Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0887 ATGGGTTTACGTTTAGGGTTTTCTCAGTTATTGATCAGTGGGGGCTATTGGTTTTGCATTATGTATTTGCATGCAGGGTTTTATCTACCATTCACTCTGTCCAATGTTTGGCATTGGCCATCAATTTCTGGGTTTTATTGGAATGAGTATGTTCTACTGATTACTTCTAAAACCCTTTATGATAATTTCGTTGGATTGCTTCACACCATATCTGCTTGGGTTCTCAAAATCGAGTTGAATGAGGTGGATTCACTACCTGCCGGAGGTGATCCAAATGGCAAACAATCACAATTCCAGCCATTGGTTCGTCAAAATTCACTGTATAGCCTCACACTGGATGAGGTTCAAAATCAGTTGGGTGATCTAGGAAAGCCTTTAATCAGCATGAACCTTGATGAGCTTCTTAAAAATGTGTGGACTGCTGAGGCCAACCAAACTGTTGGTAAAGACAATGAGGACAATAATGTCTTGGCCAATCAAACATCCCTACAACGTCAGGCTAGTCTTTCATTGAATGGTGCTCTGAGTAAAAAGACTGTCGATGAGGTGTGGAGAGACATTCAACAAAGCAAAGACAGTGAGGAGAAGAAGTCTCGTGAACGGCAACCTACGTTGGGAGAGATGACATTGGAAGATTTTCTGGTGAAAGCAGGGGTGGTTGCTGAGACATCGTCAAATAAAAAAGGTGCGGGTCCTGTTGTTGAAATTGACGCAAATATCACACCCCAGTTTCAACAAACGCAGTGGATGCCGTACCCTCAACCTCAGTATCAGTCTCAACAAGCAGCAATGATGGGGGTTTACATGTCAGGCCAGCCTATTCCCCAGCCACTGCATGTGGGAGGTGGTGCCGTGATGGATGTTCCATATGTAGACAACCAGTTGGCATTGCCAACTCCTTTGATGGGAGCTTTATCTGATACACAGACATCTGGAAGAAAAAGGGGAGCGCCTGAAGACATGATTGAGAAAACTGTTGAGCGTAGACAGAAGAGGATGATAAAGAACCGGGAATCTGCCGCTCGTTCACGAGCAAGGAAGCAGGCATATACCAATGAACTGGAGAATAAAGTTTCACGTTTGGAAGAGGAGAATGAAAGGCTCAGGAAACGGAAGGAGCTGGAAAAGATGCTACCGTTGGCTCCCTCACCTGAGCCGAAGTATCAGCTTCGAAGAACTTCGTCAGCGCCGTTCTAA 1197 44.86 MGLRLGFSQLLISGGYWFCIMYLHAGFYLPFTLSNVWHWPSISGFYWNEYVLLITSKTLYDNFVGLLHTISAWVLKIELNEVDSLPAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKNVWTAEANQTVGKDNEDNNVLANQTSLQRQASLSLNGALSKKTVDEVWRDIQQSKDSEEKKSRERQPTLGEMTLEDFLVKAGVVAETSSNKKGAGPVVEIDANITPQFQQTQWMPYPQPQYQSQQAAMMGVYMSGQPIPQPLHVGGGAVMDVPYVDNQLALPTPLMGALSDTQTSGRKRGAPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPLAPSPEPKYQLRRTSSAPF 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20683977 20688745 + CePI673135_08g008870.1 Cec08g0887 209529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0887 398 CDD bZIP_plant_BZIP46 328 382 - -
Cec08g0887 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 326 371 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0887 398 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 103 396 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cec08g0887 398 Coils Coil 344 378 - -
Cec08g0887 398 SUPERFAMILY Leucine zipper domain 328 373 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0887 398 SMART brlzneu 324 396 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0887 398 Pfam bZIP transcription factor 328 375 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0887 398 Gene3D - 326 379 - -
Cec08g0887 398 MobiDBLite consensus disorder prediction 333 398 - -
Cec08g0887 398 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 331 346 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g0887 398 MobiDBLite consensus disorder prediction 333 378 - -
Cec08g0887 398 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 326 378 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1487 Cec-Chr3:32914446 Cec08g0887 Cec-Chr8:20683977 2.40E-49 dispersed
Cec08g0887 Cec-Chr8:20683977 Cec10g1921 Cec-Chr10:33981053 6.40E-31 dispersed
Cec08g0887 Cec-Chr8:20683977 Cec08g1653 Cec-Chr8:27871465 1.20E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30050 PF00170 bZIP_1 4.60E-13 CL0018 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0887 K14432 - csv:101213915 563.148