Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0815 | ATGTTTGCTACTACTGGCATTCTCTTCTTCATCTGGTTTTTGAGCTCCACTCTGCCTTCTCTTACCATGCCAACTTTCAACTTCAATCTCACTCTCCCACATCTTCTTCCAGATCCTGAGACTGTTGCTTATCAAGTTCAGAGGAGTGTGAACGATTCCATTTCCAGAAGGCAAATGCTGTCCATTCATTCAAAAGGACAATCCAATTCCTGTCAAACCGGAAACCCTATCGACGATTGTTGGCGCTGCGACTCCAACTGGCAAGCCAATCGCCAAAAACTCGCCGATTGTGGCATTGGATTCGGCCGAGACGCCATGGGAGGGAAAGGAGGTCAGATCTACGTAGTTACAGATTCCTCCGATTCCGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCCGTAGTTCAAGATGAACCTCTCTGGATTGTCTTTGCTGCAGATATGACAATCAAACTCAAATACGAACTCATGATGAACAGTTACAAAACCCTAGATGGACGCGGTGCCAATGTCCATATCACCGGCGGCGGCTGCGTCACACTCCAATACATCTCGAATATAATCATCCACAATATCAACATCCACCACTGTATTCCTACCGGCCACACCAACATCCGCTCGTCTCCAACGCACGTCGGATACAGAGGAAAATCCGACGGCGACGGAATCTCGATCTTTAGCTCGCGCAACATCTGGATCGATCATTGCTCGCTCTCGTACTGTACCGATGGCCTAATCGACGCCATTATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGGCACGACGACGGCTTCACGCCGGACTCGGGGATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTTGTTCAGAGGATGCCCCGGTGCCGACGGGGATACATTCATGTTGTTAACAACGACTTCCGATCGTGGGAGATGTACGCCATCGGCGGCAGCGGTAATCCGACGATCAACAGCCAAGGAAATCGGTACATTGCTCCGGGAAATCCCAATGCGAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGATTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATAATGGTAAATGGAGCCTTTTTTGTGCCATCCGGCGAAGGACTGAGCAATATGTACGTTAAAGCTTCCAGTTTGCCGCCCAAATCCGCCGCTCTTGTCGACCAGCTCACTCTTAACGCCGGCGTCTTCGGCGGCTCCAGGGAGAGTAGACAGAGCAACACATATCCCGGAGACGAAAGCTCCTCCAGCTCGGGATCCAGTGGCAGCAGCGATGGTGGTGGTGACTACTTTGGGATGATATTCGGTGGGGGCGGGATTAACAGTGCACCACTGCCATCTCTTTCAGTTGTTAACATGATCATTCTAACTCTGTTTACGGTTTTAGTTCTGTACACAAACTCGAACTACAATGCTTTATTATCAACATTGTCATTGTAG | 1494 | 51.0 | MFATTGILFFIWFLSSTLPSLTMPTFNFNLTLPHLLPDPETVAYQVQRSVNDSISRRQMLSIHSKGQSNSCQTGNPIDDCWRCDSNWQANRQKLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNIIIHNINIHHCIPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRESRQSNTYPGDESSSSSGSSGSSDGGGDYFGMIFGGGGINSAPLPSLSVVNMIILTLFTVLVLYTNSNYNALLSTLSL | 497 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 19998474 | 20004351 | - | CePI673135_08g008150.1 | Cec08g0815 | 209457 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0815 | 497 | Pfam | Pectate lyase | 157 | 338 | IPR002022 | - | |
Cec08g0815 | 497 | Gene3D | - | 74 | 416 | IPR012334 | - | |
Cec08g0815 | 497 | PANTHER | PECTATE LYASE 18-RELATED | 37 | 416 | IPR045032 | GO:0030570(InterPro) | |
Cec08g0815 | 497 | PRINTS | Pollen allergen Amb family signature | 157 | 173 | IPR018082 | - | |
Cec08g0815 | 497 | PRINTS | Pollen allergen Amb family signature | 323 | 342 | IPR018082 | - | |
Cec08g0815 | 497 | PRINTS | Pollen allergen Amb family signature | 394 | 417 | IPR018082 | - | |
Cec08g0815 | 497 | PRINTS | Pollen allergen Amb family signature | 301 | 320 | IPR018082 | - | |
Cec08g0815 | 497 | PRINTS | Pollen allergen Amb family signature | 97 | 114 | IPR018082 | - | |
Cec08g0815 | 497 | PRINTS | Pollen allergen Amb family signature | 121 | 146 | IPR018082 | - | |
Cec08g0815 | 497 | PRINTS | Pollen allergen Amb family signature | 221 | 242 | IPR018082 | - | |
Cec08g0815 | 497 | PRINTS | Pollen allergen Amb family signature | 365 | 389 | IPR018082 | - | |
Cec08g0815 | 497 | SMART | amb_all | 149 | 346 | IPR002022 | - | |
Cec08g0815 | 497 | MobiDBLite | consensus disorder prediction | 416 | 442 | - | - | |
Cec08g0815 | 497 | SUPERFAMILY | Pectin lyase-like | 75 | 414 | IPR011050 | - | |
Cec08g0815 | 497 | FunFam | Pectate lyase | 74 | 416 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0993 | Cec-Chr4:29581621 | Cec08g0815 | Cec-Chr8:19998474 | 1.90E-40 | dispersed | |
Cec08g0815 | Cec-Chr8:19998474 | Cec08g1811 | Cec-Chr8:29105402 | 1.50E-141 | dispersed | |
Cec04g1082 | Cec-Chr4:30350018 | Cec08g0815 | Cec-Chr8:19998474 | 9.90E-180 | wgd | |
Cec05g2352 | Cec-Chr5:34761519 | Cec08g0815 | Cec-Chr8:19998474 | 1.70E-194 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0815 | K01728 | - | csv:101207535 | 920.613 |