Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0790 ATGGAATTCCATCCTGAAAATGGAAACCATGGATCGGTGAAGGAGACCTCTTTGTGTTGCAACGTGGCGGCGTATTGGAGTGGTGCAGCGAAGGGGCTCGAGCGGAGTCATGTGGAGGAGTTTAAGCGTATGGTCATGGAATTTCGTCGCCCTATTGTGCGACTTGGAGGCGAGAGCCTCACGATAGCGCAAGTTGCTGCCATTGCTACCCGTGCCTTTGATGTTGCAGTGGAGCTCTCTGAGGAGGCTCGCCCTGTTGTGGAGGCGAGTAGTAGGTGGATTGTTAAAAGTATGACTAATGGAACCGATAGTTATGGTGTTACGACTGGTTTTGGTTCTACGTCGCATCGGAGGACTAACCACGGAGAAGCCCTTCAAAAAGAGCTCATTAGATTCTTAAACGCTGGAATTTTTGGAAACGATCCAAATTCTTGCCATACATTGCCACAACAAGCAACCAGAGCTGCCATGGTGGTGAGAATAAACACACTTTTGCAAGGCTACTCTGGCATTAGGTTTGAAATTTTGGAAGCCATAACCAAATTACTCAACCACAACATAACTCCATGTCTCCCTCTTAGAGGTACCATTACAGCTTCCGGTGACCTGGTTCCTCTCTCATATATTGCTGGGCTTTTGACTGGTAGACCTAATTCTAAGGCCATTGGGCCTAACGGTGACTCTCTTAACCCAATTGAGGCATTTCATCTTGCTGGGATTAGTGGTGGTTTCTTCAACTTGCAGCCGAAAGAAGGTCTTGCTCTTGTCAATGGCACTGCAGTTGGGTCAGGCTTGGCTTCCATGGTTCTATTTGAAGCTAATTTTCTTGCTATCCTTTCTGAGATCTTGTCAGCAATTTTTGCTGAAGTTATGCAAGGAAAACCTGAGTTTACAGATCATTTGACTCATAAGTTAAAACACCATCCTGGTCAGATTGAAGCAGCTGCAATTATGGAGCATATATTAGATGGAAGTTCTTATGTCAAAAGTGCTAAAAAATTGCACGAAACTGACTCGCTTCAAAAGCCTAAACAAGATCGATATGCTCTTAGAACTTCACCTCAGTGGCTCGGTCCTCAAATTGAAGTCATTAGATACTCCACCAAAATGATTGAACGTGAGATTAACTCAGTGAACGATAACCCATTGATTGATGTGTCGAGAAACAAGGCTTTGCATGGAGGAAATTTCCAAGGCACTCCCATTGGCGTGTCCATGGATAATACTCGTTTAGCCATTGCTTCTATTGGTAAACTCATGTTTGCACAATTCTCAGAACTTGTTAATGACTTCTACAATAATGGGTTGCCTTCAAATCTCTCTGCTAGTAGAAATCCAAGTTTGGATTACGGGTTCAAAGGTGCTGAGATTGCAATGGCTTCATATTGCTCTGAGCTTCAATACTTGGCAAATCCAGTAACCAGCCATGTTCAAAGCGCCGAACAACATAACCAAGACGTAAACTCATTGGGGTTGATATCATCGAGAAAGACAGCGGAAGCTGTTGAGATTTTAAAGCTTATGTCCACTACTTATTTGGTGGCATTGTGCCAAGCTATTGATTTAAGACACATGGAGGAGATTTTGAAGAAAACAGTAAAGAACACCGTTAGTCAAGTGGCAAAAAAGATTCTGGTGTTGCACTTTAATGGCAATCTCCATCCAATTAGGCATAGTGAAAAGGATTTGCTTCAAGTTGTAGACAGAGAACACGTTTTTACCTATATTGATGATCCTTGCAGTGCTTCATATCCATTGATGCAAAAGCTAAGACAAGTGTTGGTGGATCATGCCCTAAAAAATGGTGAAAAAGAAAACAACCCAAGTGCTTCAATCTTCCAAAAGATCACAGCTTTTGAAGATGAATTAAAAGCACTTTTGCCTAAAGAAGTGGAAAATGCAAGAATGGAAGTGGAAAAAGGGAGCCCCACCATTGAAAACCAAATTAAAGAATGCAGATCTTATCCACTATACAAGTTCGTTAGAGAAACGTTGGGAACTCAATTGTTGACTGGCGAGAAAGATGTTTCGCCAGGAGAAGAATTCGATAAGGTTTTTTCAGCTATTTCTGATGGAAAATTGATAGATCCAATGCTTGAATGTTTGAAGGATTGGAATGGTGCTCCGCTTCCTCTTAGTTAG 2142 42.3 MEFHPENGNHGSVKETSLCCNVAAYWSGAAKGLERSHVEEFKRMVMEFRRPIVRLGGESLTIAQVAAIATRAFDVAVELSEEARPVVEASSRWIVKSMTNGTDSYGVTTGFGSTSHRRTNHGEALQKELIRFLNAGIFGNDPNSCHTLPQQATRAAMVVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGDSLNPIEAFHLAGISGGFFNLQPKEGLALVNGTAVGSGLASMVLFEANFLAILSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKSAKKLHETDSLQKPKQDRYALRTSPQWLGPQIEVIRYSTKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSTTYLVALCQAIDLRHMEEILKKTVKNTVSQVAKKILVLHFNGNLHPIRHSEKDLLQVVDREHVFTYIDDPCSASYPLMQKLRQVLVDHALKNGEKENNPSASIFQKITAFEDELKALLPKEVENARMEVEKGSPTIENQIKECRSYPLYKFVRETLGTQLLTGEKDVSPGEEFDKVFSAISDGKLIDPMLECLKDWNGAPLPLS 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19735758 19739912 + CePI673135_08g007900.1 Cec08g0790 209432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0790 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Cec08g0790 713 CDD PAL-HAL 58 523 IPR001106 -
Cec08g0790 713 FunFam Phenylalanine ammonia-lyase 526 647 - -
Cec08g0790 713 FunFam Phenylalanine ammonia-lyase 260 542 - -
Cec08g0790 713 NCBIfam phenylalanine ammonia-lyase 25 703 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Cec08g0790 713 SUPERFAMILY L-aspartase-like 25 712 IPR008948 GO:0003824(InterPro)
Cec08g0790 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841(InterPro)
Cec08g0790 713 Gene3D - 526 647 IPR023144 -
Cec08g0790 713 FunFam Phenylalanine ammonia-lyase 13 259 - -
Cec08g0790 713 PANTHER HISTIDINE AMMONIA-LYASE 21 712 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Cec08g0790 713 Gene3D - 16 259 IPR024083 -
Cec08g0790 713 Pfam Aromatic amino acid lyase 60 538 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1306 Cec-Chr7:28588741 Cec08g0790 Cec-Chr8:19735758 0.00E+00 dispersed
Cec07g1307 Cec-Chr7:28593523 Cec08g0790 Cec-Chr8:19735758 0.00E+00 dispersed
Cec04g1051 Cec-Chr4:30082408 Cec08g0790 Cec-Chr8:19735758 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0790 K10775 - csv:101206890 1296.95