Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0512 | ATGAACCTCACTACTCTTGTTTTCTGGATCATCCAGATCTCCATCCATGCAGTTCCAGTTTTTTCTAAAACCAAAGCGCCAGACGTTTCTGCATTGAATGTGATGTTTAGTAGTTTAAATTCACCTTCACAACTCTCTGGTTGGGGTTCAAGTGGGGGTGATCCATGTGGGGATTCTTGGGGAGGGATCCAATGCTCAGGATCATCTGTCACTGAAATAAGTTTATCAGACTTTGGACTAAGTGGTTCAATGGGTTACCAGCTTTCAAATTTGGCAACTGTCACCTACTTTGATTTGAGCAAGAACAACCTCAATGGTGATATCCCCTATCAACTTCCCCCCAATGCAGTTCACATCGATCTTTCTGGGAACAGCTTCACTGGTAGTGTGCCTTATTCAATTTCTCAGATGGCTGATCTTGAATTTTTAAATCTTGGTCATAATAAGCTTAGCAACCAATTGAGTGACATGTTTGGCAAGCTTTCTAAACTGAAAAGGATGGATCTCTCATACAACTCAATTTCAGGAAACTTACCTCAAAGTTTTAAGAAGCTTTCAAGCCTTACAATATTGCATATACAAGATAATAAATTTTCAGGTTCAATCAATGTTCTTGCTGACCTTCCACTTGATGATTTGAATGTTGCAAATAACAAATTCACCGGATGGATTCCTGAAAGTCTTGAAGATATAGATAATTTGGAAACTGTAGGAAATTCATGGTCATCTGGGCCAGCACCACCTCCACCACCAGGGACGGTATCTCCGAAAGGCAAGAACTCGAAGAAGGACGAGTCGAACGGGAAATCGTCGGTGATAAGTGGGTTAGTGATAGCAGGAATAGCCATGGGAGTTTTAGCAATAATAGCAATAGTGATTGGATTTATGTCAATAAGGCATAAATCCTTCACTCCTTCCCATTTTCTTGATGAAGACACAAGCCAACACAGATCCTTCACTCCACTCACATCCCAGGAACTCCCAAAGGGAAATTTGTACAATAATAATAATGCTAATAATAATACTAATAATGATAGAAAATCCTTCAATTCTGATGCCTCTGTTGACATAAAAGGTCTAAGTGTTGTTAGGCCACCTCCAGCTCCTTCTGATCCTGTTCAATCCTTCAGTGATAATCAATTTGCAAGCCGTTTGAATTCAAGGAGAAGCACTTCCTTTCGTGCCATTTCTTATTCTTTACTTGATTTGCAAACTGCCACTTCCAATTTTGCCCCTGCTCGCCTTCTCGGTGAGGGTACGATCGGACGTGTTTATAAGGCTAAGTATGGAGATGGAAAGGTATTGGCAGTGAAGAAGATAGATTCATCAGTTTTTCAAGGTAGAAGAAGAGAGGAGTTTGGTGAAGTAGTTGGAATAATCTCAAAGCTTCATCACACAAACATTACAGAAGTGGTTGGGTTTTGTTCAGAGCAACGACATCATTTGCTGGTTTATGAATATTTCATGAATGGTTCACTTCATGAGTTTCTTCATATGTCTGATGACTTTAGTAAACCACTCACTTGGAACACTAGAGTCAGAATTGCTTTGGGGACTGCAAGAGCTCTTGAGTATCTTCACGAAGTTTGCTCACCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTGCTTGATGCGGAACTTAATCCTCGTCTCTCAGATTATGGTTTGGCAACATTTTATAAGCATAGAAGCCAAAACCCTGGAGGTGGATATGATGCTCCAGAATGCCTAAAGGGTTCAAGTTATACAATGAAGAGTGATATTTACAGTTTGGGAGTGGTAATGTTGGAATTGTTGACGGGGCGGATGCCTTATGACTCTGGGAAAGCCAAAGTGGAACAATGTCTAGTAAGATGGGCAACACCACAGCTACATGACATAGATGCATTGGACAAAATGGTGGATCCTGCCTTGCGAGGTTTATATCCTCCAAAATCAGTGTCTAGATTTGCAGATATCATTGCCCTTTGCGTTCAATCAGAGCCTGAATTTAGGCCTCCCATGTCCGAAGTGGTTCAAGCCTTGGTTACTTTGGTTCAACGATCAAGCATGAATATGAGAGATGATCTTGGAAACTCTCGACGAATGGATGATTATGACTATTAA | 2115 | 40.52 | MNLTTLVFWIIQISIHAVPVFSKTKAPDVSALNVMFSSLNSPSQLSGWGSSGGDPCGDSWGGIQCSGSSVTEISLSDFGLSGSMGYQLSNLATVTYFDLSKNNLNGDIPYQLPPNAVHIDLSGNSFTGSVPYSISQMADLEFLNLGHNKLSNQLSDMFGKLSKLKRMDLSYNSISGNLPQSFKKLSSLTILHIQDNKFSGSINVLADLPLDDLNVANNKFTGWIPESLEDIDNLETVGNSWSSGPAPPPPPGTVSPKGKNSKKDESNGKSSVISGLVIAGIAMGVLAIIAIVIGFMSIRHKSFTPSHFLDEDTSQHRSFTPLTSQELPKGNLYNNNNANNNTNNDRKSFNSDASVDIKGLSVVRPPPAPSDPVQSFSDNQFASRLNSRRSTSFRAISYSLLDLQTATSNFAPARLLGEGTIGRVYKAKYGDGKVLAVKKIDSSVFQGRRREEFGEVVGIISKLHHTNITEVVGFCSEQRHHLLVYEYFMNGSLHEFLHMSDDFSKPLTWNTRVRIALGTARALEYLHEVCSPSIIHMNIKSSNILLDAELNPRLSDYGLATFYKHRSQNPGGGYDAPECLKGSSYTMKSDIYSLGVVMLELLTGRMPYDSGKAKVEQCLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSSMNMRDDLGNSRRMDDYDY | 704 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 15060697 | 15069481 | - | CePI673135_08g005120.1 | Cec08g0512 | 209154 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0512 | 704 | ProSiteProfiles | Protein kinase domain profile. | 410 | 681 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g0512 | 704 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 488 | 692 | - | - | |
Cec08g0512 | 704 | Gene3D | Transferase(Phosphotransferase) domain 1 | 488 | 701 | - | - | |
Cec08g0512 | 704 | SUPERFAMILY | Protein kinase-like (PK-like) | 390 | 678 | IPR011009 | - | |
Cec08g0512 | 704 | Pfam | Leucine rich repeat N-terminal domain | 27 | 66 | IPR013210 | - | |
Cec08g0512 | 704 | MobiDBLite | consensus disorder prediction | 311 | 350 | - | - | |
Cec08g0512 | 704 | SUPERFAMILY | L domain-like | 27 | 236 | - | - | |
Cec08g0512 | 704 | MobiDBLite | consensus disorder prediction | 235 | 269 | - | - | |
Cec08g0512 | 704 | Pfam | Protein kinase domain | 413 | 676 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g0512 | 704 | Gene3D | Phosphorylase Kinase; domain 1 | 374 | 487 | - | - | |
Cec08g0512 | 704 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 25 | 252 | - | - | |
Cec08g0512 | 704 | Pfam | Leucine Rich Repeat | 118 | 137 | IPR001611 | GO:0005515(InterPro) | |
Cec08g0512 | 704 | Pfam | Leucine rich repeat | 156 | 198 | IPR001611 | GO:0005515(InterPro) | |
Cec08g0512 | 704 | MobiDBLite | consensus disorder prediction | 315 | 350 | - | - | |
Cec08g0512 | 704 | Gene3D | Ribonuclease Inhibitor | 25 | 255 | IPR032675 | - | |
Cec08g0512 | 704 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 376 | 487 | - | - | |
Cec08g0512 | 704 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 268 | 680 | IPR051420 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0983 | Cec-Chr1:13367733 | Cec08g0512 | Cec-Chr8:15060697 | 8.00E-133 | dispersed | |
Cec08g0512 | Cec-Chr8:15060697 | Cec09g0147 | Cec-Chr9:1305249 | 3.70E-130 | dispersed | |
Cec08g0512 | Cec-Chr8:15060697 | Cec07g1541 | Cec-Chr7:30982735 | 3.90E-164 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72179 | PF00069 | Pkinase | 1.10E-43 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0512 | - | - | - | 0.0 |