Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0536 ATGGTTTACTCCGACAAAATGCAAGAAATTTCATCCAAAATGGGTTTCACACTCTCCGATTTCGCCGATACTTTGGAACAAGAACGCCGTAAAGTCCTCATGTTTCAGCGCGAGCTCCCTCTCTGTTTGCAGCTCGTTTCCCATGCCATTGATTGTTGCAGGCAGCAGTTATCGGAGACGACGACGGAAAATCGTCAATCGGAATGCTCCGAGCAGACTTCCAGTGACATGGGTCCGGTTCTTGAGGAGTTCATTCCGATTAACAGAAATGGGGTTTCTGATTTTGAACAAACGGAGAAAAATAAGAATAACGATGACTCTGATTTACACAATTTGAATTTGGCTCCGTCTGATTGGCTCAGATCTGCTCAGCTTTGGAATCAGACTTCAGATCCTCCTCCCCTGAATCAGGACCAGGCAGAGAACACGCCGGTTGTTGACGTCAACAGAAATGGCGGCGCTTTCCGGCCGTTTCAGAAGGAGAAAACCGGTAGCGCCGGCGGTGGAGGTGGGGCATCCTCGTCTTCAGCTCCGGCTCCTGCTGCGGAAACTAGCTCGACGACGGAGACGGGGTCAGGCGGAAGTAGCCGACGGGAAGAGAAGGAAACGCAGAATCAGAGGAAACAGAGACGGTGCTGGTCGCCGGAGCTGCACCGGCGGTTCCTTCATGCGCTTCAGCAGCTCGGAGGTTCCCATGTGGCGACGCCGAAGCAAATAAGGGAATTGATGAAGGTGGATGGTCTTACCAACGACGAAGTGAAAAGTCATCTACAGAAGTATCGTCTGCACACGAGACGGCCAACTCCGACGATCCACAACAACGAGAGCGGCCACGCGCCTCAGTTCCTGGTGGTTGGCGGCATATGGGTACCGGCGGCGGAGTACGCCGCCATGTCCACCACCACTTCCTCGGGAGAAGCAGTCAGCGCCGCTACCACAAACGGAATTTATGCACCGGTGGCAGCAGCGGCAGCGCCGCATCCATTACCCAGCACAGTACAGAAGCCCAAACCCAAGATCCCTTCCTCCGCAGCCATCGCCGCCGCCGAATCTAATTCTCCGACTACATCTTCCTCTACTCATACGTCTTCAGTTTCACCAGCTGCCTCTTGA 1113 53.91 MVYSDKMQEISSKMGFTLSDFADTLEQERRKVLMFQRELPLCLQLVSHAIDCCRQQLSETTTENRQSECSEQTSSDMGPVLEEFIPINRNGVSDFEQTEKNKNNDDSDLHNLNLAPSDWLRSAQLWNQTSDPPPLNQDQAENTPVVDVNRNGGAFRPFQKEKTGSAGGGGGASSSSAPAPAAETSSTTETGSGGSSRREEKETQNQRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPTPTIHNNESGHAPQFLVVGGIWVPAAEYAAMSTTTSSGEAVSAATTNGIYAPVAAAAAPHPLPSTVQKPKPKIPSSAAIAAAESNSPTTSSSTHTSSVSPAAS 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15915237 15918292 + CePI673135_08g005360.1 Cec08g0536 209178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0536 370 MobiDBLite consensus disorder prediction 126 146 - -
Cec08g0536 370 MobiDBLite consensus disorder prediction 60 77 - -
Cec08g0536 370 MobiDBLite consensus disorder prediction 346 370 - -
Cec08g0536 370 NCBIfam myb-like DNA-binding domain, SHAQKYF class 208 263 IPR006447 GO:0003677(InterPro)
Cec08g0536 370 MobiDBLite consensus disorder prediction 126 212 - -
Cec08g0536 370 MobiDBLite consensus disorder prediction 327 370 - -
Cec08g0536 370 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 342 IPR044787 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0536 370 MobiDBLite consensus disorder prediction 60 80 - -
Cec08g0536 370 MobiDBLite consensus disorder prediction 168 193 - -
Cec08g0536 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 265 IPR017930 -
Cec08g0536 370 Pfam Myb-like DNA-binding domain 210 261 IPR001005 -
Cec08g0536 370 MobiDBLite consensus disorder prediction 194 212 - -
Cec08g0536 370 FunFam Myb family transcription factor 207 265 - -
Cec08g0536 370 SUPERFAMILY Homeodomain-like 206 266 IPR009057 -
Cec08g0536 370 Gene3D - 207 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0536 Cec-Chr8:15915237 Cec11g0279 Cec-Chr11:3051600 5.70E-42 dispersed
Cec05g1705 Cec-Chr5:28339997 Cec08g0536 Cec-Chr8:15915237 3.30E-09 transposed
Cec05g2524 Cec-Chr5:36250793 Cec08g0536 Cec-Chr8:15915237 6.10E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30022 PF00249 Myb_DNA-binding 1.60E-06 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0536 - - - 0.0