Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0650 ATGCTCAAAATTTTCACCCAAGAAGAGTTGGAGAAGGCTACAAACAAGTACGACGAAAGCACAGTAGTTGGCAAAGGTGGCTACGGTACCGTTTACAAAGGAGTCTTAGATGACGGTTTGGCAGTTGCAATCAAGAAATCAAAATTAGTGAACCAATCCCAAACTGACCAGTTCATTAACGAAGTCATCGTTTTGTCCCAAATCAACCATCGCAACGTGGTCAAACTCATAGGGTGTTGTTTGGAGACAAAGGTTCCATTGTTGGTGTACGAGTTCGTAACCAACGGCACACTCTTTGAACACATCCACCGCAAAACCAACCATGCTTATCTCCCATGGGAAGCTCGCTTGAAAATAGCTTCGGAAATTGCCAGCGTCCTTTCATATTTGCATTCTTCCGCTTCTACTCCAATTATCCATAGAGATATCAAGTCCAATAATATACTTTTAGACCAAAACTACACAGCAAAAGTCTCTGATTTCGGAACGTCAAAGCTTGTTCCGTTGGATCGAACTCAAATATCCACAATGGTGCGAGGGACAATTGGGTATTTGGATCCGGAATATTTTTTGACGAGTGAGTTGACGGAGAAAAGCGATGTATATAGCTTTGGGATTGTACTTCTAGAGCTTGTAACGGGGAAGAAGGCAGTGTGTTTTGATGGGCCAGAAGAAGAGAGGAATCTAGCGATGTATGTGCTGTATGCAATGGAAGAAGATCGTGTGGAAGAAGTTGTGGAGAAGGGAATGGCGACAGAAGGAAACTTTGAGCAGATAAAAGAAGTGGCAAAACTGGCAAGAGAGTGTGTGAAAGTAAAAAGGGCGGAGCGGCCAACCATGAAGGAGGTAGCTATGGAGTTGGAGGGACTGAAACTGATGCAGGTTGAAAACTGTTCATGGGATAGAAGCAATTTGTTCGATGGAGCTTTAAACTCAAGCCAACATGTTTCCAATGATACGGACGAGAGCATGAAGGCTGAGGAGTTAACACTAGTCGAGGATGGAAGATGA 1011 43.62 MLKIFTQEELEKATNKYDESTVVGKGGYGTVYKGVLDDGLAVAIKKSKLVNQSQTDQFINEVIVLSQINHRNVVKLIGCCLETKVPLLVYEFVTNGTLFEHIHRKTNHAYLPWEARLKIASEIASVLSYLHSSASTPIIHRDIKSNNILLDQNYTAKVSDFGTSKLVPLDRTQISTMVRGTIGYLDPEYFLTSELTEKSDVYSFGIVLLELVTGKKAVCFDGPEEERNLAMYVLYAMEEDRVEEVVEKGMATEGNFEQIKEVAKLARECVKVKRAERPTMKEVAMELEGLKLMQVENCSWDRSNLFDGALNSSQHVSNDTDESMKAEELTLVEDGR 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18257321 18258331 + CePI673135_08g006500.1 Cec08g0650 209292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0650 336 ProSiteProfiles Protein kinase domain profile. 17 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g0650 336 CDD STKc_IRAK 23 290 - -
Cec08g0650 336 FunFam Wall-associated receptor kinase 2 93 306 - -
Cec08g0650 336 SUPERFAMILY Protein kinase-like (PK-like) 3 288 IPR011009 -
Cec08g0650 336 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524(InterPro)
Cec08g0650 336 MobiDBLite consensus disorder prediction 313 336 - -
Cec08g0650 336 Pfam Protein tyrosine and serine/threonine kinase 21 287 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g0650 336 PIRSF ILK 4 307 - -
Cec08g0650 336 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 302 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Cec08g0650 336 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Cec08g0650 336 SMART serkin_6 17 293 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g0650 336 Gene3D Transferase(Phosphotransferase) domain 1 93 306 - -
Cec08g0650 336 MobiDBLite consensus disorder prediction 320 336 - -
Cec08g0650 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g0650 336 FunFam Wall-associated receptor kinase 2 1 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0650 Cec-Chr8:18257321 Cec11g0896 Cec-Chr11:12041589 4.50E-110 dispersed
Cec08g0648 Cec-Chr8:18232063 Cec08g0650 Cec-Chr8:18257321 1.20E-130 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72186 PF07714 PK_Tyr_Ser-Thr 1.90E-50 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0650 - - - 0.0