Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0722 ATGGACATCGAACAGATGCCGGAGGCTCCACACCGTGGGTATCACCACCGCCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTTGACGATCTTCTCCTCTTCGACCCTCCCGACATCGATTTATCATCTGCTCTTCCTTCTCCCTCGCCGTCACCGTCTCCGACGCCGTCAGGGGCTCGTATGGCCGTCGATTCCTTCAATTCGAGGTCCCCTGAAGACGTCTCTGCCACAAAACCTAGGGCTGGAAACGGTAACTCCGCTTCCTTCTTCAGTTCTCACTACCGGAGCTTGTCGATGGATTCCGACTTCTTTGAGGGATTGGGGATGGCCGGAGATGGGAGTGACGGTGAAGTACTTGGCGGGAGAGTGACGGCGGGGGAGAAGAAGATGAGTCGTCATAGGCATAGCAATTCCATGGATGGGTCTTTGACCTCCTCGTTTGAAGCTGATTCCACCAAGAAAGCCATGGCACCTGATAAACTCGCTGAGCTTGCTTTGATGGACCCTAAAAGAGCTAAGAGGATTCTGGCAAATAGACAATCAGCTGCACGATCCAAGGAGAGGAAAATACGTTACACTAATGAACTAGAGAAGAAGGTGCAGATGCTTCAGTCAGAAGCCACTTCCCTTTCTGCTCAGGTCACAGTGTTACAGAGAGATACCACTGGATTGACTACTGAGAACAGAGAACTCAAGCTAAGGTTGCAAGCCATGGAGCAGCAAGCCCATCTGAGGGATGCTTTGAATGAGACACTGAAGGAGGAAGTGCAGCGGCTTAAGATAGTTGCGGCCCAACTGCCTGTTGCAAATGGCAACTCATTCAACATTGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATCATTGCTTCAATTTAGCAACTCCCAGAATCATCATCAACAGCCACAACTGCTTCACATGTCTCAGCCTGATGCTCAGGGAGGGTCTCCCCCATCCCAGCCTCCCGGAGTTTAA 990 51.62 MDIEQMPEAPHRGYHHRRSHSDTSFRFANFDDLLLFDPPDIDLSSALPSPSPSPSPTPSGARMAVDSFNSRSPEDVSATKPRAGNGNSASFFSSHYRSLSMDSDFFEGLGMAGDGSDGEVLGGRVTAGEKKMSRHRHSNSMDGSLTSSFEADSTKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTGLTTENRELKLRLQAMEQQAHLRDALNETLKEEVQRLKIVAAQLPVANGNSFNIGGGLPPQFPPLQTSSLLQFSNSQNHHQQPQLLHMSQPDAQGGSPPSQPPGV 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18933957 18935553 - CePI673135_08g007220.1 Cec08g0722 209364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0722 329 CDD bZIP_plant_RF2 173 222 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0722 329 MobiDBLite consensus disorder prediction 41 88 - -
Cec08g0722 329 Coils Coil 223 243 - -
Cec08g0722 329 MobiDBLite consensus disorder prediction 279 329 - -
Cec08g0722 329 Gene3D - 171 224 - -
Cec08g0722 329 Coils Coil 195 215 - -
Cec08g0722 329 Pfam bZIP transcription factor 172 228 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0722 329 SUPERFAMILY Leucine zipper domain 172 224 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0722 329 MobiDBLite consensus disorder prediction 286 319 - -
Cec08g0722 329 MobiDBLite consensus disorder prediction 128 153 - -
Cec08g0722 329 MobiDBLite consensus disorder prediction 1 20 - -
Cec08g0722 329 FunFam Transcription factor VIP1 171 224 - -
Cec08g0722 329 MobiDBLite consensus disorder prediction 139 153 - -
Cec08g0722 329 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 3 314 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec08g0722 329 SMART brlzneu 168 232 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0722 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 233 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0722 329 MobiDBLite consensus disorder prediction 58 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0482 Cec-Chr2:4492028 Cec08g0722 Cec-Chr8:18933957 3.30E-41 dispersed
Cec02g0484 Cec-Chr2:4505122 Cec08g0722 Cec-Chr8:18933957 3.40E-41 dispersed
Cec06g1220 Cec-Chr6:25086287 Cec08g0722 Cec-Chr8:18933957 3.60E-39 dispersed
Cec07g0571 Cec-Chr7:7129831 Cec08g0722 Cec-Chr8:18933957 1.10E-50 dispersed
Cec08g0722 Cec-Chr8:18933957 Cec09g0960 Cec-Chr9:9147623 2.40E-84 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30035 PF00170 bZIP_1 2.30E-07 CL0018 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0722 K20557 - csv:101215277 437.573