Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0879 ATGGCGTCAGAGCGGCCGCTACTGATTATATCTCCAAAAACACCCAAGGCTGTCTCTCACGATCTACAGAAACAGGAGTTGAACCAACCTGGATTGTTCTTCGCCATGGATTCTCGAAGCCCTAATGAGAATTCACCAAGTATGGAAATGAGTTATCGCTCATTCTCGCGGCGAAGTCAATCATCGCTGCAATCGAAGTCCTCAATTCGTGAAGTGGGTTCTAGTGATTTTGGATCGAGGCCTGTTCGTCATGGTTCTCGAGGTGCTGATTCTGAAGCATTGAGCATATCCCAGAAGGAGATCAGTGATGAAGATGCGAGGTTAATTTACATTGATGATCCCGAAAAGACAAACGAGAAGTTTGAATTCGCTAGAAATTCGATTCGCACCGGCAAGTATTCGATTCTTACTTTTCTGCCCAGGAATCTATTTGAACAATTTCATAGAATTGCTTATATATATTTCCTTGTTATTGCGGTTCTCAATCAACTTCCCCAGCTTGCTGTTTTTGGTCGGGGAGTTTCCATTTTGCCTTTAGCTTTTGTGCTGCTAGTTACTGCATTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAAATTGAGAACAATAGATTAGCTTCAGTTTTGGTAGATGGTCAGTTTCAACCCAAGAAATGGAAGAATATTAGAGTTGGTGAGATAATTAAGATTGGTGCAAATGACACCATTCCTTGTGATATGGTGCTTCTTTCTACCAGTGATTCCACAGGGGTTGCATATGTGCAAACTCTGAATTTGGATGGGGAATCAAATTTGAAAACCCGGTATGCAAAACAGGAGACGATGTCTAAAATGCCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAAACCCAATAGGAATATTTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGTCTTTCTCTTGGACCTCCGAACATAGTTCTTCGTGGCTGTGAGCTCAAGAATACCAGTTGGGCTGTTGGTGTTGCTGTTTATGCTGGCCGTGAGACGAAAGCCATGCTTAACAGTTCTGGAGCTCCATCAAAAAGAAGTCGACTCGAGACTCGCATGAACGTGGAGATTGTTATGCTCTCTCTCTTTCTTGTTGCTTTGTGTACCGTTGTTTGTGTTTTGGCTGCTATTTGGTTCATCAGAAACAGGGAAGATTTGGACATTTTACCTTATTTCAGAAATAAGGACTTCTCAGAGGACCCACCTGAAACCTATAATTACTATGGATGGGGATTGGAGGCGTTTTTTGTGTTCCTCATGTCGGTTATTGTGTTCCAGATCATGATCCCCATTTCACTCTACATTTCAATGGAGGTTGTTCGTATTGGCCAGGCTTATTTCATGATCCGAGACACCCAAATGTATGACGAAACATCAAATTCAAGATTTCAGTGTCGGGCTTTGAACATAAATGAGGATTTAGGACAAATAAAGTATGTGTTTTCGGACAAAACAGGTACCCTTACCGAGAATAAGATGGAATTTCGATGTGCAAGCATATGGGGGGTCGATTATGGAGGTGAAAGTACCAATCCCCTCGACGAGCAGATTGGATACTCTGTTCGAGTGAATGGAAAGGTTTTGAGACCGAAATTGGGTGTCAAAACTGATCCTGAGCTTCTACAATTATCGAGAAGTGGAAAACACACCAAGGATGGAAGATACATTCATGATTTCTTCCTCGCTTTAGCTGCTTGCAATACCATCGTTCCTCTCATTACCGAAACTTCTGATCCTTCAGTGCAATTAATTGACTACCAAGGGGAGTCTCCAGATGAACAGGCATTGGTTTATGCTGCAGCAGCATATGGTTTTATGCTAATTGAACGAACTTCTGGCCATATAGTTATTGACATACATGGTGAAAAACAAAGGTATAATGTTTTGGGAATGCACGAGTTTGATAGTGACAGGAAGAGGATGTCGGTGATACTGGGGTGTCCTGATATGACCTTTAAAGTATTTGTAAAAGGTGCTGATAACTCCATGCTCAAGGTGATGGGTGAAAATCTGAACATGGATATCATTCAATCGACTAAAGCTCATCTTTATTCATACTCATCAAAGGGTCTCAGAACACTGGTTATTGGGATGAAAGAACTCAGTTCCTCCAACTTTGATAAATGGCACATGATGTTTGAGGAAGCAAGTACCGCTTTGATTGGTAGGGCTGCTAAGCTTCGCAAGGTTGCCAGCTGTATTGAAAACAATTTGTTCATATTAGGTGCCTCAGGCATTGAGGATAAGTTACAAAAAGGTGTGCCAGAAGCCATAGAAGCTTTAAGAACCGCGGGAATTAAAGTATGGGTTTTGACTGGAGACAAGCAAGAAACTGCCATATCAATAGGTTACTCCTCAAAGCTCTTGACAAACAAGATGACCCAAATTATAATTAACAGCAACTCGGCAGAATCATGCAAAAGGAAATTAGAAGATGCAATAATCATGACGAAGAAGCTTGCTACTGCCTCAGGCGTTGCACTGGATAATGAAAGAAGCACTGAAGTTGTAACAACTTCGGTTGCGTTGATCATTGATGGCAGCAGCCTCGTTCATATTCTTGACAGTGAACTGGAAGAACAGCTTTTCCAACTATCTTGTAACTGTTCGGTGGTGTTATGTTGTCGAGTCGCTCCATTGCAAAAGGCTGGCATTGTTGCTCTTGTGAAGCGAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCGAATGACGTGTCAATGATCCAAAAGGCAGATGTGGGTGTTGGTATCAGTGGTTTAGAGGGTCGACAAGCTGTTATGGCATCAGATTTTGCCATGGGACAATTTAGATTTTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGGATGGGCTACATGATCTTGTACAACTTTTACAGAAATGCAGTATTTGTTCTTGTTCTATTCTGGTATGTGCTCTTTACCGGTTACTCGTTGACGACGGCGATCAACCAATGGAGTAGTGTGCTTTACTCAATAATCTATACTTGTTTGCCCACTATTGTTGTTGGAATTCTTGACAAGGACTTGGGAAGAAGGACTCTTCTTAGTTACCCTCAACTCTATGGGGCTGGCCATAGACAGGAAAGCTACAATTCTAAATTGTTTTGGTTAACAATGATTGACACTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCCTTGCATTTTGGGCTACCACTGTCGACATTTCAGGCCTCGGAGATCTGTGGCTACTCGCCACAGTCATTGTTGTCAACTTACATTTATCAATGGACGTGGTTCGATGGTATACTGTCACTCATGCTGTGATCTGGGGATCCACTGTCGCAACTGTCATTTGTGTCATTGTTCTTGATTCGATATTGTCGCTTCCTGGTTACTGGGCAATATATCATGTGGCGGGCACAGCATCTTTTTGGCTATGTTTGTTATCTATCGTCGTAGTAGCATTACTTCCTCGTTTCGTCGTAAAATACCTTTATCAGTCTTACTGTCCATGTGACATCCAAATAGCAAGAGAGGCTGATAAGTTTGGATGGACAAGAGAGCTGGGAGTTGTACAAACAGAGATGAGCCCAGTCCTCAACAATCCTTCACAAGAAAATCACAATTCTTTAGGCTGCTTCAGAATAATTCTCCTGTTGCCCGTTGCCATCCAAAGGATAGGAAATATCAATTCTTCATCACCTCTAAGAAAATCAATGGCGAACGGACTAATGAAACTGACCCGCTTCGCCTCTCGCTCTTCTCTCCTTCCCCGTCATTGGCACCAGCCCTCTTCATTTTCTCGTCTTGGTGCTCAGGAATTTCTCCAGACAGCTGAGGTGATGAGCGGAAGTGAGACGAATGTTTCTAAAAGAGTTGCTGTAACTACCCTTGACGAGGCGAAGAGGGCCTTACCAGATACTTATGCTACTGTAAGAGAGCTGCTTACTCCACTGAAGTCTGGCATTGCCAAACGATCTGCTGTGTATGTGTGCGATATTCCTAAGGATGCACTTGGAGCTAATGGTAAGGCTGTTTTATCTAGATGGCAGGATGCAAGGGCATCTGTTGTCAAATTTTCAACATTAGGTGTCACCAGTAGATGTGATATGAGTGCCAGAGGGCCGTGCTTTGCGAGGTTTATGTCATCAAAATCTTCAGAGAAACATGGACAAACTGCATCTGAGAGCAAAAAAGAAATATCAACAGTGGAGGATCCATTTGATGCTCCTACATATAATATACCAGAGAAGCCTGTTACATTTGCAGAGGGAGCTTCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCTGCTGCTGGATACGCAGTTTTTAAGGAGCTTATATTTCAACCAAAAGAGTACAAGATCTTTGACAAGGCTCTTAAAAGGATTCAAGATGACAGCCAGGTTAGGGTAAGGATTGGTTCCCCTATAACCGGTTATGGGCAAGAAACTAGAAATCGAGCTGCTCGCCAACGTATCCCTAATAGGGTATGGACTGACGAAGATGGTGTAGAGCGAGTAGAGGTGAATTTTTATATCCGTGGGCCCCATGGAGCTGGGAAAGTTTATACTGAGATGTTCAAGGATCAAGTGGACAAGCAGTGGAAGTTCACATACTTGATCGTCGAGGTGAAATCGCCTTCTCCGGCCCAATTGATCCTAGAATCTTATATGCCTGCCTGA 4719 42.81 MASERPLLIISPKTPKAVSHDLQKQELNQPGLFFAMDSRSPNENSPSMEMSYRSFSRRSQSSLQSKSSIREVGSSDFGSRPVRHGSRGADSEALSISQKEISDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLLVTAFKDAYEDWRRHRSDKIENNRLASVLVDGQFQPKKWKNIRVGEIIKIGANDTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNVEIVMLSLFLVALCTVVCVLAAIWFIRNREDLDILPYFRNKDFSEDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMEVVRIGQAYFMIRDTQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESTNPLDEQIGYSVRVNGKVLRPKLGVKTDPELLQLSRSGKHTKDGRYIHDFFLALAACNTIVPLITETSDPSVQLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGEKQRYNVLGMHEFDSDRKRMSVILGCPDMTFKVFVKGADNSMLKVMGENLNMDIIQSTKAHLYSYSSKGLRTLVIGMKELSSSNFDKWHMMFEEASTALIGRAAKLRKVASCIENNLFILGASGIEDKLQKGVPEAIEALRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSAESCKRKLEDAIIMTKKLATASGVALDNERSTEVVTTSVALIIDGSSLVHILDSELEEQLFQLSCNCSVVLCCRVAPLQKAGIVALVKRRTSDMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTGYSLTTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLSYPQLYGAGHRQESYNSKLFWLTMIDTVWQSIAIFFIPLLAFWATTVDISGLGDLWLLATVIVVNLHLSMDVVRWYTVTHAVIWGSTVATVICVIVLDSILSLPGYWAIYHVAGTASFWLCLLSIVVVALLPRFVVKYLYQSYCPCDIQIAREADKFGWTRELGVVQTEMSPVLNNPSQENHNSLGCFRIILLLPVAIQRIGNINSSSPLRKSMANGLMKLTRFASRSSLLPRHWHQPSSFSRLGAQEFLQTAEVMSGSETNVSKRVAVTTLDEAKRALPDTYATVRELLTPLKSGIAKRSAVYVCDIPKDALGANGKAVLSRWQDARASVVKFSTLGVTSRCDMSARGPCFARFMSSKSSEKHGQTASESKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLILESYMPA 1572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20594170 20605893 - CePI673135_08g008790.1 Cec08g0879 209521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0879 1572 Gene3D - 750 952 IPR023214 -
Cec08g0879 1572 Gene3D - 596 730 IPR023299 GO:0000166(InterPro)
Cec08g0879 1572 Pfam TIM21 1432 1558 IPR013261 GO:0005744(InterPro)|GO:0030150(InterPro)
Cec08g0879 1572 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 766 IPR023299 GO:0000166(InterPro)
Cec08g0879 1572 FunFam Mitochondrial import inner membrane translocase subunit tim21 1459 1572 - -
Cec08g0879 1572 Gene3D - 179 350 - -
Cec08g0879 1572 FunFam Phospholipid-transporting ATPase 752 952 - -
Cec08g0879 1572 MobiDBLite consensus disorder prediction 34 95 - -
Cec08g0879 1572 Pfam E1-E2 ATPase 209 449 - -
Cec08g0879 1572 FunFam Phospholipid-transporting ATPase 597 730 - -
Cec08g0879 1572 NCBIfam phospholipid-translocating P-type ATPase 123 1187 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cec08g0879 1572 Pfam Phospholipid-translocating ATPase N-terminal 109 175 IPR032631 -
Cec08g0879 1572 NCBIfam HAD-IC family P-type ATPase 882 995 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec08g0879 1572 NCBIfam HAD-IC family P-type ATPase 425 514 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec08g0879 1572 SFLD Haloacid Dehalogenase 477 963 - -
Cec08g0879 1572 SFLD p-type atpase 477 963 IPR044492 -
Cec08g0879 1572 SUPERFAMILY HAD-like 480 953 IPR036412 -
Cec08g0879 1572 Gene3D Mitochondrial import inner membrane translocase subunit Tim21 1463 1570 IPR038552 -
Cec08g0879 1572 Pfam Cation transport ATPase (P-type) 601 677 - -
Cec08g0879 1572 SUPERFAMILY Calcium ATPase, transduction domain A 206 347 IPR008250 -
Cec08g0879 1572 MobiDBLite consensus disorder prediction 38 74 - -
Cec08g0879 1572 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Cec08g0879 1572 PRINTS P-type cation-transporting ATPase superfamily signature 912 931 - -
Cec08g0879 1572 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 1178 IPR023298 -
Cec08g0879 1572 MobiDBLite consensus disorder prediction 1 22 - -
Cec08g0879 1572 ProSitePatterns E1-E2 ATPases phosphorylation site. 495 501 IPR018303 -
Cec08g0879 1572 Pfam Phospholipid-translocating P-type ATPase C-terminal 940 1179 IPR032630 -
Cec08g0879 1572 FunFam Phospholipid-transporting ATPase 181 350 - -
Cec08g0879 1572 CDD P-type_ATPase_APLT_Dnf-like 125 1072 - -
Cec08g0879 1572 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 97 1179 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0763 Cec-Chr4:26977531 Cec08g0879 Cec-Chr8:20594170 0.00E+00 dispersed
Cec08g0879 Cec-Chr8:20594170 Cec09g0074 Cec-Chr9:619213 2.60E-176 dispersed
Cec08g0879 Cec-Chr8:20594170 Cec01g1685 Cec-Chr1:31468922 1.70E-180 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0879 K14802 - csv:101212953 2253.4