Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0780 | ATGGCGAAGAATGCGGCGGAGCGCGGGTCGTTCTCGGGGAAGGACTACCACGATCCGCCACCGGTGCCGCTCATCGACGGCGAGGAGATAAGGAAGTGGTCGTTCTACAGAGCTTTGATTGCGGAGTTCATAGCGACTTTGCTTTTTCTGTATGTGACTGTGTTGACGGTGATCGGGTACAAATCGGAAACGGATGGAATCGGGAAGAAGAATGTGGATTCTTGTGGAGGAGTTGGGATTCTGGGAATTGCTTGGGCATTTGGAGGAATGATCTTCGTTCTTGTTTACTGTACTGCTGGAATTTCAGGGGGCCACATAAACCCAGCGGTGACATTTGGGCTGCTGTTGGGCCGAAAGGTGTCACTTGTGCGGGCCGTGATGTACATGGTGGCCCAATGTTTGGGGGCCATCAGCGGAGTTGGGCTTGTTAAGGCCTTCCAGAAGGCCCACTTCCAGAAGTACGGCGGCGGAGCCAATGGGCTTGCTGATGACTATACCATCGGCGTCGGACTGGCCGCCGAGATCGTCGGCACTTTCGCATTGGTGTATACCGTCTTCTCCGCCACCGATCCTAAACGAAATGCCAGAGATTCCCATGTTCCGGTTTTGGCTCCACTTCCAATTGGGTTTGCAGTTTTCATGGTTCATTTGGCTACCATTCCAATCACTGGCACTGGAATCAACCCAGCAAGAAGCTTGGGATCTGCTGTTATCTTCAATGAACAAAAGACTTGGAATAACCATTGGATATTTTGGGTTGGACCCTTCATAGGAGCAGCCATTGCAGCATTCTACCACCAATTCATCTTGAGAGCAGGTGCTGTTAAAGCTCTTGGTTCATTTAGAAGCAACCCACATGTGTGA | 864 | 51.27 | MAKNAAERGSFSGKDYHDPPPVPLIDGEEIRKWSFYRALIAEFIATLLFLYVTVLTVIGYKSETDGIGKKNVDSCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLGRKVSLVRAVMYMVAQCLGAISGVGLVKAFQKAHFQKYGGGANGLADDYTIGVGLAAEIVGTFALVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGSAVIFNEQKTWNNHWIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPHV | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 19589521 | 19592715 | - | CePI673135_08g007800.1 | Cec08g0780 | 209422 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0780 | 287 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | PRINTS | Major intrinsic protein family signature | 37 | 56 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | Pfam | Major intrinsic protein | 29 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 8 | 283 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Cec08g0780 | 287 | NCBIfam | MIP family channel protein | 41 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | FunFam | Probable aquaporin PIP1-2 | 22 | 285 | - | - | |
Cec08g0780 | 287 | SUPERFAMILY | Aquaporin-like | 29 | 271 | IPR023271 | - | |
Cec08g0780 | 287 | Gene3D | Glycerol uptake facilitator protein. | 22 | 287 | IPR023271 | - | |
Cec08g0780 | 287 | CDD | MIP | 37 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g0780 | 287 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec07g0458 | Cec-Chr7:4766688 | Cec08g0780 | Cec-Chr8:19589521 | 1.60E-28 | dispersed | |
Cec07g0459 | Cec-Chr7:4774806 | Cec08g0780 | Cec-Chr8:19589521 | 3.80E-105 | dispersed | |
Cec08g0780 | Cec-Chr8:19589521 | Cec09g0187 | Cec-Chr9:1663622 | 9.90E-34 | dispersed | |
Cec10g2040 | Cec-Chr10:35154497 | Cec08g0780 | Cec-Chr8:19589521 | 4.30E-117 | wgd | |
Cec04g1036 | Cec-Chr4:29927490 | Cec08g0780 | Cec-Chr8:19589521 | 6.60E-79 | wgd | |
Cec05g2318 | Cec-Chr5:34482005 | Cec08g0780 | Cec-Chr8:19589521 | 3.00E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0780 | K09872 | - | csv:101205700 | 516.538 |