Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0512 ATGAACCTCACTACTCTTGTTTTCTGGATCATCCAGATCTCCATCCATGCAGTTCCAGTTTTTTCTAAAACCAAAGCGCCAGACGTTTCTGCATTGAATGTGATGTTTAGTAGTTTAAATTCACCTTCACAACTCTCTGGTTGGGGTTCAAGTGGGGGTGATCCATGTGGGGATTCTTGGGGAGGGATCCAATGCTCAGGATCATCTGTCACTGAAATAAGTTTATCAGACTTTGGACTAAGTGGTTCAATGGGTTACCAGCTTTCAAATTTGGCAACTGTCACCTACTTTGATTTGAGCAAGAACAACCTCAATGGTGATATCCCCTATCAACTTCCCCCCAATGCAGTTCACATCGATCTTTCTGGGAACAGCTTCACTGGTAGTGTGCCTTATTCAATTTCTCAGATGGCTGATCTTGAATTTTTAAATCTTGGTCATAATAAGCTTAGCAACCAATTGAGTGACATGTTTGGCAAGCTTTCTAAACTGAAAAGGATGGATCTCTCATACAACTCAATTTCAGGAAACTTACCTCAAAGTTTTAAGAAGCTTTCAAGCCTTACAATATTGCATATACAAGATAATAAATTTTCAGGTTCAATCAATGTTCTTGCTGACCTTCCACTTGATGATTTGAATGTTGCAAATAACAAATTCACCGGATGGATTCCTGAAAGTCTTGAAGATATAGATAATTTGGAAACTGTAGGAAATTCATGGTCATCTGGGCCAGCACCACCTCCACCACCAGGGACGGTATCTCCGAAAGGCAAGAACTCGAAGAAGGACGAGTCGAACGGGAAATCGTCGGTGATAAGTGGGTTAGTGATAGCAGGAATAGCCATGGGAGTTTTAGCAATAATAGCAATAGTGATTGGATTTATGTCAATAAGGCATAAATCCTTCACTCCTTCCCATTTTCTTGATGAAGACACAAGCCAACACAGATCCTTCACTCCACTCACATCCCAGGAACTCCCAAAGGGAAATTTGTACAATAATAATAATGCTAATAATAATACTAATAATGATAGAAAATCCTTCAATTCTGATGCCTCTGTTGACATAAAAGGTCTAAGTGTTGTTAGGCCACCTCCAGCTCCTTCTGATCCTGTTCAATCCTTCAGTGATAATCAATTTGCAAGCCGTTTGAATTCAAGGAGAAGCACTTCCTTTCGTGCCATTTCTTATTCTTTACTTGATTTGCAAACTGCCACTTCCAATTTTGCCCCTGCTCGCCTTCTCGGTGAGGGTACGATCGGACGTGTTTATAAGGCTAAGTATGGAGATGGAAAGGTATTGGCAGTGAAGAAGATAGATTCATCAGTTTTTCAAGGTAGAAGAAGAGAGGAGTTTGGTGAAGTAGTTGGAATAATCTCAAAGCTTCATCACACAAACATTACAGAAGTGGTTGGGTTTTGTTCAGAGCAACGACATCATTTGCTGGTTTATGAATATTTCATGAATGGTTCACTTCATGAGTTTCTTCATATGTCTGATGACTTTAGTAAACCACTCACTTGGAACACTAGAGTCAGAATTGCTTTGGGGACTGCAAGAGCTCTTGAGTATCTTCACGAAGTTTGCTCACCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTGCTTGATGCGGAACTTAATCCTCGTCTCTCAGATTATGGTTTGGCAACATTTTATAAGCATAGAAGCCAAAACCCTGGAGGTGGATATGATGCTCCAGAATGCCTAAAGGGTTCAAGTTATACAATGAAGAGTGATATTTACAGTTTGGGAGTGGTAATGTTGGAATTGTTGACGGGGCGGATGCCTTATGACTCTGGGAAAGCCAAAGTGGAACAATGTCTAGTAAGATGGGCAACACCACAGCTACATGACATAGATGCATTGGACAAAATGGTGGATCCTGCCTTGCGAGGTTTATATCCTCCAAAATCAGTGTCTAGATTTGCAGATATCATTGCCCTTTGCGTTCAATCAGAGCCTGAATTTAGGCCTCCCATGTCCGAAGTGGTTCAAGCCTTGGTTACTTTGGTTCAACGATCAAGCATGAATATGAGAGATGATCTTGGAAACTCTCGACGAATGGATGATTATGACTATTAA 2115 40.52 MNLTTLVFWIIQISIHAVPVFSKTKAPDVSALNVMFSSLNSPSQLSGWGSSGGDPCGDSWGGIQCSGSSVTEISLSDFGLSGSMGYQLSNLATVTYFDLSKNNLNGDIPYQLPPNAVHIDLSGNSFTGSVPYSISQMADLEFLNLGHNKLSNQLSDMFGKLSKLKRMDLSYNSISGNLPQSFKKLSSLTILHIQDNKFSGSINVLADLPLDDLNVANNKFTGWIPESLEDIDNLETVGNSWSSGPAPPPPPGTVSPKGKNSKKDESNGKSSVISGLVIAGIAMGVLAIIAIVIGFMSIRHKSFTPSHFLDEDTSQHRSFTPLTSQELPKGNLYNNNNANNNTNNDRKSFNSDASVDIKGLSVVRPPPAPSDPVQSFSDNQFASRLNSRRSTSFRAISYSLLDLQTATSNFAPARLLGEGTIGRVYKAKYGDGKVLAVKKIDSSVFQGRRREEFGEVVGIISKLHHTNITEVVGFCSEQRHHLLVYEYFMNGSLHEFLHMSDDFSKPLTWNTRVRIALGTARALEYLHEVCSPSIIHMNIKSSNILLDAELNPRLSDYGLATFYKHRSQNPGGGYDAPECLKGSSYTMKSDIYSLGVVMLELLTGRMPYDSGKAKVEQCLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSSMNMRDDLGNSRRMDDYDY 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15060697 15069481 - CePI673135_08g005120.1 Cec08g0512 209154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0512 704 ProSiteProfiles Protein kinase domain profile. 410 681 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g0512 704 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 488 692 - -
Cec08g0512 704 Gene3D Transferase(Phosphotransferase) domain 1 488 701 - -
Cec08g0512 704 SUPERFAMILY Protein kinase-like (PK-like) 390 678 IPR011009 -
Cec08g0512 704 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Cec08g0512 704 MobiDBLite consensus disorder prediction 311 350 - -
Cec08g0512 704 SUPERFAMILY L domain-like 27 236 - -
Cec08g0512 704 MobiDBLite consensus disorder prediction 235 269 - -
Cec08g0512 704 Pfam Protein kinase domain 413 676 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g0512 704 Gene3D Phosphorylase Kinase; domain 1 374 487 - -
Cec08g0512 704 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 252 - -
Cec08g0512 704 Pfam Leucine Rich Repeat 118 137 IPR001611 GO:0005515(InterPro)
Cec08g0512 704 Pfam Leucine rich repeat 156 198 IPR001611 GO:0005515(InterPro)
Cec08g0512 704 MobiDBLite consensus disorder prediction 315 350 - -
Cec08g0512 704 Gene3D Ribonuclease Inhibitor 25 255 IPR032675 -
Cec08g0512 704 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 487 - -
Cec08g0512 704 PANTHER LEUCINE RICH REPEAT KINASE 2 268 680 IPR051420 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0983 Cec-Chr1:13367733 Cec08g0512 Cec-Chr8:15060697 8.00E-133 dispersed
Cec08g0512 Cec-Chr8:15060697 Cec09g0147 Cec-Chr9:1305249 3.70E-130 dispersed
Cec08g0512 Cec-Chr8:15060697 Cec07g1541 Cec-Chr7:30982735 3.90E-164 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72179 PF00069 Pkinase 1.10E-43 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0512 - - - 0.0