Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0581 ATGAAGTTTCTCACATTGCTCTCCCTTTTATTATCACTTCTCACTAAGCTAAAGATCAAGATGGGTGAGAATTCTATTGTGAGTAAGTTGAAGCCTTATATTCTAGTGGTGAGCCTACAATTTGGAATTGCAGGCATATATGTAATATGCATGGCCACTCTCACCAAAGGCATGAGTCGTTATGTTTTGATCGTGTATCGAAACACTGTTGCTGCTCTCTTTCTCGCTCCGTTCGCGCTAATCTTCGAAAGGAAAACAAGACCAAAGATGACACTCCCTGTCGCTTTACAAATCATGGTCTTAGGTTTTCTAGAACCAGTTGTGGATCAAGGGTTTGGTTATCTAGGAATGATGTACACGTCAGCATCATTTGCATCGGCCATCATGAACGCTGTGCCTTCTGTTACCTTTATCATTGCAGTCATTTTTCGGGTGGAGCATCTAAATATAAAACAAGTACGAGGGGTAGCCAAAGTAATTGGCACTTTAGTGACCTTTGCTGGAGCTTTGGTTATGACACTTTACAAAGGCCCAATTCTTGAATTCTTTTGGACACAAAAAACCAACCACCATGTTAACAGCGGCGCCGCCGCAGCCAATCAGCACTGGGTGGCCGGAACTTTGTTCATCCTTCTGGGCTGCGTGTCTTGGTCTTGTTTCTACATATTACAATCTATAACAGTGAAGAGATACCCAGCGGAGCTGTCTCTGTCGGCATTGATATGCTTGGCCGGTGCACTTCAAAGCACAGTGATAGCAGTAGCTATAGAGCATCGTCCTAGCGCATGGGCTGTGGGTTGGGACTCTAGGCTTCTAGCTCCTCTCTATACGGGAATAGTTGGATCAGGAATTGCATATTACTTTCAAGCTATAGTTATGAAGACAAGAGGTCCTGTATTTGTGACGGCTTTCAACCCTTTATGTATGATTGTCGTCACTATTGTCTCCTCTATTGTTCTTGCCGAGAAGATTCATCTTGGAAGCGTGATTGGAGCCATTATCATCGCACTTGGGCTTTATTCAGTCGTTTGGGGAAAAAACAAGGATTATTCCACTGCCGGCAACACCCAAAAGCCTAACGCCGCCGTGTCGGAGCTTCCAATTACTGCCTCTCAACTCCCAACCGAACAAGATGTTCATCTTCAACCTCCAAAATGA 1158 44.3 MKFLTLLSLLLSLLTKLKIKMGENSIVSKLKPYILVVSLQFGIAGIYVICMATLTKGMSRYVLIVYRNTVAALFLAPFALIFERKTRPKMTLPVALQIMVLGFLEPVVDQGFGYLGMMYTSASFASAIMNAVPSVTFIIAVIFRVEHLNIKQVRGVAKVIGTLVTFAGALVMTLYKGPILEFFWTQKTNHHVNSGAAAANQHWVAGTLFILLGCVSWSCFYILQSITVKRYPAELSLSALICLAGALQSTVIAVAIEHRPSAWAVGWDSRLLAPLYTGIVGSGIAYYFQAIVMKTRGPVFVTAFNPLCMIVVTIVSSIVLAEKIHLGSVIGAIIIALGLYSVVWGKNKDYSTAGNTQKPNAAVSELPITASQLPTEQDVHLQPPK 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17235107 17241906 + CePI673135_08g005810.1 Cec08g0581 209223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0581 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 66 175 - -
Cec08g0581 385 PANTHER WAT1-RELATED PROTEIN 34 355 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec08g0581 385 Pfam EamA-like transporter family 206 343 IPR000620 GO:0016020(InterPro)
Cec08g0581 385 Pfam EamA-like transporter family 42 161 IPR000620 GO:0016020(InterPro)
Cec08g0581 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 263 347 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0581 Cec-Chr8:17235107 Cec10g1660 Cec-Chr10:31079733 3.70E-92 dispersed
Cec11g1619 Cec-Chr11:30471817 Cec08g0581 Cec-Chr8:17235107 8.00E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0581 - - - 0.0