTGCACGAGTTCTTGTATTTTTGAAGAAGATGGTACCTTCGGGACCATCTACTCCCATTGGTGGTGCGCAGTCTGTTTCACCGTCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACACAGTTTAGCAGTATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTAAATCAGTCATTTGGTAATGGAGTTCCGAATTCTGGGCCCTCTGGCCTTGGAAACAGCCAACGAGGAGTTATGGACCCTGGTTCTGAGTCAGATCCATTTTCACTTGTTGGCAATGGTGTGAACTTCAACAATACCCCATCGTCATTGGTGACATCAAATACAGCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCAGCAATTTTCAAATCATTCTAGCAGCCAAATAATACCCAATCAACAGCAACCACAGCAAATTGAACCCCAGAACTTTCAACATGGTCAGCATTCAATGCAACAGTTCGCTACGTCTAATAACATACAGCAGGCACAGCAGCAGCAACAACAACAATACCAACGAGGAAGCTTGTGCGGTGTTGGACCCGTCAAGTTAGAGCCTCAAATGAATAATAATGATCTTCAAGCACAGCAACTACAGCAGCAGCAGCAGTTGCAGTCAATGAGGAATCTTGGTCCTGTGAAACTGGAACCACAACAACTTCAATCAATGAGAAACATGGGTCCTGTGAAATTGGAACCGCAACAGTCTGATCAGTCATTGTTTTTACAGCAGCAACATCAACATCAACAGCAACAGCAACAGCAACAGCAACAACAGCAGCTACTCAGTATGTCTAGGCAGTCCTCTCAGGCTGCTGCTGCACACATTAATCTTTTGCAACAACAAAGACTCTTGCAATTGCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGGCCGCATTTGCCTCAACAATTTCAACAACAAAATTTGCCATTGAGATCCCCTGTAAAATCAGTTTATGAACCTGGCATGTGTGCTCGACGTTTAACAAGTTATATGTGCCAACAACAGCAAAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAATTTGTTGCGGATTACTTTGCTCCCCATGCCAAAAAGAAATGGTGCGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCGACTTTTGAAGTTCTCCCAAGGCTGTTCAAAATCAAGTATGAGAGTGGAACGCTCGAAGAGCTTCTTTATGTTGATATGCCCCGCGAATATCATAATTCATCTGGACAAATTGTCCTTGATTACGCAAAAGCAATACAAGAAAGCGTATTTGAGCAACTTCGTGTTGTTCGCGATGGGCAACTTCGAATAGTTTTTTCTCCAGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTGCTAATACCTCAGGTTAGTCAGCTGGGTGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCATCATCTAACTTGCCTACTCCAGAGTTACAAAATAATTGCAACATGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTTCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTACGACTGGGCCAATTGAGAGTTTGGCAAAGTTTCCACGGAAGACGAATGCTTCACCAGGCTTCCACAGCCAAGCTCAAAATATGGAGCAACAATTACCTCAGCCGCAGCAAACAATTGATCAAAACGCAAATGGCGACCAAAGCTCTGCTCAGGCTGCTTCGATGCAGCTTGCTGCTAACAATGGTGTTCCAAGTGCAAATAACTCTGGTAATCCAGCGTCAACCTCATCCCCGGCCAGTACCATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATCAACAGCGCTGGCAGCCCTTATGCCGGAAATTCTGCGCAAATATCGTCTCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCTAACTCCTCGTTCCAATCGCCTACATTGTCCTCACCTAACAATCACCCACAATCATCAATTGGCACTGCAACAACTACTAATCACATGAGTGCCACTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCAACACAATCCTCAGATGCTGATCAAAACGATTCCCAAAGTTCGGTACAAAAGATTATTCAGGAATACATGATGTCGAATCATCTAAACGGGATGAACACAATGACTGGTGTATCCTCCATAGGAGATGAGGCGAAAACTGTTAACGGGATGTTGCCAGGAAACAACATTATGAGTCTCAATGGACGGAATGGACTCGTCGGGACTGGAACTGCTAATGGCGTTCCTGGGATCAGGAATGCAGGATATGGCTCAATGAGTGGGGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGTCAGCAATGGGAAATAACTCGATTTCGAACGGGAGAATTGGGATGGCATCATTGGCTCGAGGACAGAGCATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTCATAATCTTCAATTCGATTATTGA 2949 44.63 MFKTRACSIVSASFGLHLLFSKNPHHVLRLKTFPFLLVHHNDHEVCNQDCGGQMFFGLSTLMCLARVLVFLKKMVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNTPSMSSLLNQSFGNGVPNSGPSGLGNSQRGVMDPGSESDPFSLVGNGVNFNNTPSSLVTSNTANPGSSSQVSGQQFSNHSSSQIIPNQQQPQQIEPQNFQHGQHSMQQFATSNNIQQAQQQQQQQYQRGSLCGVGPVKLEPQMNNNDLQAQQLQQQQQLQSMRNLGPVKLEPQQLQSMRNMGPVKLEPQQSDQSLFLQQQHQHQQQQQQQQQQQQLLSMSRQSSQAAAAHINLLQQQRLLQLQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKSVYEPGMCARRLTSYMCQQQQRPEDNNIEFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLPTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETTTGPIESLAKFPRKTNASPGFHSQAQNMEQQLPQPQQTIDQNANGDQSSAQAASMQLAANNGVPSANNSGNPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSAQISSPGSSTTIAQAQANSSFQSPTLSSPNNHPQSSIGTATTTNHMSATNSPANVPLQQPTQSSDADQNDSQSSVQKIIQEYMMSNHLNGMNTMTGVSSIGDEAKTVNGMLPGNNIMSLNGRNGLVGTGTANGVPGIRNAGYGSMSGGLAQASMVNGMKSAMGNNSISNGRIGMASLARGQSINHQDLGDQLLNGLGAVNGFHNLQFDY 982
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7548167 7559218 + CePI673135_08g003250.1 Cec08g0325 208967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0325 982 MobiDBLite consensus disorder prediction 134 164 - -
Cec08g0325 982 MobiDBLite consensus disorder prediction 754 847 - -
Cec08g0325 982 MobiDBLite consensus disorder prediction 723 742 - -
Cec08g0325 982 PANTHER LIM DOMAIN-BINDING PROTEIN 303 978 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cec08g0325 982 Coils Coil 276 296 - -
Cec08g0325 982 Pfam LIM-domain binding protein 417 671 IPR029005 -
Cec08g0325 982 MobiDBLite consensus disorder prediction 173 253 - -
Cec08g0325 982 MobiDBLite consensus disorder prediction 134 253 - -
Cec08g0325 982 MobiDBLite consensus disorder prediction 316 348 - -
Cec08g0325 982 MobiDBLite consensus disorder prediction 689 718 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0946 Cec-Chr5:8272061 Cec08g0325 Cec-Chr8:7548167 2.10E-92 dispersed
Cec08g0325 Cec-Chr8:7548167 Cec08g0671 Cec-Chr8:18418847 2.10E-277 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0325 - - - 0.0