Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0722 | ATGGACATCGAACAGATGCCGGAGGCTCCACACCGTGGGTATCACCACCGCCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTTGACGATCTTCTCCTCTTCGACCCTCCCGACATCGATTTATCATCTGCTCTTCCTTCTCCCTCGCCGTCACCGTCTCCGACGCCGTCAGGGGCTCGTATGGCCGTCGATTCCTTCAATTCGAGGTCCCCTGAAGACGTCTCTGCCACAAAACCTAGGGCTGGAAACGGTAACTCCGCTTCCTTCTTCAGTTCTCACTACCGGAGCTTGTCGATGGATTCCGACTTCTTTGAGGGATTGGGGATGGCCGGAGATGGGAGTGACGGTGAAGTACTTGGCGGGAGAGTGACGGCGGGGGAGAAGAAGATGAGTCGTCATAGGCATAGCAATTCCATGGATGGGTCTTTGACCTCCTCGTTTGAAGCTGATTCCACCAAGAAAGCCATGGCACCTGATAAACTCGCTGAGCTTGCTTTGATGGACCCTAAAAGAGCTAAGAGGATTCTGGCAAATAGACAATCAGCTGCACGATCCAAGGAGAGGAAAATACGTTACACTAATGAACTAGAGAAGAAGGTGCAGATGCTTCAGTCAGAAGCCACTTCCCTTTCTGCTCAGGTCACAGTGTTACAGAGAGATACCACTGGATTGACTACTGAGAACAGAGAACTCAAGCTAAGGTTGCAAGCCATGGAGCAGCAAGCCCATCTGAGGGATGCTTTGAATGAGACACTGAAGGAGGAAGTGCAGCGGCTTAAGATAGTTGCGGCCCAACTGCCTGTTGCAAATGGCAACTCATTCAACATTGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATCATTGCTTCAATTTAGCAACTCCCAGAATCATCATCAACAGCCACAACTGCTTCACATGTCTCAGCCTGATGCTCAGGGAGGGTCTCCCCCATCCCAGCCTCCCGGAGTTTAA | 990 | 51.62 | MDIEQMPEAPHRGYHHRRSHSDTSFRFANFDDLLLFDPPDIDLSSALPSPSPSPSPTPSGARMAVDSFNSRSPEDVSATKPRAGNGNSASFFSSHYRSLSMDSDFFEGLGMAGDGSDGEVLGGRVTAGEKKMSRHRHSNSMDGSLTSSFEADSTKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTGLTTENRELKLRLQAMEQQAHLRDALNETLKEEVQRLKIVAAQLPVANGNSFNIGGGLPPQFPPLQTSSLLQFSNSQNHHQQPQLLHMSQPDAQGGSPPSQPPGV | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 18933957 | 18935553 | - | CePI673135_08g007220.1 | Cec08g0722 | 209364 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0722 | 329 | CDD | bZIP_plant_RF2 | 173 | 222 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0722 | 329 | MobiDBLite | consensus disorder prediction | 41 | 88 | - | - | |
Cec08g0722 | 329 | Coils | Coil | 223 | 243 | - | - | |
Cec08g0722 | 329 | MobiDBLite | consensus disorder prediction | 279 | 329 | - | - | |
Cec08g0722 | 329 | Gene3D | - | 171 | 224 | - | - | |
Cec08g0722 | 329 | Coils | Coil | 195 | 215 | - | - | |
Cec08g0722 | 329 | Pfam | bZIP transcription factor | 172 | 228 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0722 | 329 | SUPERFAMILY | Leucine zipper domain | 172 | 224 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0722 | 329 | MobiDBLite | consensus disorder prediction | 286 | 319 | - | - | |
Cec08g0722 | 329 | MobiDBLite | consensus disorder prediction | 128 | 153 | - | - | |
Cec08g0722 | 329 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cec08g0722 | 329 | FunFam | Transcription factor VIP1 | 171 | 224 | - | - | |
Cec08g0722 | 329 | MobiDBLite | consensus disorder prediction | 139 | 153 | - | - | |
Cec08g0722 | 329 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 3 | 314 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cec08g0722 | 329 | SMART | brlzneu | 168 | 232 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0722 | 329 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 170 | 233 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0722 | 329 | MobiDBLite | consensus disorder prediction | 58 | 88 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0482 | Cec-Chr2:4492028 | Cec08g0722 | Cec-Chr8:18933957 | 3.30E-41 | dispersed | |
Cec02g0484 | Cec-Chr2:4505122 | Cec08g0722 | Cec-Chr8:18933957 | 3.40E-41 | dispersed | |
Cec06g1220 | Cec-Chr6:25086287 | Cec08g0722 | Cec-Chr8:18933957 | 3.60E-39 | dispersed | |
Cec07g0571 | Cec-Chr7:7129831 | Cec08g0722 | Cec-Chr8:18933957 | 1.10E-50 | dispersed | |
Cec08g0722 | Cec-Chr8:18933957 | Cec09g0960 | Cec-Chr9:9147623 | 2.40E-84 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30035 | PF00170 | bZIP_1 | 2.30E-07 | CL0018 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0722 | K20557 | - | csv:101215277 | 437.573 |