Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0914 | ATGGACTTTACAGTTCTAAATTCAGAGTTGTGCTCTCTCAAATGTGATTCCATGGCCGTCAAGGGCATCAAGAGACGGCGGAGAACTGCTTCTTCTTCCCCCACAGTTGGTGGTGGAGATGCTCAACCACACAAGTCAATGGCAGATCATTCCACTGCCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGACATCGATGGACGGGGCGATTTGAAGCTCATTTATGGGACAAAGGGTCTTGGAATCCAACACAAAGGAAGAAGGGAAAACAAGGAGCTTATGATGAAGAAGAATCAGCTGCTAGGGCATATGACTTAGCTGCACTCAAGTATTGGGGAACATCAACTTTCACTAATTTTTCGAATGTTGCAGAGGTTTCATTGCTGGCTATCAAAGCATTGTTTGGAACATCAAATGCAGTGGAGCGAGAGAGAAAGAGGAGATCGAGTCTATCTAGGGGCTGTAATGAGGTTGGATTGAAATGTAATGAAATGAATTTGGATTCTAATCCCAGTTCGATCTATGATTTATTGTTCATGGACATTGATAAGATTCTTCCATTTAGCAGTACCTTAGAATGTCATAACCTTAAAAATAAGGGCGATGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAAGCACCCAGAGATGAGGAAGAGCGTAATATCTGATTATGAGGATGAGATTGAGATGATGAAAAATGTGACAAAGGAGGAATACTTGGCCTCTTTAAGAAGGAGAAGCAGTGGTTTCTCAAGAGGTGTATCAAAATATCGGGGAGTCGCCAGACACCATCACAATGGGAGGTGGGAAGCAAGAATTGGAAGAGTTTTTGGCAACAAATATTTGTACCTTGGAACTTACAGTACACAAGAGGAGGCAGCAAGGGCATACGACATAGCAGCTATAGAATACAGAGGCATAAACGCAGTGACCAACTTCGATTTGAGCACTTACATAAGTTGGCTTAAACCCCAACAACACCATCCAAATCCAAAACAATCTTCTCCACCAATTTCCTCTTTCTTTCCAATTGATACACCTCCTAATAATAATACCCTACAATCTTCCAATGATAATCTTCACTTTCCTATCTTCCAACCCCTCAATAATGATGATACTAATAATAATGTCATTATTCCCACTGCCCCACAAACTTCCCCTCGCACAGCCCTTGGCCTCCTCCTCAAATCCTCCCTCTTCAAACACCTTGTGGAGAAGAACATTGTGAATAATGTCAATGAAGAGGAGTACTGCTCCAATGATGAAGAAGCTAGAGGCCTACTCTCCTTTGCTCATTCTAATAATCCCTACTTGGATTTGCACTATCCATGTCAAGGAACCACCAACTTATCACTCTCCACCCCTCTCCATTACTCCACTTTACCAATGTCGCAAATTTAG | 1410 | 42.34 | MDFTVLNSELCSLKCDSMAVKGIKRRRRTASSSPTVGGGDAQPHKSMADHSTATKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSNVAEVSLLAIKALFGTSNAVERERKRRSSLSRGCNEVGLKCNEMNLDSNPSSIYDLLFMDIDKILPFSSTLECHNLKNKGDVQTKKGLRWIPKHPEMRKSVISDYEDEIEMMKNVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYISWLKPQQHHPNPKQSSPPISSFFPIDTPPNNNTLQSSNDNLHFPIFQPLNNDDTNNNVIIPTAPQTSPRTALGLLLKSSLFKHLVEKNIVNNVNEEEYCSNDEEARGLLSFAHSNNPYLDLHYPCQGTTNLSLSTPLHYSTLPMSQI | 469 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20976427 | 20989610 | - | CePI673135_08g009140.1 | Cec08g0914 | 209556 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0914 | 469 | CDD | AP2 | 58 | 124 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | Gene3D | AP2/ERF domain | 58 | 123 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | Gene3D | AP2/ERF domain | 258 | 319 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | ProSiteProfiles | AP2/ERF domain profile. | 259 | 317 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | ProSiteProfiles | AP2/ERF domain profile. | 59 | 122 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | CDD | AP2 | 258 | 319 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | SUPERFAMILY | DNA-binding domain | 58 | 122 | IPR016177 | GO:0003677(InterPro) | |
Cec08g0914 | 469 | Pfam | AP2 domain | 258 | 309 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | SUPERFAMILY | DNA-binding domain | 258 | 319 | IPR016177 | GO:0003677(InterPro) | |
Cec08g0914 | 469 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 47 | 348 | - | - | |
Cec08g0914 | 469 | FunFam | AP2-like ethylene-responsive transcription factor | 258 | 319 | - | - | |
Cec08g0914 | 469 | SMART | rav1_2 | 259 | 323 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | SMART | rav1_2 | 59 | 128 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g0914 | 469 | MobiDBLite | consensus disorder prediction | 328 | 353 | - | - | |
Cec08g0914 | 469 | MobiDBLite | consensus disorder prediction | 23 | 61 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g0914 | Cec-Chr8:20976427 | Cec09g0344 | Cec-Chr9:2893611 | 4.50E-60 | dispersed | |
Cec02g0996 | Cec-Chr2:14511573 | Cec08g0914 | Cec-Chr8:20976427 | 1.80E-16 | transposed | |
Cec10g1500 | Cec-Chr10:29363872 | Cec08g0914 | Cec-Chr8:20976427 | 9.90E-77 | transposed | |
Cec05g2427 | Cec-Chr5:35504013 | Cec08g0914 | Cec-Chr8:20976427 | 4.70E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30053 | PF00847 | AP2 | 4.80E-09 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0914 | - | - | - | 0.0 |