Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g0955 | ATGTCGGGAACTGAAACTGGTGTGATCACCAGTAGAGAACCCTTCAGCGTCAGCGTTCAAAATAGCTCCTTACAGTCGCAGTCGGCGGCCCAAAATATGCGATTAGCCTTCAGCGCCGATGGCCCAGCCGTCTACAAGCCTGTGACTCCTTCAACCTCACCGTCCTACCAATCCTCCATGGCCGGAGTTTCTGGTAACGCCGGAATTGAAGGATCGGCTGGTGGAGGAGGGTCTATGTTGCCTCATGGTTTCAACATAAATTCAGTGGGCAGTGAGCAGATAAAGAGGAAGAGGGGCAGGCCAAGGAAGTATGGACCAGATGGCTCCATGGCTTTAGCTTTGGGTTCTGGGCCGCCATCAGGAAGTGGAGGTTTTCCTCCTTCAAATATGGCTAATTCTGCTTCTGAAGGATTGGGGTCACCAAATTCACTGAAGAAAACTAAAGGCAGGCCACCTGGTTCTAAGAAAAAGCAACAATTGGAAGCTTTAGGATCGGCTGGTATTGGATTCACTCCACATGTTATTGATGTGAAAGCTGGAGAGGATGTATCGTCAAAAATAATGTCCTTTTCTCAGAATGGCCCCAGAGCTATATGTATTCTGTCTGCAAATGGAGCAATATCAAATGTGACTTTACGTCAACCTGCTACATCTGGTGGTACTGTTACTTATGAGGGGCCGTTTGAAATTTTGTCACTTTCGGGTTCATTTCTCCTTTCTGAAAATGGTGGTCAGAGAAGCAGAACCGGTGGGTTGAGTGTGTCTTTGTCCGGTCCAGATGGCCGAGTTTTAGGTGGTGGTGTGGCGGGTCTTCTCACAGCATTATCTCCTGTTCAGGTGGTCGTGGGAAGTTTCATGGCCGACAGCAACAAGGAACCGAAGTCAGTGCGCCAAAATGAACCCATCACTGTCTCACCAATGCTAAACCCAGTTGGCTTCGGTCACTTGACAGGAGGAGCCAGTAGTCCATCTCATGGGACACTGAGCGAATCTTCCGGTGGCAGCCCCCTCAACAACAGCTCTGGAGCCTGTAACAACACCAACCATCCACAGGGCATGTCCGGCATGCCATGGAAATTTTTTCATATTGCTGGACTTGGTGGAATCAACAAATCCGTATTCTCCTGTTTCGTTTCACTGCTTCGGTGTTTTGTAAAGGGGAAAGGAAAAAGGATTAGGAATTGGGAAATAGTCATGGCTGTTCTTCCATTGGGAATACGCAGCAGGTGA | 1230 | 48.7 | MSGTETGVITSREPFSVSVQNSSLQSQSAAQNMRLAFSADGPAVYKPVTPSTSPSYQSSMAGVSGNAGIEGSAGGGGSMLPHGFNINSVGSEQIKRKRGRPRKYGPDGSMALALGSGPPSGSGGFPPSNMANSASEGLGSPNSLKKTKGRPPGSKKKQQLEALGSAGIGFTPHVIDVKAGEDVSSKIMSFSQNGPRAICILSANGAISNVTLRQPATSGGTVTYEGPFEILSLSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTALSPVQVVVGSFMADSNKEPKSVRQNEPITVSPMLNPVGFGHLTGGASSPSHGTLSESSGGSPLNNSSGACNNTNHPQGMSGMPWKFFHIAGLGGINKSVFSCFVSLLRCFVKGKGKRIRNWEIVMAVLPLGIRSR | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21395096 | 21404086 | + | CePI673135_08g009550.1 | Cec08g0955 | 209597 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g0955 | 409 | MobiDBLite | consensus disorder prediction | 72 | 159 | - | - | |
Cec08g0955 | 409 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 172 | 285 | IPR005175 | - | |
Cec08g0955 | 409 | MobiDBLite | consensus disorder prediction | 122 | 142 | - | - | |
Cec08g0955 | 409 | FunFam | AT-hook motif nuclear-localized protein 1-like | 172 | 302 | - | - | |
Cec08g0955 | 409 | MobiDBLite | consensus disorder prediction | 320 | 349 | - | - | |
Cec08g0955 | 409 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 170 | 287 | - | - | |
Cec08g0955 | 409 | Gene3D | - | 172 | 307 | - | - | |
Cec08g0955 | 409 | MobiDBLite | consensus disorder prediction | 315 | 349 | - | - | |
Cec08g0955 | 409 | CDD | DUF296 | 171 | 285 | IPR005175 | - | |
Cec08g0955 | 409 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 26 | 335 | IPR039605 | GO:0003680(InterPro) | |
Cec08g0955 | 409 | ProSiteProfiles | PPC domain profile profile. | 166 | 306 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0271 | Cec-Chr1:2730179 | Cec08g0955 | Cec-Chr8:21395096 | 1.10E-51 | dispersed | |
Cec02g1774 | Cec-Chr2:35577057 | Cec08g0955 | Cec-Chr8:21395096 | 2.60E-39 | dispersed | |
Cec06g0394 | Cec-Chr6:4428535 | Cec08g0955 | Cec-Chr8:21395096 | 1.50E-62 | dispersed | |
Cec08g0955 | Cec-Chr8:21395096 | Cec11g1942 | Cec-Chr11:33528232 | 5.70E-91 | dispersed | |
Cec08g0955 | Cec-Chr8:21395096 | Cec10g0178 | Cec-Chr10:1741462 | 3.20E-62 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g0955 | - | - | - | 0.0 |