Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g0899 ATGCTCTTGAAGCCCTTCAACACCGTCGCCGTCGTATTCATGCTCGCTTTCGCATTCTTCATCATCTTCTTCACTGGCTTCCTCGAATTTCCACCGGCATCCACTTCCATCGTACCGCCCACCGACGATCTGAATCTCTCCGCACCCGAATTCGCTTCCGAACCTTTCACTGATTTGATCACCGCCTTTAAGAAATGGGACTCTCAGGTGGGTTGTGATCGTTTCCGGGAGAAAATTGGCGGCGGTTTGGGGAATGGCTCTTCGTCGGGTTCGCTGCAGCAAGTCGGCGGCGACTCTAATTCGGAATGTGGGGGGCTGAAACTGAATCATGTTGCTGTTTTAGTGAAAGGATGGACTTGGATTCCTGATAATTTAGACAATTTGTATTCGTGTTCTTGTGGATTGAGCTGTCTTTGGACTAAATCTTCTGTTCTTGCCGATAAACCTGACGCCTTGTTCTTCGAAACCAGTACGCCTCCACGGCAGAGGCGCAGAGGAGATCCTCTTCGCATATACATGGATCTCGAGGCTGGTCGGAAGCGCTCAGGTTTTGAGGATCTTTTCGTTAGTTATCATGCTGAAGATGACGTTCAGTCCACTTATGCAGGAGCACTATTTCACAACGGCCGAAACTATCACGTATCTTCTTCTAAAAACAATGATACACTCGTTTATTGGTCATCGTCTCGTTGTCTTCCCCAAAGAAATCAGCTTGCTAGGAAGCTTCTAAGCTTGCTGCCTCACCATTCATTTGGCAAGTGCTTGAACAATGTAGGCGGACTCGATATGGCCCTTTCGATGTACCCTGAATGTGCAAATGATGCCAGTGTCACCCCGAAATGGTGGGATCACTTGCATTGTGCAATGTCTCACTACAAATTTGTTCTTGCAATTGAAAACACAATGACTGAGAGTTATGTAACGGAGAAGCTATTTTACGCACTAGACTCCGGTTCAGTTCCGATCTATTTTGGTGCCCCTAATGTCTGGGACTTTGTTCCTCCACATTCTATAATTGATGGGTCTAAATTCAGCTCCTTGGAAGAGTTAGCTTCTTGCATAAAGCGACTTGCAGATGATCCAGTAGCTTATGCTGAGTACCATGCTTGGAGACGATGCCGTGCATTAGGTAACTATAGAAGGACCCGAGCTGCGAGTCTCGACACGCTGCCATGTCGGGTGTGTGATGCTGTGAGCAGAAGGGGTGGTAGAAATGCTTGA 1221 47.5 MLLKPFNTVAVVFMLAFAFFIIFFTGFLEFPPASTSIVPPTDDLNLSAPEFASEPFTDLITAFKKWDSQVGCDRFREKIGGGLGNGSSSGSLQQVGGDSNSECGGLKLNHVAVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSSVLADKPDALFFETSTPPRQRRRGDPLRIYMDLEAGRKRSGFEDLFVSYHAEDDVQSTYAGALFHNGRNYHVSSSKNNDTLVYWSSSRCLPQRNQLARKLLSLLPHHSFGKCLNNVGGLDMALSMYPECANDASVTPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASCIKRLADDPVAYAEYHAWRRCRALGNYRRTRAASLDTLPCRVCDAVSRRGGRNA 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20804203 20807077 + CePI673135_08g008990.1 Cec08g0899 209541

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g0899 406 PIRSF FucT_plant 1 406 IPR017177 -
Cec08g0899 406 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 109 401 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Cec08g0899 406 Gene3D - 171 379 IPR038577 -
Cec08g0899 406 FunFam Alpha-(1,4)-fucosyltransferase 170 376 - -
Cec08g0899 406 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 101 400 - -
Cec08g0899 406 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 401 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g0899 K14412 - - csv:101216230 768.844
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec05g2639 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.1 8.3e-159 557.4
Cec01g1754 . 113 583 Xyloglucan Fucosyltransferase1 AT1G14080 54.6 3.2e-150 528.9
Cec05g2639 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.7 8.0e-167 583.9
Cec01g1754 . 115 583 Xyloglucan Fucosyltransferase1 AT1G14100 58.1 6.6e-161 564.3
Cec07g1174 . 58 545 Xyloglucan Fucosyltransferase1 AT1G14100 50.1 7.5e-141 497.7
Cec05g2639 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.3 3.2e-138 488.8
Cec01g1754 . 106 585 Xyloglucan Fucosyltransferase1 AT1G14110 51.4 1.2e-132 470.3
Cec02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT1G49710 65.2 2.5e-192 668.7
Cec05g1183 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 61.5 1.4e-182 636.3
Cec08g0899 . 7 406 Xyloglucan Fucosyltransferase1 AT1G71990 69.3 5.6e-168 587.4
Cec05g2639 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.4 5.7e-126 448.4
Cec05g2639 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.2 1.1e-180 630.2
Cec01g1754 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.2 2.1e-168 589.3
Cec07g1174 . 64 545 Xyloglucan Fucosyltransferase1 AT2G03210 50.2 2.1e-136 483.0
Cec05g2639 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.0 2.4e-201 698.7
Cec01g1754 . 59 581 Xyloglucan Fucosyltransferase1 AT2G03220 61.4 2.3e-188 655.6
Cec05g2639 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.7 1.8e-155 546.2
Cec01g1754 . 95 584 Xyloglucan Fucosyltransferase1 AT2G15350 50.1 2.1e-143 506.1
Cec05g2639 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.1 5.4e-150 528.1
Cec01g1754 . 106 584 Xyloglucan Fucosyltransferase1 AT2G15370 50.4 8.1e-138 487.6
Cec05g2639 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 54.9 4.0e-153 538.5
Cec01g1754 . 115 583 Xyloglucan Fucosyltransferase1 AT2G15390 52.5 2.4e-142 502.7
Cec02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT3G19280 64.5 1.0e-190 663.3
Cec05g1183 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 62.8 8.3e-185 643.7
Cec05g2639 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.4 5.7e-126 448.4
Cec05g2639 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.2 1.1e-180 630.2
Cec01g1754 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.2 2.1e-168 589.3
Cec07g1174 . 64 545 Xyloglucan Fucosyltransferase1 AT2G03210 50.2 2.1e-136 483.0
Cec05g2639 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.0 2.4e-201 698.7
Cec01g1754 . 59 581 Xyloglucan Fucosyltransferase1 AT2G03220 61.4 2.3e-188 655.6
Cec05g2639 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.2 1.1e-180 630.2
Cec01g1754 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.2 2.1e-168 589.3
Cec07g1174 . 64 545 Xyloglucan Fucosyltransferase1 AT2G03210 50.2 2.1e-136 483.0
Cec05g2639 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.4 5.7e-126 448.4
Cec05g2639 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 54.9 4.0e-153 538.5
Cec01g1754 . 115 583 Xyloglucan Fucosyltransferase1 AT2G15390 52.5 2.4e-142 502.7
Cec05g2639 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.1 5.4e-150 528.1
Cec01g1754 . 106 584 Xyloglucan Fucosyltransferase1 AT2G15370 50.4 8.1e-138 487.6
Cec05g2639 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.1 8.3e-159 557.4
Cec01g1754 . 113 583 Xyloglucan Fucosyltransferase1 AT1G14080 54.6 3.2e-150 528.9
Cec05g2639 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.7 8.0e-167 583.9
Cec01g1754 . 115 583 Xyloglucan Fucosyltransferase1 AT1G14100 58.1 6.6e-161 564.3
Cec07g1174 . 58 545 Xyloglucan Fucosyltransferase1 AT1G14100 50.1 7.5e-141 497.7
Cec05g2639 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.3 3.2e-138 488.8
Cec01g1754 . 106 585 Xyloglucan Fucosyltransferase1 AT1G14110 51.4 1.2e-132 470.3
Cec05g2639 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.7 1.8e-155 546.2
Cec01g1754 . 95 584 Xyloglucan Fucosyltransferase1 AT2G15350 50.1 2.1e-143 506.1
Cec02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT3G19280 64.5 1.0e-190 663.3
Cec05g1183 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 62.8 8.3e-185 643.7
Cec02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT1G49710 65.2 2.5e-192 668.7
Cec05g1183 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 61.5 1.4e-182 636.3
Cec08g0899 . 7 406 Xyloglucan Fucosyltransferase1 AT1G71990 69.3 5.6e-168 587.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010578 1 1 1 1 1 1 2 1 1 0 0 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 1 1 1 32