Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0841 ATGTCCTTAATGCTCTTGTTTGAAAGAGTTTATATGGGCATTGTCATTCTCTTTGTCAAACTCTTTAGAAAAAACCCTCACAAAACTTACAAGTGGGAGCCCATTAAAGATGATCTTGAACTTTCCCATTTTGCTTATCCCATGGTTTTGGTTCAAATTCCAATGTACAATGAAAAAGAGGTTTATCAATTGTCAATTGGAGCAGCATGTGGACTTTCATGGCCAACTGATAGGATCATAATTCAAGTTCTTGACGATTCTACTGATCCTTCTATCAAGGATCTGGTGGAATTAGAGTGCAAAAGATGGGCAAGCAAAGGGATAAACATAAAGTACGAGATCAGAGACAACAGAAATGGGTACAAAGCTGGGGCTTTAAAAGAAGGAATGAAGCATAATTACGTTAAACTTTGCGATTACGTCGCTATTTTCGATGCCGATTTCCAACCAGAGCCTGATTTTCTTTGGCGTACCATTCCATTTCTCACAAACAACCCTGAGATTGCTCTTGTTCAAGCTCGCTGGAAGTTCGTGAACTCAGATGAATGTTTAATGACAAGAATGCAAGAGATGTCATTGGATTATCATTTCAAAGTGGAGCAAGAAGTTGGATCTGCAACTTATGCCTTCTTTGGGTTCAATGGCACAGCAGGTGTTTGGAGAATTGCTGCACTGAATGAGGCTGGAGGATGGAAGGATCGGACCACTGTTGAAGATATGGATTTGGCTGTTCGAGCTAGCCTCAAAGGCTGGAAGTTTGTCTATGTAGGCGATCTCAAGGTGAAGAATGAATTGCCTAGTACCTTCAAAGCTTATCGGTATCAGCAACACCGGTGGTCTTGTGGCCCGGCGAACCTCTTCAGAAAGATGGTTGTTGAAATCATGAGGAACAAGAAAGTCTCCCTGTGGAAGAAGCTTTACCTGATCTACAGCTTCTTCTTCGTGCGGAAGATCGTTGCCCATATTGTCACGTTTGTCTTTTATTGTGTTGTTTTGCCAGCTACAGTCTTGGTTCCCGAAGTATCAGTACCAAAATGGGGTGCTGTATATATTCCTTCTACGATCACCCTCCTAAACGCAGTTGGAACTCCAAGATCATTCCACCTGATCATTTTCTGGATCCTCTTCGAGAACGTCATGTCGCTTCACCGAACAAAGGCAACATTCATCGGTCTGTTGGAAGCAGGGAGAGTAAATGAATGGGTCGTCACTGAGAAATTGGGAGATGCGCTAAAGACTAAACTGGGTTGCAAAGCTCCCCGGAAACCTCGTTCTAGAATCGGAGAAAGACTCCATATGCTTGAGCTTTGTGTTGGAGCCTACCTCTTCTTCTGTGGCTGGTACGATCTCAACTTCGGGAAGAACCGATACTTCATCTACCTCTTCCTTCAATCATTTGCCTTCTTCATCGCTGGAGTCGGTTACGTCGGAACTCTGGTTCCCAACTCTTAG 1452 43.32 MSLMLLFERVYMGIVILFVKLFRKNPHKTYKWEPIKDDLELSHFAYPMVLVQIPMYNEKEVYQLSIGAACGLSWPTDRIIIQVLDDSTDPSIKDLVELECKRWASKGINIKYEIRDNRNGYKAGALKEGMKHNYVKLCDYVAIFDADFQPEPDFLWRTIPFLTNNPEIALVQARWKFVNSDECLMTRMQEMSLDYHFKVEQEVGSATYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYVGDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVVEIMRNKKVSLWKKLYLIYSFFFVRKIVAHIVTFVFYCVVLPATVLVPEVSVPKWGAVYIPSTITLLNAVGTPRSFHLIIFWILFENVMSLHRTKATFIGLLEAGRVNEWVVTEKLGDALKTKLGCKAPRKPRSRIGERLHMLELCVGAYLFFCGWYDLNFGKNRYFIYLFLQSFAFFIAGVGYVGTLVPNS 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20217657 20222004 + CePI673135_08g008410.1 Cec08g0841 209483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0841 483 Pfam Glycosyl transferase family group 2 140 334 IPR001173 -
Cec08g0841 483 FunFam Glucomannan 4-beta-mannosyltransferase 9 38 266 - -
Cec08g0841 483 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 39 263 IPR029044 -
Cec08g0841 483 CDD CESA_CaSu_A2 47 283 - -
Cec08g0841 483 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 1 479 - GO:0005794(PANTHER)|GO:0016757(PANTHER)|GO:0051753(PANTHER)
Cec08g0841 483 SUPERFAMILY Nucleotide-diphospho-sugar transferases 45 325 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0841 Cec-Chr8:20217657 Cec10g1960 Cec-Chr10:34395370 8.70E-224 dispersed
Cec08g0841 Cec-Chr8:20217657 Cec04g1124 Cec-Chr4:30809896 1.90E-234 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0841 K13680 - csv:101211547 972.23