Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0350 ATGGATGTCGACTCCGGCGAGGCAGTGGTGACAGAGGCGGGGGAAGCTCATGAAGTTGGCAACGGCGACGGCAGTGGCGGAAGCGGATCGAATTCCGGCGAAGAAGATAAAGGGTCATCTTTGTTGTTGTTTGAAGATGGTGAGAAGAATTTTGGTGGGAACAGGTGGCCAAGACAAGAGACTTTGGCTTTGTTGAAGATAAGATCTGATATGGATGCAATTTTTAGAGATGCAACTCATAAAGCTCCATTGTGGGATGAAGTTTCAAGGAAATTAGGAGAGCTGGGATTCAATCGAACTCCAAAGAAGTGCAAGGAGAAATTTGAGAATGTTTATAAGTATCACAAGAGAACCAAAGATGTTCGAAGTGGGAAATCCGATAATAGCAAAAAAGTTTATAGATTTTCAGATGAATTGGAGGCTTTTGATCACCATAATAGCCATCACCAAAATCACATTTTATTCCAATCTCACCACCACCAGCCGCCGCAGCCGCCACCACTGCCGCCAGTTCCTCCGACGACGACGACAACAACACCGCCTCCAGTGATGAAAACAGTCAACTCTACTGTTTCATCCACCATGAACACTACAACAACAAACAACAACTCTTTGCCACCAAAGTCTTCCAATAACCCTCTTTCCAATTTGCCAAACATGGCTGCCAATGTGATGTTTTCGAGCTCCACTTCATCGTCGACGGCGTCGGAGGAAGATCCATTTCGGAGTAGCAGGAGGAGGACGAAGAAGAGGAAGTGGAGTGATTTCTTCTTGAGATTAACAAAGGAGGTAATAGAGAAGCAAGAAGGGCTTCAATTAAAGTTCCTAGAAGCCTTGGAGAGAATAGAGAATCAAAGGAAATTGAGAGATGAAGCATGGAGAATGAAAGAAATGAAAAGGGTTAATCAAGAACATGAAGTTTTAGTTCAAGAGATGTCCATGGCCGCCGCGAAAGATGCAGCCGTCGTCGCATTTTTGCAAAAGATAGCTCCATCTTCGGCTCCGCCACCGCCACCGCCACCGCCACCAATGACAACTCAGTCGCAAAACAACGAGAATAACGGAAAGATGACGTCCGTAATCCCGACGACGACAAATGGAAAGGTGAGCAGCATTGGAGGAAGCCCTTCAAGATGGCCAAAAGGTGAAGTTGAAGCTTTGATAAGACTAAGGACAGAAATGGAAATGAAATATCAAGAGAATGGGCCAAAAGGGTTATTATGGGAGGAGATTTCAGCAGCAATGAGAGGGCTTGGATACAATAGAAGCTCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAAAAGGTGAAAGATAGCAACAAGAAGAGAGCAGAAGATTCCAAGACATGTCCTTACTTTCATCAATTAGATGCTCTTTATAGAGAGAAAGAAAAAAATATGAATAATTTTGATATCAATAGCCAAATGGAGCCATTGATGGTTGAACCAGAACAACAATGGCCACCTCCATTTCAAGCCAATAATCAAATCATGGGAAGATTACAAAGAATAAATGATGAAGGAAATCAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGAGGAAGTAGTAGCACAGATGTGGAAGATTGA 1632 42.83 MDVDSGEAVVTEAGEAHEVGNGDGSGGSGSNSGEEDKGSSLLLFEDGEKNFGGNRWPRQETLALLKIRSDMDAIFRDATHKAPLWDEVSRKLGELGFNRTPKKCKEKFENVYKYHKRTKDVRSGKSDNSKKVYRFSDELEAFDHHNSHHQNHILFQSHHHQPPQPPPLPPVPPTTTTTTPPPVMKTVNSTVSSTMNTTTTNNNSLPPKSSNNPLSNLPNMAANVMFSSSTSSSTASEEDPFRSSRRRTKKRKWSDFFLRLTKEVIEKQEGLQLKFLEALERIENQRKLRDEAWRMKEMKRVNQEHEVLVQEMSMAAAKDAAVVAFLQKIAPSSAPPPPPPPPPMTTQSQNNENNGKMTSVIPTTTNGKVSSIGGSPSRWPKGEVEALIRLRTEMEMKYQENGPKGLLWEEISAAMRGLGYNRSSKRCKEKWENINKYFKKVKDSNKKRAEDSKTCPYFHQLDALYREKEKNMNNFDINSQMEPLMVEPEQQWPPPFQANNQIMGRLQRINDEGNQEEDEEEEEEEEEEEEEEDGGSSSTDVED 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9606595 9608822 - CePI673135_08g003500.1 Cec08g0350 208992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0350 543 PANTHER FI21293P1 28 522 - -
Cec08g0350 543 ProSiteProfiles Myb-like domain profile. 48 112 IPR001005 -
Cec08g0350 543 MobiDBLite consensus disorder prediction 160 179 - -
Cec08g0350 543 Gene3D - 56 117 - -
Cec08g0350 543 Gene3D - 379 440 - -
Cec08g0350 543 FunFam Trihelix transcription factor GT-2 56 117 - -
Cec08g0350 543 Coils Coil 503 534 - -
Cec08g0350 543 ProSiteProfiles Myb-like domain profile. 377 435 IPR001005 -
Cec08g0350 543 MobiDBLite consensus disorder prediction 180 238 - -
Cec08g0350 543 MobiDBLite consensus disorder prediction 331 346 - -
Cec08g0350 543 MobiDBLite consensus disorder prediction 331 378 - -
Cec08g0350 543 MobiDBLite consensus disorder prediction 490 543 - -
Cec08g0350 543 MobiDBLite consensus disorder prediction 513 543 - -
Cec08g0350 543 MobiDBLite consensus disorder prediction 155 249 - -
Cec08g0350 543 MobiDBLite consensus disorder prediction 493 508 - -
Cec08g0350 543 CDD GT1 377 442 - -
Cec08g0350 543 FunFam Trihelix transcription factor GT-2 379 440 - -
Cec08g0350 543 Pfam Myb/SANT-like DNA-binding domain 54 134 IPR044822 -
Cec08g0350 543 Pfam Myb/SANT-like DNA-binding domain 377 464 IPR044822 -
Cec08g0350 543 SMART sant 52 114 IPR001005 -
Cec08g0350 543 SMART sant 375 437 IPR001005 -
Cec08g0350 543 MobiDBLite consensus disorder prediction 1 52 - -
Cec08g0350 543 CDD GT1 54 119 - -
Cec08g0350 543 MobiDBLite consensus disorder prediction 347 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0350 Cec-Chr8:9606595 Cec10g1946 Cec-Chr10:34281072 3.70E-21 dispersed
Cec08g0349 Cec-Chr8:9266247 Cec08g0350 Cec-Chr8:9606595 2.10E-92 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30015 PF13837 Myb_DNA-bind_4 4.00E-22 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0350 - - - 0.0