Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1028 ATGGATTGGTGGGTTTTCAACCACTCGACACAGGAGAAAGGAGAAATAGAGGGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGAAGTCTCTACAGTTGACGAGCTGAGAGATTTGAAAGGAGTTCTAAAGAGGGAAATTGATGGGCCTATCAGATTTCCAAGCCTTCCACGCGTTGCTTCCCCTGACTTGGCTTCCTACTTTGTGTCGTATCAAGTTTCTTACGGATGGAAAATGGTAGAGAATTTGATGGAGGAAATGTCCCCGGCGGTTGTGGTGCCATTTAGGTTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAACTCCCATGGATATCACAAGACTTAAGCTAATGGCAGATACAGCTGGTTTGTTATCTGATTCTGTGACTAAGGCTTCTGATGACCTGACTGAAGTAGGTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGGTTGGTATCACTACAGTTTCGGGTATGAATGACAAGTGTGAAGGAGTTCCATTGTCAGTTGTGTTATCTCAAAATAATAGCAGTTGGGTTCCGGCAGATGAGTCAATATCCCATGGAAGTGAGGAAGATGATTCTTTATCTCTAGAGGGCGATCACATTTATGATAGCTCTTGTTCACATTCAGTGATTAGTGAGAATAGCAGCATTTGTGGTGATGATTTTTTAGGTTCTGAGGTGTCTTCTTTTGAAGCATTTGATTCCATCAGCAATCCAAAGGACATTAGCAGCGTTGAGATTGCAGCTAAAGCCAATATTGAAGAGACTAATGTTGAAAGTCTTGACTCTCAGATTGCGAGTTCTTCTTCTGCAGCAGCTAGCCTTGAAGAAGATGTTGGAGATGGGCTAGGCACTGAAGCATGTAATAACACGGTTCTTCAGCTGCCTCTTGAGAAAAAGGCAAGCGAACCAGTCGGTCGAAGTGTTTTTGAGGTAGATTGTGTTCCCCTTTGGGGATTTACATCGGTTTGTGGAAGAAGACCCGAGATGGAAGATGCAGTGGCAACTGTACCTAGGTTTTCAGAACTTCCTGTCCAAATGCTTGTTGGCGACCGAGTTCTTGATGGCTCAAACAAGGCTATAGCTCACCAAACCGTTCATTTTTTTGGGGTTTATGATGGTCATGGTGGCTCTCAGGTTGCGAATTTTTGTCGTGAACGTATGCATTTGGCTTTATCTGAGGAGATAGAACTTGCTAAGCAAGAAATAGCCGTTGGCAATGTTGAGGATAATTGCCAAGAGCTATGGAGAAAGGCATTCACCAACTGTTTTCTTAAAGTTGATGCTGAAATTGGAGGGGGACCTGGTGTTGAGCCTGTTGCGCCAGAAACTGTAGGCTCCACTGCTGTTGTTGCAATTATCTGTGCCTCTCACATTATTGTTGCAAACTGTGGAGACTCAAGAGCAGTTCTTTGTCGTGGGAAAGAGCCAATGGCATTGTCTGTGGATCATAAACCAAACAGAGAAGATGAATATGAAAGGATTGAGGCTGCAGGAGGAAAGGTCATACAGTGGAACGGGCATCGTGTTTTTGGTGTTCTTGCAATGTCGAGATCCATTGGTGATAGATACTTGAAACCATGGATCATCCCAGAGCCAGAAGTGATGTTCCTCCCTCGGGCAAAAGACGACGAATGCCTCGTTCTAGCGAGTGATGGTTTATGGGATGTGATGACCAATGAAGAGGTATGCGACCTGGCTCGAAGACGAATCCTACTTTGGCACAAGAAGAATGGCGTTAGTTTGCCTTCTGAGAGGGGGGTGGGGATCGATCCCGCAGCCCAAGCAGCCGCAGAATACCTCTCGAACCGAGCTCTTCAAAAGGGCAGCAAAGACAACATTACGGCGCGAGGACACGAAGCGACTTCGTTGGCCGAGAAATTTCCAAGAACCGCCTCGTCGTTCAGGCCGCTGTTACTTCGCCGACGGCCATTTGATGGAGTGGTAATATCTCAATCAATGGGAATCAAGAGAGAGAGTAAAAGCTCCACTTCTGCAACATCGCCGTGTGCTGATTTCAGGGCTGCATATCACAATTGTTTCAATCGATGGTACTCGGAGAAGTTTGTAAAAGGTCATTGGGATGAAAAACCCTGCGTCTCCGAGTGGCAGAAGTACAGAGCTTGCCTCTCTGAGCATTTGGATGATAAGAAGTTAAAGCGCTTCCTTGTTGATGGGAAGCAAACGGTTTACTTTCTGTTTTGTCGTGGTGAAGCTACCCAAATTATTGAATTTTGTGGCTCAACAGTGTTACCGGGAACCCTTTTATTTGTTGAGTCTGGGAATGGTGATGGCTTAGGGGAGTCTGATGGGGGACGGTTGCTTGAGGAAATTGAGGCAATAAGTAAAGCTCTGTACTTGCACAAGGGCCACACAAACTCAATTGTTTATCCCTCTGATGGACGGTCAGGATCCCACTTGGCTGAATCAAAATCAAGATTCAACGAGGGATATCATAAGGATGGGGAATCATTGGTGGATGAAACTGAAAGAAGGTCATCATCTACATGGAACTGGAAGAAATCTTTGAAAGCTCTTACTCATATTGGGCACCGCAAGTTCAACTGTGTATTCTATCTCAAAGTTCATTCCATAGAAGGCGTGCCTCCAAGTTTCAATGGTTATAGTTTAAGTGTACATTGGAAAAGGAAGGATGAGGTTTTGCAAACTCGTCCATCGAAGGTTTTCCAAGGCATGGCTGAATTTGATGAGACCTTGATCCACAAATGTGTGATATATGGTGGGAGAAGTTTGGCTAATCACTCGGCGAAATATGACCCTAAGCTTTACTTGATCTATGTTTCTATGCTTGGAGCACCAGGACTTGATTTTGGGAAGCATTGGGTTGACCTCACGAGGATTTTACCTCTTACCCTGGAGGAGCTTGAGGGGGATAAATGTTCTGGGAATTGGTCGACCAGCTTTCGACTTGCAGGCAATGCGAGAGGTGCTAGCCTAAACGTCAGTTTCAGTTTTTTAGTAACCAAGGACGATCCGATGAAATTGAGCGGTCCTGAAAATGTTGTCCAACTCCTGAAGTTATTGCACCATAAGTCAAGGATTTGTAACTATGATGCACACCCTACTTCAACCAATTTAAACGGGCCTCCAAGTCCAGATGGAAATATTTCGCATAGTCTAGAATATGAATCTATTACCTCTACTCAGATTTTTGACGAACTAAATCCAAAATTGGAGCTCTCCAAGTCGATTAACCTTTTATATGGTAAGATGGATGAGGCAGATCAGCATAAGTCAGAGCATTCAGGTTCTGAATTGGATGAGCAGCTCGAATTAAAATCTAACGAGGAAAACAAGTCTGATGAAGTAACTGGTGGAGGTAGTTATGACTCTGGTGAGTTTTCCGTTATTGAATGTGGGATTGAATTAGCTGGGACAGAAGATAGCTTGGATAAAGTTACTGTTCCGACTATTGAGGGCTCCAAAGTAGAAACTGTTTCTTTAGATGAGATCATAGAAGACGTCAAAGTTGCCATCGAGATGAAGTCAAGCGTCATGTTGAAGGATGCAGTTTGCGTTGTTCATGTAGATGACACCGCAGAGGACGACCTCGAATATGAAGAGAATAACCTAAAACTAAAAGTGGAAGAAGTTGCTTCAGATGAGTTGAGTTCAGATTCTGATCTCAAGTGGACATCACGCTCGGTGGAGACTGATTCTCCATTAGCTGTTGGCAAGCTTGTCGAACATGAAAACGATATGGATGCCAAGGAGAATTGTGCTAGAACATCTCTTAGCCTAGATGACTCTTATGAATCCGTGGCCAGTGATTTTCTAAAGATGCTGGGGTTGGAGCATGGTTCTGCGAGGTTTTCAGATCCTGATATATTGTCTCCTAGAGAGCGCTTATTGAGAGAATTTGAGGAGGAATCCCTAATTTTTGGTAATCCATTATTGGATTTTACAGCTACAGAAGAGTGGCAGGATTTTGGAAGTGTTGACATGGAGTTTGCTTCTGAAAATCAAGATGAGGATTTTGATTTTTCTTCCATTTATGTTGCTGAAGAAGTACAAGAGGAGGGGCATCATCAGTCCTTGAGAAATAGAAGGAACGCCAAAATTCTTGAAGACTTGGAGACGGAACATTTAATGAGAGAATTTGGCTTAAACGAGAGAGACTTTGAGCACTCTCCACATTATAGTTCAAGTGGATTTGGGAGTCCCATTGAGTTGCCCCTAGAAGAAGAGCCATCAAAGTTATCTTCACTTGGAGAAGGTTTTGGTGCATTTCTTAAGATGTACGGTGGCGGATTTTTGCAGTCCATGAGTCCTTGGCTCTCTCAGAACACTAGCATTGGACAGAGCTTAGTCATTCAATGTTCTGAACCAGTTGTTCTACCTGCTGAAATGGGTCATGATATTATGGAGATAGCACAGAATTTAGCATTGGCAGGAACTGAAAACCTTTCGACACTTGCTAAAAAGCTGATGCCGTTGGACGATATAACCGGGAAAACTCTCCAGCAAATGGTATCAGAATGTCCTCCCAGCAAAACATTGCTTGAGAGGGAGCCTATGATTGAGAATAACGTGTTGTGTAGTTCGGTTTCATTCTGCGAAAGGAAAGACCTTGAAGGATTGCCATCTCATCAAAACGATACTAGTCTTCAATCTCTTCTGAATTCCGAGATGGATCAAGACCTTGTGTCACCTGATGATCTAGCATTTCTGGCAATAGAAAAGATCGAAACTCTCCTAATAGAAGGATTAAGAATACAATCTGGCTTGACAAATGATGAGACGCCAGCACAAATCACTGCCCGCCCTTTTCATCGTGTGCCAGCCTGTCGACAGAGGCGTTCCAATTTGGGCGGTTCTTGTAGCTCGGAAGGATTAAAGGAACTGCAGTTTATTGATCGCCCCGATACAGCAAGTGATGTTGTTGGGTTGATGGATCTTTCTATAACATTGGAGCACTGGTTAAGGCTTGATGCTGGTAACATTAATGACGATGATGAAAATGGTCAGCACATTATGAAGACTCTTGTGGCCCATGGTGCTAACTATGCAGATATAATTGAAAGACTATCAAAAGATATCAACTCTGGGAAATCCAGCAAAGATCTGGGATTGTTTGGGAACAAGCTTGTGGTGGCTCTAATGGTGCAACTTAGAGATCACTTGCGAGACCATGAACCAGTTGGTGGCCCAATGATGTGCGTAATGGAGGCCGAGAGGCTTTTTATCAACACAGCTTGTGACACGGCCAGTGAAACGACCAATGTCAACAATGGGAGTGAACCATTGCAAGCACAAGAAGACAGTCATGAAACTAACAAGAGCCAGGAGAAAGCAGATGAAGGACACTTCGTTCGTGCATTTAAAATCTCTGCTATTCATCTTTTGGGTGTAAACTCTGTGCCTAATAAGATGCAATTCTGGGGAACCATGACGCAGCAGCAATCGGGATCCCGTTGGTTGCTTTCGAGTGGAATGGGTAGAAACTTCAAGCTCCCATTATCCAAGTCAAAAGCAATTGTTCGATATTCGTCACTTGGTACCAAAGCTCTGACTGGCGACATCTTGTGGAGCATTTCCTCTGATATGCAGAACGATGGAATGATTTCTGCTACATCCGCTTTGAGTTCACATAAAAGGAACCCTGATGTCGTGATCCTGAACCAAAGTATTAATCTACATATACGTTGTAGTTGA 5697 43.79 MDWWVFNHSTQEKGEIEGEEEEEEEEEEEGEVSTVDELRDLKGVLKREIDGPIRFPSLPRVASPDLASYFVSYQVSYGWKMVENLMEEMSPAVVVPFRLGNSVCDNPNMATPMDITRLKLMADTAGLLSDSVTKASDDLTEVGSDDCKSSNGEEEVGITTVSGMNDKCEGVPLSVVLSQNNSSWVPADESISHGSEEDDSLSLEGDHIYDSSCSHSVISENSSICGDDFLGSEVSSFEAFDSISNPKDISSVEIAAKANIEETNVESLDSQIASSSSAAASLEEDVGDGLGTEACNNTVLQLPLEKKASEPVGRSVFEVDCVPLWGFTSVCGRRPEMEDAVATVPRFSELPVQMLVGDRVLDGSNKAIAHQTVHFFGVYDGHGGSQVANFCRERMHLALSEEIELAKQEIAVGNVEDNCQELWRKAFTNCFLKVDAEIGGGPGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLVLASDGLWDVMTNEEVCDLARRRILLWHKKNGVSLPSERGVGIDPAAQAAAEYLSNRALQKGSKDNITARGHEATSLAEKFPRTASSFRPLLLRRRPFDGVVISQSMGIKRESKSSTSATSPCADFRAAYHNCFNRWYSEKFVKGHWDEKPCVSEWQKYRACLSEHLDDKKLKRFLVDGKQTVYFLFCRGEATQIIEFCGSTVLPGTLLFVESGNGDGLGESDGGRLLEEIEAISKALYLHKGHTNSIVYPSDGRSGSHLAESKSRFNEGYHKDGESLVDETERRSSSTWNWKKSLKALTHIGHRKFNCVFYLKVHSIEGVPPSFNGYSLSVHWKRKDEVLQTRPSKVFQGMAEFDETLIHKCVIYGGRSLANHSAKYDPKLYLIYVSMLGAPGLDFGKHWVDLTRILPLTLEELEGDKCSGNWSTSFRLAGNARGASLNVSFSFLVTKDDPMKLSGPENVVQLLKLLHHKSRICNYDAHPTSTNLNGPPSPDGNISHSLEYESITSTQIFDELNPKLELSKSINLLYGKMDEADQHKSEHSGSELDEQLELKSNEENKSDEVTGGGSYDSGEFSVIECGIELAGTEDSLDKVTVPTIEGSKVETVSLDEIIEDVKVAIEMKSSVMLKDAVCVVHVDDTAEDDLEYEENNLKLKVEEVASDELSSDSDLKWTSRSVETDSPLAVGKLVEHENDMDAKENCARTSLSLDDSYESVASDFLKMLGLEHGSARFSDPDILSPRERLLREFEEESLIFGNPLLDFTATEEWQDFGSVDMEFASENQDEDFDFSSIYVAEEVQEEGHHQSLRNRRNAKILEDLETEHLMREFGLNERDFEHSPHYSSSGFGSPIELPLEEEPSKLSSLGEGFGAFLKMYGGGFLQSMSPWLSQNTSIGQSLVIQCSEPVVLPAEMGHDIMEIAQNLALAGTENLSTLAKKLMPLDDITGKTLQQMVSECPPSKTLLEREPMIENNVLCSSVSFCERKDLEGLPSHQNDTSLQSLLNSEMDQDLVSPDDLAFLAIEKIETLLIEGLRIQSGLTNDETPAQITARPFHRVPACRQRRSNLGGSCSSEGLKELQFIDRPDTASDVVGLMDLSITLEHWLRLDAGNINDDDENGQHIMKTLVAHGANYADIIERLSKDINSGKSSKDLGLFGNKLVVALMVQLRDHLRDHEPVGGPMMCVMEAERLFINTACDTASETTNVNNGSEPLQAQEDSHETNKSQEKADEGHFVRAFKISAIHLLGVNSVPNKMQFWGTMTQQQSGSRWLLSSGMGRNFKLPLSKSKAIVRYSSLGTKALTGDILWSISSDMQNDGMISATSALSSHKRNPDVVILNQSINLHIRCS 1898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22189554 22204696 - CePI673135_08g010280.1 Cec08g1028 209670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1028 1898 Gene3D - 311 624 IPR036457 -
Cec08g1028 1898 MobiDBLite consensus disorder prediction 1089 1125 - -
Cec08g1028 1898 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 674 724 - -
Cec08g1028 1898 Pfam PMI1/PMIR1-2, C-terminal domain 1449 1599 IPR048972 -
Cec08g1028 1898 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 858 1006 IPR019448 -
Cec08g1028 1898 CDD PP2Cc 326 623 IPR001932 -
Cec08g1028 1898 MobiDBLite consensus disorder prediction 1 34 - -
Cec08g1028 1898 MobiDBLite consensus disorder prediction 1753 1779 - -
Cec08g1028 1898 Pfam Uncharacterised protein family (UPF0203) 672 731 IPR007918 -
Cec08g1028 1898 SMART PP2C_4 314 626 IPR001932 -
Cec08g1028 1898 MobiDBLite consensus disorder prediction 16 34 - -
Cec08g1028 1898 MobiDBLite consensus disorder prediction 1089 1114 - -
Cec08g1028 1898 ProSiteProfiles C2 NT-type domain profile. 853 1001 IPR019448 -
Cec08g1028 1898 ProSiteProfiles PPM-type phosphatase domain profile. 324 628 IPR001932 -
Cec08g1028 1898 ProSitePatterns PPM-type phosphatase domain signature. 375 383 IPR000222 GO:0043169(InterPro)
Cec08g1028 1898 FunFam Protein phosphatase 2C 16 312 624 - -
Cec08g1028 1898 Pfam Protein phosphatase 2C 348 621 IPR001932 -
Cec08g1028 1898 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 768 1888 IPR039614 -
Cec08g1028 1898 Coils Coil 9 29 - -
Cec08g1028 1898 SUPERFAMILY PP2C-like 321 623 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1644 Cec-Chr3:34619734 Cec08g1028 Cec-Chr8:22189554 1.50E-171 dispersed
Cec07g0079 Cec-Chr7:789800 Cec08g1028 Cec-Chr8:22189554 1.30E-17 dispersed
Cec07g1505 Cec-Chr7:30647043 Cec08g1028 Cec-Chr8:22189554 2.00E-144 dispersed
Cec08g1028 Cec-Chr8:22189554 Cec11g0692 Cec-Chr11:7654017 2.10E-47 dispersed
Cec08g1028 Cec-Chr8:22189554 Cec07g0291 Cec-Chr7:2857153 5.00E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1028 - - - 0.0