Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0522 | ATGAGCTCCAATCATTTAGAGATGATGAGCAACCATTTTACAGTGGAGAACTCCAATCAAAGTGATCATCAAGGACCAATCAGCTCCATTAATCCTTTTTTCACTGAGAGCTTTTGTCTTGAAAAGTTTGCTTATTTTAATGAAATCCCTAGCTGTGTTCCACCTCCTCTTTACTCTTCATTTCCTACATTTAACAGAGAAGATCCCAAGAGGTTGGGAGGAAGAAAGAGGAAAAGAGAAAATGAAAGGGATGAGGAGAAGCCAAAAGAAGTGATTCATGTGCGGGCAAAAAGAGGTGAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTAAGAAGAGAGAAAATAAACCAGAGGCTGAGGTTCTTACAGGACTTGGTTCCAGGATGCTACAAGACAATGGGAATGGCAGTTATGTTGGATGTGATCATAAATTACATCCAATCTCTCCAGAATCAGATTGAGTTTCTGTCCATGAAGCTTTCAGTTGCTAGTCGCTACTATGATTTCAACAACAGCTCGGAGACTAATGGCGCCGAGATAATGCAGGCAACAAATGGGTGTGATGATATTCAAGAGATGCAGAGGATTGTACTTAGAGAAGAAGGGTATGGAGGGCCCTCTTACCACCACTCTACTTTTCCACCTCTCTAA | 654 | 41.44 | MSSNHLEMMSNHFTVENSNQSDHQGPISSINPFFTESFCLEKFAYFNEIPSCVPPPLYSSFPTFNREDPKRLGGRKRKRENERDEEKPKEVIHVRAKRGEATDSHSLAERVRREKINQRLRFLQDLVPGCYKTMGMAVMLDVIINYIQSLQNQIEFLSMKLSVASRYYDFNNSSETNGAEIMQATNGCDDIQEMQRIVLREEGYGGPSYHHSTFPPL | 217 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 15403935 | 15409741 | + | CePI673135_08g005220.1 | Cec08g0522 | 209164 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0522 | 217 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 75 | 176 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Cec08g0522 | 217 | CDD | bHLH_AtBPE_like | 90 | 174 | - | - | |
Cec08g0522 | 217 | Gene3D | - | 97 | 168 | IPR036638 | GO:0046983(InterPro) | |
Cec08g0522 | 217 | MobiDBLite | consensus disorder prediction | 68 | 90 | - | - | |
Cec08g0522 | 217 | SMART | finulus | 106 | 156 | IPR011598 | GO:0046983(InterPro) | |
Cec08g0522 | 217 | Pfam | Helix-loop-helix DNA-binding domain | 104 | 151 | IPR011598 | GO:0046983(InterPro) | |
Cec08g0522 | 217 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 98 | 169 | IPR036638 | GO:0046983(InterPro) | |
Cec08g0522 | 217 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 100 | 150 | IPR011598 | GO:0046983(InterPro) | |
Cec08g0522 | 217 | MobiDBLite | consensus disorder prediction | 64 | 90 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1653 | Cec-Chr1:31186710 | Cec08g0522 | Cec-Chr8:15403935 | 1.40E-37 | dispersed | |
Cec05g1325 | Cec-Chr5:13741522 | Cec08g0522 | Cec-Chr8:15403935 | 3.00E-31 | dispersed | |
Cec08g0522 | Cec-Chr8:15403935 | Cec09g0837 | Cec-Chr9:7777346 | 1.10E-27 | dispersed | |
Cec08g0522 | Cec-Chr8:15403935 | Cec06g1678 | Cec-Chr6:30365947 | 1.90E-37 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30021 | PF00010 | HLH | 6.40E-06 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0522 | - | - | - | 0.0 |