Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0879 | ATGGCGTCAGAGCGGCCGCTACTGATTATATCTCCAAAAACACCCAAGGCTGTCTCTCACGATCTACAGAAACAGGAGTTGAACCAACCTGGATTGTTCTTCGCCATGGATTCTCGAAGCCCTAATGAGAATTCACCAAGTATGGAAATGAGTTATCGCTCATTCTCGCGGCGAAGTCAATCATCGCTGCAATCGAAGTCCTCAATTCGTGAAGTGGGTTCTAGTGATTTTGGATCGAGGCCTGTTCGTCATGGTTCTCGAGGTGCTGATTCTGAAGCATTGAGCATATCCCAGAAGGAGATCAGTGATGAAGATGCGAGGTTAATTTACATTGATGATCCCGAAAAGACAAACGAGAAGTTTGAATTCGCTAGAAATTCGATTCGCACCGGCAAGTATTCGATTCTTACTTTTCTGCCCAGGAATCTATTTGAACAATTTCATAGAATTGCTTATATATATTTCCTTGTTATTGCGGTTCTCAATCAACTTCCCCAGCTTGCTGTTTTTGGTCGGGGAGTTTCCATTTTGCCTTTAGCTTTTGTGCTGCTAGTTACTGCATTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAAATTGAGAACAATAGATTAGCTTCAGTTTTGGTAGATGGTCAGTTTCAACCCAAGAAATGGAAGAATATTAGAGTTGGTGAGATAATTAAGATTGGTGCAAATGACACCATTCCTTGTGATATGGTGCTTCTTTCTACCAGTGATTCCACAGGGGTTGCATATGTGCAAACTCTGAATTTGGATGGGGAATCAAATTTGAAAACCCGGTATGCAAAACAGGAGACGATGTCTAAAATGCCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAAACCCAATAGGAATATTTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGTCTTTCTCTTGGACCTCCGAACATAGTTCTTCGTGGCTGTGAGCTCAAGAATACCAGTTGGGCTGTTGGTGTTGCTGTTTATGCTGGCCGTGAGACGAAAGCCATGCTTAACAGTTCTGGAGCTCCATCAAAAAGAAGTCGACTCGAGACTCGCATGAACGTGGAGATTGTTATGCTCTCTCTCTTTCTTGTTGCTTTGTGTACCGTTGTTTGTGTTTTGGCTGCTATTTGGTTCATCAGAAACAGGGAAGATTTGGACATTTTACCTTATTTCAGAAATAAGGACTTCTCAGAGGACCCACCTGAAACCTATAATTACTATGGATGGGGATTGGAGGCGTTTTTTGTGTTCCTCATGTCGGTTATTGTGTTCCAGATCATGATCCCCATTTCACTCTACATTTCAATGGAGGTTGTTCGTATTGGCCAGGCTTATTTCATGATCCGAGACACCCAAATGTATGACGAAACATCAAATTCAAGATTTCAGTGTCGGGCTTTGAACATAAATGAGGATTTAGGACAAATAAAGTATGTGTTTTCGGACAAAACAGGTACCCTTACCGAGAATAAGATGGAATTTCGATGTGCAAGCATATGGGGGGTCGATTATGGAGGTGAAAGTACCAATCCCCTCGACGAGCAGATTGGATACTCTGTTCGAGTGAATGGAAAGGTTTTGAGACCGAAATTGGGTGTCAAAACTGATCCTGAGCTTCTACAATTATCGAGAAGTGGAAAACACACCAAGGATGGAAGATACATTCATGATTTCTTCCTCGCTTTAGCTGCTTGCAATACCATCGTTCCTCTCATTACCGAAACTTCTGATCCTTCAGTGCAATTAATTGACTACCAAGGGGAGTCTCCAGATGAACAGGCATTGGTTTATGCTGCAGCAGCATATGGTTTTATGCTAATTGAACGAACTTCTGGCCATATAGTTATTGACATACATGGTGAAAAACAAAGGTATAATGTTTTGGGAATGCACGAGTTTGATAGTGACAGGAAGAGGATGTCGGTGATACTGGGGTGTCCTGATATGACCTTTAAAGTATTTGTAAAAGGTGCTGATAACTCCATGCTCAAGGTGATGGGTGAAAATCTGAACATGGATATCATTCAATCGACTAAAGCTCATCTTTATTCATACTCATCAAAGGGTCTCAGAACACTGGTTATTGGGATGAAAGAACTCAGTTCCTCCAACTTTGATAAATGGCACATGATGTTTGAGGAAGCAAGTACCGCTTTGATTGGTAGGGCTGCTAAGCTTCGCAAGGTTGCCAGCTGTATTGAAAACAATTTGTTCATATTAGGTGCCTCAGGCATTGAGGATAAGTTACAAAAAGGTGTGCCAGAAGCCATAGAAGCTTTAAGAACCGCGGGAATTAAAGTATGGGTTTTGACTGGAGACAAGCAAGAAACTGCCATATCAATAGGTTACTCCTCAAAGCTCTTGACAAACAAGATGACCCAAATTATAATTAACAGCAACTCGGCAGAATCATGCAAAAGGAAATTAGAAGATGCAATAATCATGACGAAGAAGCTTGCTACTGCCTCAGGCGTTGCACTGGATAATGAAAGAAGCACTGAAGTTGTAACAACTTCGGTTGCGTTGATCATTGATGGCAGCAGCCTCGTTCATATTCTTGACAGTGAACTGGAAGAACAGCTTTTCCAACTATCTTGTAACTGTTCGGTGGTGTTATGTTGTCGAGTCGCTCCATTGCAAAAGGCTGGCATTGTTGCTCTTGTGAAGCGAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCGAATGACGTGTCAATGATCCAAAAGGCAGATGTGGGTGTTGGTATCAGTGGTTTAGAGGGTCGACAAGCTGTTATGGCATCAGATTTTGCCATGGGACAATTTAGATTTTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGGATGGGCTACATGATCTTGTACAACTTTTACAGAAATGCAGTATTTGTTCTTGTTCTATTCTGGTATGTGCTCTTTACCGGTTACTCGTTGACGACGGCGATCAACCAATGGAGTAGTGTGCTTTACTCAATAATCTATACTTGTTTGCCCACTATTGTTGTTGGAATTCTTGACAAGGACTTGGGAAGAAGGACTCTTCTTAGTTACCCTCAACTCTATGGGGCTGGCCATAGACAGGAAAGCTACAATTCTAAATTGTTTTGGTTAACAATGATTGACACTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCCTTGCATTTTGGGCTACCACTGTCGACATTTCAGGCCTCGGAGATCTGTGGCTACTCGCCACAGTCATTGTTGTCAACTTACATTTATCAATGGACGTGGTTCGATGGTATACTGTCACTCATGCTGTGATCTGGGGATCCACTGTCGCAACTGTCATTTGTGTCATTGTTCTTGATTCGATATTGTCGCTTCCTGGTTACTGGGCAATATATCATGTGGCGGGCACAGCATCTTTTTGGCTATGTTTGTTATCTATCGTCGTAGTAGCATTACTTCCTCGTTTCGTCGTAAAATACCTTTATCAGTCTTACTGTCCATGTGACATCCAAATAGCAAGAGAGGCTGATAAGTTTGGATGGACAAGAGAGCTGGGAGTTGTACAAACAGAGATGAGCCCAGTCCTCAACAATCCTTCACAAGAAAATCACAATTCTTTAGGCTGCTTCAGAATAATTCTCCTGTTGCCCGTTGCCATCCAAAGGATAGGAAATATCAATTCTTCATCACCTCTAAGAAAATCAATGGCGAACGGACTAATGAAACTGACCCGCTTCGCCTCTCGCTCTTCTCTCCTTCCCCGTCATTGGCACCAGCCCTCTTCATTTTCTCGTCTTGGTGCTCAGGAATTTCTCCAGACAGCTGAGGTGATGAGCGGAAGTGAGACGAATGTTTCTAAAAGAGTTGCTGTAACTACCCTTGACGAGGCGAAGAGGGCCTTACCAGATACTTATGCTACTGTAAGAGAGCTGCTTACTCCACTGAAGTCTGGCATTGCCAAACGATCTGCTGTGTATGTGTGCGATATTCCTAAGGATGCACTTGGAGCTAATGGTAAGGCTGTTTTATCTAGATGGCAGGATGCAAGGGCATCTGTTGTCAAATTTTCAACATTAGGTGTCACCAGTAGATGTGATATGAGTGCCAGAGGGCCGTGCTTTGCGAGGTTTATGTCATCAAAATCTTCAGAGAAACATGGACAAACTGCATCTGAGAGCAAAAAAGAAATATCAACAGTGGAGGATCCATTTGATGCTCCTACATATAATATACCAGAGAAGCCTGTTACATTTGCAGAGGGAGCTTCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCTGCTGCTGGATACGCAGTTTTTAAGGAGCTTATATTTCAACCAAAAGAGTACAAGATCTTTGACAAGGCTCTTAAAAGGATTCAAGATGACAGCCAGGTTAGGGTAAGGATTGGTTCCCCTATAACCGGTTATGGGCAAGAAACTAGAAATCGAGCTGCTCGCCAACGTATCCCTAATAGGGTATGGACTGACGAAGATGGTGTAGAGCGAGTAGAGGTGAATTTTTATATCCGTGGGCCCCATGGAGCTGGGAAAGTTTATACTGAGATGTTCAAGGATCAAGTGGACAAGCAGTGGAAGTTCACATACTTGATCGTCGAGGTGAAATCGCCTTCTCCGGCCCAATTGATCCTAGAATCTTATATGCCTGCCTGA | 4719 | 42.81 | MASERPLLIISPKTPKAVSHDLQKQELNQPGLFFAMDSRSPNENSPSMEMSYRSFSRRSQSSLQSKSSIREVGSSDFGSRPVRHGSRGADSEALSISQKEISDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLLVTAFKDAYEDWRRHRSDKIENNRLASVLVDGQFQPKKWKNIRVGEIIKIGANDTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNVEIVMLSLFLVALCTVVCVLAAIWFIRNREDLDILPYFRNKDFSEDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMEVVRIGQAYFMIRDTQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESTNPLDEQIGYSVRVNGKVLRPKLGVKTDPELLQLSRSGKHTKDGRYIHDFFLALAACNTIVPLITETSDPSVQLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGEKQRYNVLGMHEFDSDRKRMSVILGCPDMTFKVFVKGADNSMLKVMGENLNMDIIQSTKAHLYSYSSKGLRTLVIGMKELSSSNFDKWHMMFEEASTALIGRAAKLRKVASCIENNLFILGASGIEDKLQKGVPEAIEALRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSAESCKRKLEDAIIMTKKLATASGVALDNERSTEVVTTSVALIIDGSSLVHILDSELEEQLFQLSCNCSVVLCCRVAPLQKAGIVALVKRRTSDMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTGYSLTTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLSYPQLYGAGHRQESYNSKLFWLTMIDTVWQSIAIFFIPLLAFWATTVDISGLGDLWLLATVIVVNLHLSMDVVRWYTVTHAVIWGSTVATVICVIVLDSILSLPGYWAIYHVAGTASFWLCLLSIVVVALLPRFVVKYLYQSYCPCDIQIAREADKFGWTRELGVVQTEMSPVLNNPSQENHNSLGCFRIILLLPVAIQRIGNINSSSPLRKSMANGLMKLTRFASRSSLLPRHWHQPSSFSRLGAQEFLQTAEVMSGSETNVSKRVAVTTLDEAKRALPDTYATVRELLTPLKSGIAKRSAVYVCDIPKDALGANGKAVLSRWQDARASVVKFSTLGVTSRCDMSARGPCFARFMSSKSSEKHGQTASESKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLILESYMPA | 1572 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20594170 | 20605893 | - | CePI673135_08g008790.1 | Cec08g0879 | 209521 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0879 | 1572 | Gene3D | - | 750 | 952 | IPR023214 | - | |
Cec08g0879 | 1572 | Gene3D | - | 596 | 730 | IPR023299 | GO:0000166(InterPro) | |
Cec08g0879 | 1572 | Pfam | TIM21 | 1432 | 1558 | IPR013261 | GO:0005744(InterPro)|GO:0030150(InterPro) | |
Cec08g0879 | 1572 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 499 | 766 | IPR023299 | GO:0000166(InterPro) | |
Cec08g0879 | 1572 | FunFam | Mitochondrial import inner membrane translocase subunit tim21 | 1459 | 1572 | - | - | |
Cec08g0879 | 1572 | Gene3D | - | 179 | 350 | - | - | |
Cec08g0879 | 1572 | FunFam | Phospholipid-transporting ATPase | 752 | 952 | - | - | |
Cec08g0879 | 1572 | MobiDBLite | consensus disorder prediction | 34 | 95 | - | - | |
Cec08g0879 | 1572 | Pfam | E1-E2 ATPase | 209 | 449 | - | - | |
Cec08g0879 | 1572 | FunFam | Phospholipid-transporting ATPase | 597 | 730 | - | - | |
Cec08g0879 | 1572 | NCBIfam | phospholipid-translocating P-type ATPase | 123 | 1187 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Cec08g0879 | 1572 | Pfam | Phospholipid-translocating ATPase N-terminal | 109 | 175 | IPR032631 | - | |
Cec08g0879 | 1572 | NCBIfam | HAD-IC family P-type ATPase | 882 | 995 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cec08g0879 | 1572 | NCBIfam | HAD-IC family P-type ATPase | 425 | 514 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cec08g0879 | 1572 | SFLD | Haloacid Dehalogenase | 477 | 963 | - | - | |
Cec08g0879 | 1572 | SFLD | p-type atpase | 477 | 963 | IPR044492 | - | |
Cec08g0879 | 1572 | SUPERFAMILY | HAD-like | 480 | 953 | IPR036412 | - | |
Cec08g0879 | 1572 | Gene3D | Mitochondrial import inner membrane translocase subunit Tim21 | 1463 | 1570 | IPR038552 | - | |
Cec08g0879 | 1572 | Pfam | Cation transport ATPase (P-type) | 601 | 677 | - | - | |
Cec08g0879 | 1572 | SUPERFAMILY | Calcium ATPase, transduction domain A | 206 | 347 | IPR008250 | - | |
Cec08g0879 | 1572 | MobiDBLite | consensus disorder prediction | 38 | 74 | - | - | |
Cec08g0879 | 1572 | PRINTS | P-type cation-transporting ATPase superfamily signature | 493 | 507 | - | - | |
Cec08g0879 | 1572 | PRINTS | P-type cation-transporting ATPase superfamily signature | 912 | 931 | - | - | |
Cec08g0879 | 1572 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 122 | 1178 | IPR023298 | - | |
Cec08g0879 | 1572 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cec08g0879 | 1572 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 495 | 501 | IPR018303 | - | |
Cec08g0879 | 1572 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 940 | 1179 | IPR032630 | - | |
Cec08g0879 | 1572 | FunFam | Phospholipid-transporting ATPase | 181 | 350 | - | - | |
Cec08g0879 | 1572 | CDD | P-type_ATPase_APLT_Dnf-like | 125 | 1072 | - | - | |
Cec08g0879 | 1572 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 97 | 1179 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0763 | Cec-Chr4:26977531 | Cec08g0879 | Cec-Chr8:20594170 | 0.00E+00 | dispersed | |
Cec08g0879 | Cec-Chr8:20594170 | Cec09g0074 | Cec-Chr9:619213 | 2.60E-176 | dispersed | |
Cec08g0879 | Cec-Chr8:20594170 | Cec01g1685 | Cec-Chr1:31468922 | 1.70E-180 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0879 | K14802 | - | csv:101212953 | 2253.4 |