Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0350 | ATGGATGTCGACTCCGGCGAGGCAGTGGTGACAGAGGCGGGGGAAGCTCATGAAGTTGGCAACGGCGACGGCAGTGGCGGAAGCGGATCGAATTCCGGCGAAGAAGATAAAGGGTCATCTTTGTTGTTGTTTGAAGATGGTGAGAAGAATTTTGGTGGGAACAGGTGGCCAAGACAAGAGACTTTGGCTTTGTTGAAGATAAGATCTGATATGGATGCAATTTTTAGAGATGCAACTCATAAAGCTCCATTGTGGGATGAAGTTTCAAGGAAATTAGGAGAGCTGGGATTCAATCGAACTCCAAAGAAGTGCAAGGAGAAATTTGAGAATGTTTATAAGTATCACAAGAGAACCAAAGATGTTCGAAGTGGGAAATCCGATAATAGCAAAAAAGTTTATAGATTTTCAGATGAATTGGAGGCTTTTGATCACCATAATAGCCATCACCAAAATCACATTTTATTCCAATCTCACCACCACCAGCCGCCGCAGCCGCCACCACTGCCGCCAGTTCCTCCGACGACGACGACAACAACACCGCCTCCAGTGATGAAAACAGTCAACTCTACTGTTTCATCCACCATGAACACTACAACAACAAACAACAACTCTTTGCCACCAAAGTCTTCCAATAACCCTCTTTCCAATTTGCCAAACATGGCTGCCAATGTGATGTTTTCGAGCTCCACTTCATCGTCGACGGCGTCGGAGGAAGATCCATTTCGGAGTAGCAGGAGGAGGACGAAGAAGAGGAAGTGGAGTGATTTCTTCTTGAGATTAACAAAGGAGGTAATAGAGAAGCAAGAAGGGCTTCAATTAAAGTTCCTAGAAGCCTTGGAGAGAATAGAGAATCAAAGGAAATTGAGAGATGAAGCATGGAGAATGAAAGAAATGAAAAGGGTTAATCAAGAACATGAAGTTTTAGTTCAAGAGATGTCCATGGCCGCCGCGAAAGATGCAGCCGTCGTCGCATTTTTGCAAAAGATAGCTCCATCTTCGGCTCCGCCACCGCCACCGCCACCGCCACCAATGACAACTCAGTCGCAAAACAACGAGAATAACGGAAAGATGACGTCCGTAATCCCGACGACGACAAATGGAAAGGTGAGCAGCATTGGAGGAAGCCCTTCAAGATGGCCAAAAGGTGAAGTTGAAGCTTTGATAAGACTAAGGACAGAAATGGAAATGAAATATCAAGAGAATGGGCCAAAAGGGTTATTATGGGAGGAGATTTCAGCAGCAATGAGAGGGCTTGGATACAATAGAAGCTCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAAAAGGTGAAAGATAGCAACAAGAAGAGAGCAGAAGATTCCAAGACATGTCCTTACTTTCATCAATTAGATGCTCTTTATAGAGAGAAAGAAAAAAATATGAATAATTTTGATATCAATAGCCAAATGGAGCCATTGATGGTTGAACCAGAACAACAATGGCCACCTCCATTTCAAGCCAATAATCAAATCATGGGAAGATTACAAAGAATAAATGATGAAGGAAATCAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGAGGAAGTAGTAGCACAGATGTGGAAGATTGA | 1632 | 42.83 | MDVDSGEAVVTEAGEAHEVGNGDGSGGSGSNSGEEDKGSSLLLFEDGEKNFGGNRWPRQETLALLKIRSDMDAIFRDATHKAPLWDEVSRKLGELGFNRTPKKCKEKFENVYKYHKRTKDVRSGKSDNSKKVYRFSDELEAFDHHNSHHQNHILFQSHHHQPPQPPPLPPVPPTTTTTTPPPVMKTVNSTVSSTMNTTTTNNNSLPPKSSNNPLSNLPNMAANVMFSSSTSSSTASEEDPFRSSRRRTKKRKWSDFFLRLTKEVIEKQEGLQLKFLEALERIENQRKLRDEAWRMKEMKRVNQEHEVLVQEMSMAAAKDAAVVAFLQKIAPSSAPPPPPPPPPMTTQSQNNENNGKMTSVIPTTTNGKVSSIGGSPSRWPKGEVEALIRLRTEMEMKYQENGPKGLLWEEISAAMRGLGYNRSSKRCKEKWENINKYFKKVKDSNKKRAEDSKTCPYFHQLDALYREKEKNMNNFDINSQMEPLMVEPEQQWPPPFQANNQIMGRLQRINDEGNQEEDEEEEEEEEEEEEEEDGGSSSTDVED | 543 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9606595 | 9608822 | - | CePI673135_08g003500.1 | Cec08g0350 | 208992 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0350 | 543 | PANTHER | FI21293P1 | 28 | 522 | - | - | |
Cec08g0350 | 543 | ProSiteProfiles | Myb-like domain profile. | 48 | 112 | IPR001005 | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 160 | 179 | - | - | |
Cec08g0350 | 543 | Gene3D | - | 56 | 117 | - | - | |
Cec08g0350 | 543 | Gene3D | - | 379 | 440 | - | - | |
Cec08g0350 | 543 | FunFam | Trihelix transcription factor GT-2 | 56 | 117 | - | - | |
Cec08g0350 | 543 | Coils | Coil | 503 | 534 | - | - | |
Cec08g0350 | 543 | ProSiteProfiles | Myb-like domain profile. | 377 | 435 | IPR001005 | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 180 | 238 | - | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 331 | 346 | - | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 331 | 378 | - | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 490 | 543 | - | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 513 | 543 | - | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 155 | 249 | - | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 493 | 508 | - | - | |
Cec08g0350 | 543 | CDD | GT1 | 377 | 442 | - | - | |
Cec08g0350 | 543 | FunFam | Trihelix transcription factor GT-2 | 379 | 440 | - | - | |
Cec08g0350 | 543 | Pfam | Myb/SANT-like DNA-binding domain | 54 | 134 | IPR044822 | - | |
Cec08g0350 | 543 | Pfam | Myb/SANT-like DNA-binding domain | 377 | 464 | IPR044822 | - | |
Cec08g0350 | 543 | SMART | sant | 52 | 114 | IPR001005 | - | |
Cec08g0350 | 543 | SMART | sant | 375 | 437 | IPR001005 | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Cec08g0350 | 543 | CDD | GT1 | 54 | 119 | - | - | |
Cec08g0350 | 543 | MobiDBLite | consensus disorder prediction | 347 | 373 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g0350 | Cec-Chr8:9606595 | Cec10g1946 | Cec-Chr10:34281072 | 3.70E-21 | dispersed | |
Cec08g0349 | Cec-Chr8:9266247 | Cec08g0350 | Cec-Chr8:9606595 | 2.10E-92 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30015 | PF13837 | Myb_DNA-bind_4 | 4.00E-22 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0350 | - | - | - | 0.0 |