Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0648 ATGAAGGTAGGCATGGGACGTCCAATAGATAACCTTGTTCTACTCATGATGTTGTTGTTTTCAGCGGCGGCGTCACGGGACTGTGACCAACGACGGTGTGGGAACTTGGAAATTCCATTTCCATTTGGAACGAGGAAAGGGTGCTATCTGAGTGAGAATTTCTTGATCACCTGCAACAAAACTCATAATCCTCCAAGAGCATTTATAGGGGATGGCAACGTTATTGTAACCAATATATCAATCAACGACAGCGAGCTACGCATCTTGGGTTTGGTAGCCAAAGATTGCTACACACGAAATGGTTCCGAGACTGACAGTCATAACGAGGTCACACTGAATACGCCTTTATTCACCATTTCCAACACCAAGAACAAGTTCGTTGCCATTGGCTGCGATACTCAAGCCTTTATTTCTGGGAAAATCGAGGGGGATGCCTATAAAGGTGGTTGCATGGCGTTGTGTGAAAACAGTAATAAAACTCTAACAGATGGGCACTGCGCTGGGAATGGGTGCTGTGAGTTGGAGATTCCCAAAGGCCTAAAATATTTGGAGATCGTGGTCAGAAGCTTCCACCAGCACACTGAGGTATTCGACTTCAATCCATGTGGGTATGCTTTTGTGATCCAACAAAACAACTTCACTTTCTCCTCCAAATATATTCACACGTTTACACATGTAAGAGTTCCCCTGATGCTTGATTGGGGCATCCCAAACGGTACTTGCTCAAAATCAAATAAAAAAACCAACTGCAATAATATATGTGGACCAAATACCCAAAAGATTAACTACCTCAATGATGGATCTCAATATCGGTGCAAATGTTTGGATGGTTTCACGGGGAATCCATATCTCTCTGAAGGTTGTCAAGATGTAAATGAATGCAAGGATACAAGGTTGAATGATTGTGAACATAAACAGATGTGTGTTAACACACAAGGAAATTTTACCTGCTTTTGTCATAAGAACTATAAAGGAGATGGAAGAAACAAGGGAAAAGGATGCATTCCAACCTATAAGGCCTTCGATCAATACATCATCGGATGTACTGTAGGGTTAACACTTTTAGTAATTGGGTGCACATTGTTATGCTTGGGTTACGCAAAGTGGAAGGCCATCCACCAAAAGAAATATTTTTTCAAGAAAAATGGAGGTTTGGTGCTTGAACAACATCTTTCTGAGTGGGAATCACCGGTGGAGATGTTCAGAATTTTCACCCATGAAGAGTTGAAGAAGGCTACAAACAAGTTCCATGATAGCGCAGTGGTGGGAAAAGGTGGCTTTGGCACCGTTTACAAAGGCGTCTTAGATGATGGCTTGATAATTGCAATCAAGAAATCGAAATTAGTAGACCAATCCCAAACGGACCAATTCATTAATGAAGTCATTGTTCTGTCTCAAATCAACCATCGCAACGTGGTCAAGCTGCTGGGGTGCTGTTTGGAGACAAAAGTTCCTTTGTTGGTCTACGAGTTTGTAACCAATGGCACTCTCTTTGAACACATCCACAACAAAACAAACCATGCTCCTCTTTCCTGGGAAACTCGATTGAAGATAGCTTCAGAAATTGCTAGCGTCCTTGCATATTTGCATTCTTTCACTTCTACTCCCATCATCCACAGAGATATCAAGTCTTCTAATGTACTTTTAGACCATGATTACACAGCAAAGCTGTCTGATTTTGGAGCTTCAAAACTGGTACCGTTGGATCATACTCAGCTTTCCACGATGGTGCAAGGGACTCTTGGATATTTGGAGCCTGAGTACTTGTTGACAAGTGAGTTGACGGAGAAAAGTGACGTGTACAGCTTCGGAATTTTGCTTTTTGAGCTTATCACGGGAAAGAAGGCGGTGCGTTTTGATGTCCCAGAAGAAGAAAGAACTCTAGCCAAGATAGTTCTGTGTGCAATGAATGAAGATCGTTTGGAAGAAATTGTTGAGGAGGGATTGGCAACAGAAGCAAATATTGAGGAGATACAAGAGGTGGCAAAGCTAGCAAAAGAGTGTGTAAGAGTTAAAGGGGAGGAGCGCCCCACCATGAAGGAGGTGGGTATAAAGTTGGAGGAGCTGCGAATGTTACATGCTTGA 2085 42.54 MKVGMGRPIDNLVLLMMLLFSAAASRDCDQRRCGNLEIPFPFGTRKGCYLSENFLITCNKTHNPPRAFIGDGNVIVTNISINDSELRILGLVAKDCYTRNGSETDSHNEVTLNTPLFTISNTKNKFVAIGCDTQAFISGKIEGDAYKGGCMALCENSNKTLTDGHCAGNGCCELEIPKGLKYLEIVVRSFHQHTEVFDFNPCGYAFVIQQNNFTFSSKYIHTFTHVRVPLMLDWGIPNGTCSKSNKKTNCNNICGPNTQKINYLNDGSQYRCKCLDGFTGNPYLSEGCQDVNECKDTRLNDCEHKQMCVNTQGNFTCFCHKNYKGDGRNKGKGCIPTYKAFDQYIIGCTVGLTLLVIGCTLLCLGYAKWKAIHQKKYFFKKNGGLVLEQHLSEWESPVEMFRIFTHEELKKATNKFHDSAVVGKGGFGTVYKGVLDDGLIIAIKKSKLVDQSQTDQFINEVIVLSQINHRNVVKLLGCCLETKVPLLVYEFVTNGTLFEHIHNKTNHAPLSWETRLKIASEIASVLAYLHSFTSTPIIHRDIKSSNVLLDHDYTAKLSDFGASKLVPLDHTQLSTMVQGTLGYLEPEYLLTSELTEKSDVYSFGILLFELITGKKAVRFDVPEEERTLAKIVLCAMNEDRLEEIVEEGLATEANIEEIQEVAKLAKECVRVKGEERPTMKEVGIKLEELRMLHA 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18232063 18234905 + CePI673135_08g006480.1 Cec08g0648 209290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0648 694 ProSiteProfiles EGF-like domain profile. 290 329 IPR000742 -
Cec08g0648 694 Gene3D Plasmodium vivax P25 domain 206 343 - -
Cec08g0648 694 FunFam Fibrillin 2 285 330 - -
Cec08g0648 694 FunFam Wall-associated receptor kinase 2 386 491 - -
Cec08g0648 694 Pfam Wall-associated receptor kinase galacturonan-binding 28 88 IPR025287 GO:0030247(InterPro)
Cec08g0648 694 Pfam Protein kinase domain 417 682 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g0648 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g0648 694 SMART egf_5 293 335 IPR000742 -
Cec08g0648 694 SMART egf_5 240 289 IPR000742 -
Cec08g0648 694 SMART egfca_6 290 335 IPR001881 GO:0005509(InterPro)
Cec08g0648 694 ProSitePatterns Calcium-binding EGF-like domain signature. 290 317 IPR018097 GO:0005509(InterPro)
Cec08g0648 694 ProSiteProfiles Protein kinase domain profile. 416 694 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g0648 694 CDD STKc_IRAK 422 689 - -
Cec08g0648 694 SUPERFAMILY Protein kinase-like (PK-like) 392 687 IPR011009 -
Cec08g0648 694 FunFam Wall-associated receptor kinase 2 492 694 - -
Cec08g0648 694 Gene3D Transferase(Phosphotransferase) domain 1 492 693 - -
Cec08g0648 694 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524(InterPro)
Cec08g0648 694 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Cec08g0648 694 CDD EGF_CA 290 326 - -
Cec08g0648 694 SMART serkin_6 416 692 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g0648 694 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 690 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Cec08g0648 694 SUPERFAMILY EGF/Laminin 289 329 - -
Cec08g0648 694 Pfam Calcium-binding EGF domain 290 327 IPR049883 -
Cec08g0648 694 Gene3D Phosphorylase Kinase; domain 1 388 491 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0646 Cec-Chr8:18190066 Cec08g0648 Cec-Chr8:18232063 1.60E-251 dispersed
Cec08g0648 Cec-Chr8:18232063 Cec11g1957 Cec-Chr11:33629984 8.20E-175 dispersed
Cec08g0648 Cec-Chr8:18232063 Cec08g0650 Cec-Chr8:18257321 1.20E-130 proximal
Cec08g0647 Cec-Chr8:18209730 Cec08g0648 Cec-Chr8:18232063 5.30E-244 tandem
Cec08g0648 Cec-Chr8:18232063 Cec08g0649 Cec-Chr8:18250395 3.00E-124 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72185 PF00069 Pkinase 7.30E-50 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0648 - - - 0.0