Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0461 ATGATGTTCTTCTGGACGAAGAACAATTCGTCAAATCTCAACTTATTGTTCTTCTCAGAGCTCCAATTCCTTTTCAGTAAATCGATTATGTTCATTCAGGTTTCGTGTGGCGAATTTGATCATTCATTCTGGCGCTCTTTTTTTTTTTTCAAAATGTTCACAACGGCGTCGGCTGTGGAATTGCGTGGTTCTGACTGTTTGGTAGGTCTGGAGTGCTTCCTTAACGTTGTTAGGGCCCTCGGAATGGGATCATGCCTCTCTGGGGACCGGAACAAGCGAACGATCCCTTATTCTGAGCTTGCTTCCACTTCTCGTGATGATGGCGTTATTAGGCGAAGGAATTCCAAGAGGAAGATTACGAGAAAGGGTTCTTCCCCCTCGAATGACTCTTCAAGGGAGATGTCGCTTCATCGAGTTCCCGGCCGGATGTTTTTGAATGGAACAACTGATCATGCCTCGCTCTTTACTAGGCAAGGCAAGAAAGGCGTCAATCAGGATGCTATGATTGTTTGGGAGAATTTTGGTTCAAAAGAAGATACAATATTTTGTGGAGTCTTTGATGGACACGGTCCCTTTGGCCATATGGTTGCAAAGAAAGTCAGAGATTCTCTTCCTCTAAAACTGAATGCTCAGTGGGAGTTGGATGCTACCAGAAAGGAAGGGCAAAATGACATCAGATGTCAAGTGTCTCCACCAATGCTGGTTAACAAGGACTCTGGAACCTCTCATTGTGATCCTGGTCATCAGGGAAGTTACAGTGACATTTATATCATGCTGAAAGAGTCTTTTCTAAAGGCTTTTAAGGTGATGGACAAGGAGCTTAAACTACATCCATATATCGATTGCTATACCAGTGGTACAACATCAGTTGCATTGGTCAAACAGGGTCGGGATCTTATCATTGGAAATGTTGGGGACTCGCGGGCTGTTTTAGGTACCAGAGATGAATCTAACTCTCTCATTGCAGTTCAGTTGACTGTGGACCTCAAGCCAAATCTTCCAAGGGAAGCTGAAAGGATCAGACTTTGCAAAGGAAGAATCTTTGCTCTTCAAAATGAGCCTGAGATTTTTCGGGTTTGGCTTCCCAACAATGATTCTCCTGGGCTTGCTATGGCCAGAGCCTTCGGAGATTTCTGTTTGAAAGATTTTGGTGTGATAGCCGTGCCTGATGTTTCTTATTGTCATCTTACTGAGAACGATGAGTTTGTGGTACTGGCTACCGATGGGGTTTGGGATGTTCTCTCAAACGAAGAGGTTGTGGCAATTGTTGCATCATCTCCGAGATCTTCTGCAGCTCGTATCCTTGTGGACTCAGCTACTCGAGCATGGAGAATAAAGTACCCTACTGCCAAGGTGGATGATTGTGCCGTAGTCTGCCTGTACCTGGACTCTAATGAAAGTACTGCAGTGACAGCTAAAGAAAAGGAGTTCACCAATGACATGGAAACTTAG 1452 44.56 MMFFWTKNNSSNLNLLFFSELQFLFSKSIMFIQVSCGEFDHSFWRSFFFFKMFTTASAVELRGSDCLVGLECFLNVVRALGMGSCLSGDRNKRTIPYSELASTSRDDGVIRRRNSKRKITRKGSSPSNDSSREMSLHRVPGRMFLNGTTDHASLFTRQGKKGVNQDAMIVWENFGSKEDTIFCGVFDGHGPFGHMVAKKVRDSLPLKLNAQWELDATRKEGQNDIRCQVSPPMLVNKDSGTSHCDPGHQGSYSDIYIMLKESFLKAFKVMDKELKLHPYIDCYTSGTTSVALVKQGRDLIIGNVGDSRAVLGTRDESNSLIAVQLTVDLKPNLPREAERIRLCKGRIFALQNEPEIFRVWLPNNDSPGLAMARAFGDFCLKDFGVIAVPDVSYCHLTENDEFVVLATDGVWDVLSNEEVVAIVASSPRSSAARILVDSATRAWRIKYPTAKVDDCAVVCLYLDSNESTAVTAKEKEFTNDMET 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13581212 13585381 - CePI673135_08g004610.1 Cec08g0461 209103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0461 483 PANTHER PROTEIN PHOSPHATASE 127 460 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec08g0461 483 SUPERFAMILY PP2C-like 150 463 IPR036457 -
Cec08g0461 483 MobiDBLite consensus disorder prediction 111 135 - -
Cec08g0461 483 ProSiteProfiles PPM-type phosphatase domain profile. 151 462 IPR001932 -
Cec08g0461 483 Pfam Protein phosphatase 2C 163 436 IPR001932 -
Cec08g0461 483 Gene3D - 146 464 IPR036457 -
Cec08g0461 483 SMART PP2C_4 140 460 IPR001932 -
Cec08g0461 483 CDD PP2Cc 151 462 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0461 Cec-Chr8:13581212 Cec11g0982 Cec-Chr11:16328819 2.20E-134 dispersed
Cec08g0461 Cec-Chr8:13581212 Cec02g1820 Cec-Chr2:36009078 1.30E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0461 - - - 0.0