Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0349 | ATGCTTGGGGACTCCACTACTTCCGTCTTGGGCGGCGGCGCCGGAGGAGGAGAGGCCGCCGTGCCGGAGACGACTCATCATCACGATGGACTGATGGGGGACATGGAGGAGAATAATAACAATTCTGGTGAGGATGGGAGAGGGAGAAGCGGAGGTGGCGGCGGAGACGACGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACTTTAGCTCTCTTGAAAATACGGTCAGAAATGGACGTCGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAATTTCCAGGAAATTGGGGGAGCTTGGGTATCATCGAAGTGCAAAAAAATGCAAGGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACTAAAGAAGTTAGAAGTGGGAAACCAGATAGCAAAACTTATAAGTTCTTTGAACAATTAGAAGCTCTTGAGAATCACCCTCCTCTTAATTTCCACTCCCATTTGCCTAAACCAACTCCTCCGCCGCAGCCGCCACCGCATACCGCCGTCATTTCCCCCATTCCTTCAAGTACTGTTCCATCCACCACTCTACCTCACTTGATGAACATATCATTCTCTCAACCAAACCCCACAATTCATCTCCCATCTCCTCCGCCCCCTCCTGCTCCGTTGCCATTGAATAACCCTACAAGTTTACCCACCACCGTCCCTCCCTCCATGCCGTTTCAAATCAATATCTCTTCGGCGGGAGTGGGGTTTCAGAGCATTGAAGCGGATCTCATCTCGAACTCGACGTCTGATGATATCAATTCGTCAACATCATCGGATGAGGCGTCGAGAAAGAGGAGGAGGAAGAGGAAATGGAAGGACTTTTTTGAGAGATTGATGAAGGAAGTGATTCAAAAGCAAGAGGAAATGCAAAAGAGATTCTTGGAAGCAATTGAGAAGAGGGAGCAAGAGAGAGTTGTGAGAGAAGAAGCTTGGAGGATGCAAGAGATGGCCAAAATCAATAGAGAAAGAGAGATTTTAGCTCAAGAAAGATCAATGGCGGCTGCAAAAGATGCTGCGATTACATCGTTCCTTCAAAAAATAACTGAATCCCAACACAACAATAACAACAACAACGCATCACAACCGTCACCACCTCCCCCGCCACCGCCACCGTCCCAACAACAACAACCACCAATTCCAACGTCAAATCCAACACCAGTCGTGCAACCTTCACCGCGACCGCCACCTCCGGCCGCACCACAAGCTTCCACATTGCAAGTTGTTGTTCCCAATTCCACCCCACAAAAAGTGGGGAACAATAATGAATTGTTGCAAATGGAAATCATGAAAATGGATCATAATGGTGGGGAGAATTATAGCATTAGCCCAGCTTCGAGCTCATCAAGATGGCCAAAAGTGGAAGTTCAAGCACTTATCAAATTGAGAACAAACCTTGAAACCAAATATCAAGAGAATGGGCCAAAAGGGCCTTTATGGGAAGAGATATCATCAGCCATGAAGAAACTTGGGTACAATAGAAATGCAAAGAGGTGCAAAGAGAAGTGGGAAAACATAAACAAATACTTCAAGAAAGTGAAGGAAAGTAGAAAAGCAAGGCCTGAAGATTCCAAGACTTGCCCTTATTTTCACCAGCTTGATGCTTTGTATAGGGAGAAGAGCAACAACACGAACAACAACATAATCGGATCCTCGACGCAAATTATGCAGCATCAACAGCAGCCATTGATGGTTCGCCCCGAGCAACAATGGCCTCCCCAACAAGAGATCACCCGCCCCGACTCAGGAAATGAAGAGATGGAGAGTGAACCAATGGATCGTGATGATAAAGATGACGATGATGAAGATGAAGAGGAAGAGGACGAAGGTGGAGGGAACTATGAGATTGTGGCAAGCAAACCGGCTTCAGTGAGTGCTGCAGAGTGA | 1920 | 47.03 | MLGDSTTSVLGGGAGGGEAAVPETTHHHDGLMGDMEENNNNSGEDGRGRSGGGGGDDGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQISRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRSGKPDSKTYKFFEQLEALENHPPLNFHSHLPKPTPPPQPPPHTAVISPIPSSTVPSTTLPHLMNISFSQPNPTIHLPSPPPPPAPLPLNNPTSLPTTVPPSMPFQINISSAGVGFQSIEADLISNSTSDDINSSTSSDEASRKRRRKRKWKDFFERLMKEVIQKQEEMQKRFLEAIEKREQERVVREEAWRMQEMAKINREREILAQERSMAAAKDAAITSFLQKITESQHNNNNNNASQPSPPPPPPPPSQQQQPPIPTSNPTPVVQPSPRPPPPAAPQASTLQVVVPNSTPQKVGNNNELLQMEIMKMDHNGGENYSISPASSSSRWPKVEVQALIKLRTNLETKYQENGPKGPLWEEISSAMKKLGYNRNAKRCKEKWENINKYFKKVKESRKARPEDSKTCPYFHQLDALYREKSNNTNNNIIGSSTQIMQHQQQPLMVRPEQQWPPQQEITRPDSGNEEMESEPMDRDDKDDDDEDEEEEDEGGGNYEIVASKPASVSAAE | 639 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9266247 | 9268869 | + | CePI673135_08g003490.1 | Cec08g0349 | 208991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0349 | 639 | ProSiteProfiles | Myb-like domain profile. | 65 | 123 | IPR001005 | - | |
Cec08g0349 | 639 | PANTHER | FI21293P1 | 38 | 609 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 599 | 623 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 566 | 639 | - | - | |
Cec08g0349 | 639 | Coils | Coil | 284 | 315 | - | - | |
Cec08g0349 | 639 | Gene3D | - | 67 | 128 | - | - | |
Cec08g0349 | 639 | Gene3D | - | 462 | 523 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 372 | 413 | - | - | |
Cec08g0349 | 639 | ProSiteProfiles | Myb-like domain profile. | 454 | 518 | IPR001005 | - | |
Cec08g0349 | 639 | FunFam | Trihelix transcription factor GT-2 | 67 | 128 | - | - | |
Cec08g0349 | 639 | FunFam | Trihelix transcription factor GT-2 | 462 | 523 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 206 | 228 | - | - | |
Cec08g0349 | 639 | PRINTS | Proline rich extensin signature | 165 | 181 | - | - | |
Cec08g0349 | 639 | PRINTS | Proline rich extensin signature | 203 | 215 | - | - | |
Cec08g0349 | 639 | PRINTS | Proline rich extensin signature | 371 | 396 | - | - | |
Cec08g0349 | 639 | PRINTS | Proline rich extensin signature | 215 | 236 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 180 | 205 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 363 | 416 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 566 | 591 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 161 | 179 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 259 | 280 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 155 | 228 | - | - | |
Cec08g0349 | 639 | Pfam | Myb/SANT-like DNA-binding domain | 65 | 151 | IPR044822 | - | |
Cec08g0349 | 639 | Pfam | Myb/SANT-like DNA-binding domain | 460 | 547 | IPR044822 | - | |
Cec08g0349 | 639 | SMART | sant | 63 | 125 | IPR001005 | - | |
Cec08g0349 | 639 | SMART | sant | 458 | 520 | IPR001005 | - | |
Cec08g0349 | 639 | CDD | GT1 | 65 | 130 | - | - | |
Cec08g0349 | 639 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
Cec08g0349 | 639 | CDD | GT1 | 461 | 525 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0118 | Cec-Chr1:1029304 | Cec08g0349 | Cec-Chr8:9266247 | 4.20E-94 | dispersed | |
Cec01g1097 | Cec-Chr1:16969274 | Cec08g0349 | Cec-Chr8:9266247 | 2.40E-34 | dispersed | |
Cec02g0077 | Cec-Chr2:725182 | Cec08g0349 | Cec-Chr8:9266247 | 4.30E-84 | dispersed | |
Cec06g1005 | Cec-Chr6:14870775 | Cec08g0349 | Cec-Chr8:9266247 | 2.50E-37 | dispersed | |
Cec08g0349 | Cec-Chr8:9266247 | Cec10g1946 | Cec-Chr10:34281072 | 9.00E-35 | dispersed | |
Cec08g0349 | Cec-Chr8:9266247 | Cec08g0350 | Cec-Chr8:9606595 | 2.10E-92 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30014 | PF13837 | Myb_DNA-bind_4 | 2.90E-21 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0349 | - | - | - | 0.0 |