Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1030 ATGAGATCCGCAATCTCCAACAAGAAGAAGATGAAGCAAAACATTCAAAATCCACACCGCAGGCTATCGCCAATTACAGCGAAGAGTTCCCAAAATTTAGGAGAAAAGAAAGATGACGATGATCTTAATCCACACGGCAATGGCTACACACCCAATTCTTCATTTGGTCATGGCCTGCGGCTGCGGCATCAACATTCTGAACCTCTTTGCGAAATGTCTCCCTCCTCCTATCCACCCGAAGATGGGATTCCTTTGAACACCACGGCGGTGGCCATTGACAAGGATAAGAACAGCCATCACGCCGTCCGCTGGGCTATTGATCATCTGGTCATTAGCAATCCACTTATCATTCTCATCTACGTTAGGCATAAAGCTAATCAACATCAGGGAGCGAGCGATTCTGAAAATGGTGAAACTGATACCCAGCAGCTGTTTATTCCTTATCGTGGATATTGTGCTCGTAAAGGGGTTCAGCTGAAGGAGGTTGTTCTTGACGATACTGATATTCCCAAAGCGCTTGTTGACTACGTTCACAAAAATTGCATCAACAATTTTGTAGTTGGAGCTTCAACAAGGAGTGCTTTAGCAAGGAAATTTAAAGGTCCTGATGTTCCAACCAGCATAATAAAAACTGCCCCAGAATTTTGTTCTGTTTATGTAATATCAAAAGGGAAGATAATATCTGCCAGGGCAGCTCTTCGGCCAGTGGCTAATACTGCCACGCCACCAAGACAACCGTCGCCGCTTGGAGTTCAGCCAAATGTTCAACCAGATAGCAGCAACGAACCGGAAAATGGAGCCAAAGGGCAACCAGCAAAGGAAGGATGGAAAAGTGCAGGTACAGAGAGAATGCTCGCTGAAAGGAATAGTGGTGCAAAACCAGCAAAAGCGTTGACCCGTGAGAGGCCAAAAACTTCTCCGACTAATATATCAATGGAAAATATAGAGGTTCCAAATCGAGGGTCTAGGTCTTCATTTAGTCGTGATTCGATATCTGATGACAATATGCTGACTGCACAGATGGCCTTTGGTTCAATGGACGTGACTGCTCAAAATTTAGATTTCAGTGGCTCAAATTTGTCAGTGGACTCTGCTTCCACACAATCTACTCGGGAACTAGAGGCTGAGATGAAAAGATTGAAGCTGGAATTAAAGCAAACCATGGATATGTATAGCTCAGCCTGCAAAGAGGCAATCTCAGCCAAGAACAAGGCGAGAGAACTTAGTCAGTGGAAGCAAGATGAGGCACGTAAGTTCGAGGAAGTCAGGCTAGCTGAAGAGGCTGCTCTCGCTATTGCTGAGATGGAGAAAGCCAAGTGCAAAGCTGCCATTGAAGCAGCAGAGGCAGCACAAAAGCTAGCCGAAAGAGAAGCCCAGAGAAGAAAACAGGCTGAAATGAAAGCCAGACGAGAGGCAGAAGAGAAAAAACGAGCATTGAATGCTCTAGCTCAGAATGACGTCCGATATAGAAAATACACTATAGAGGAGATTGAGGAATCTACTGAAAAGTTCTCTGAAAAATTGAAGATTGGAGAAGGTGGATACGGTCCTGTTTATGGTGGCAAACTTGATCATACAGCTGTTGCGATTAAAGTTTTAAGACCTGACGCTGCTCAAGGACGGAAGCAATTCCAACAAGAGGTGGAGGTCCTCTGTTGTATTAGACATCCAAACATGGTCCTTCTTCTTGGGGCATGCCCCGAGTATGGTTGCTTGGTATATGAGTACATGCATAATGGGAGCTTAGAAGACAGACTTTTCCGGAGAGGGAATACTCCTCCATTATCTTGGAGACGACGATTCAAAATAGCTGCTGAAATTGCAACCGCTCTCCTTTTTCTTCACCAAGCAAAGCCAGAACCGCTCGTTCATAGGGACCTTAAACCAGCTAACATTCTCCTGGACCGCAATTATGTGAGCAAAATCAGTGATGTTGGCCTGGCCCGATTAGTCCCACCTTCTGTAGCTGATCAAGTCACACAATATCACCTGACTTCAGCAGCTGGCACATTTTGTTACATTGATCCCGAGTACCAACAAACAGGGCAGTTAACGACAAAATCAGATATTTACTCGTTTGGAATAATGTTACTTCAAATTATTACTGCCAAGCCTCCAATGGGTTTGGCTCACCATGTGCAAAGGGCTATTGAGAAAGAGAGGTTTGATGAGATGCTGGATCCTACAATTTCAGATTGTCCACTGGAGGAGGCCATAAATTTTGCAAACTTGGCATTGAAGTGCGCTGAACTGAGGAAGAGAGACAGGCCAGATCTTGGAACAGTTATAGTTCCAGAGCTCAACAGGTTAAGAGATATTGGGAGGAGCTCTGACAAACGTGAAAGCCGAAGTAACTTCCCACGCTCTGCTGCATCAAGTTCCAGTTCAAGGCCGCAGTCATCAAATGAGGATTCCAGAATTCTGATTGATCTTTGTAACGAGGGAATTTTCAGGAAGGAATTGAGGAGCCCAGATTGGGAAGAAAAGTATAAAGCAAGCATGGACAAAAGGATTAAAGTGCAAGAATTATACAAGGAGCTGGGAATCCACATAAAGGTTGATTATGTTTTCAGAAAGGTAGTACAGATGGTTTCTTCTACTTGA 2604 44.51 MRSAISNKKKMKQNIQNPHRRLSPITAKSSQNLGEKKDDDDLNPHGNGYTPNSSFGHGLRLRHQHSEPLCEMSPSSYPPEDGIPLNTTAVAIDKDKNSHHAVRWAIDHLVISNPLIILIYVRHKANQHQGASDSENGETDTQQLFIPYRGYCARKGVQLKEVVLDDTDIPKALVDYVHKNCINNFVVGASTRSALARKFKGPDVPTSIIKTAPEFCSVYVISKGKIISARAALRPVANTATPPRQPSPLGVQPNVQPDSSNEPENGAKGQPAKEGWKSAGTERMLAERNSGAKPAKALTRERPKTSPTNISMENIEVPNRGSRSSFSRDSISDDNMLTAQMAFGSMDVTAQNLDFSGSNLSVDSASTQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKQDEARKFEEVRLAEEAALAIAEMEKAKCKAAIEAAEAAQKLAEREAQRRKQAEMKARREAEEKKRALNALAQNDVRYRKYTIEEIEESTEKFSEKLKIGEGGYGPVYGGKLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLFRRGNTPPLSWRRRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADQVTQYHLTSAAGTFCYIDPEYQQTGQLTTKSDIYSFGIMLLQIITAKPPMGLAHHVQRAIEKERFDEMLDPTISDCPLEEAINFANLALKCAELRKRDRPDLGTVIVPELNRLRDIGRSSDKRESRSNFPRSAASSSSSRPQSSNEDSRILIDLCNEGIFRKELRSPDWEEKYKASMDKRIKVQELYKELGIHIKVDYVFRKVVQMVSST 867
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22233607 22239139 + CePI673135_08g010300.1 Cec08g1030 209672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1030 867 MobiDBLite consensus disorder prediction 786 804 - -
Cec08g1030 867 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 88 220 - -
Cec08g1030 867 CDD STKc_IRAK 510 770 - -
Cec08g1030 867 Coils Coil 370 390 - -
Cec08g1030 867 MobiDBLite consensus disorder prediction 1 59 - -
Cec08g1030 867 MobiDBLite consensus disorder prediction 1 31 - -
Cec08g1030 867 ProSiteProfiles Protein kinase domain profile. 504 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1030 867 Pfam Protein tyrosine and serine/threonine kinase 508 762 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g1030 867 PANTHER OS02G0152300 PROTEIN 89 790 IPR051348 -
Cec08g1030 867 MobiDBLite consensus disorder prediction 774 804 - -
Cec08g1030 867 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 476 576 - -
Cec08g1030 867 SUPERFAMILY Protein kinase-like (PK-like) 487 762 IPR011009 -
Cec08g1030 867 Coils Coil 430 485 - -
Cec08g1030 867 Gene3D Transferase(Phosphotransferase) domain 1 577 791 - -
Cec08g1030 867 MobiDBLite consensus disorder prediction 238 313 - -
Cec08g1030 867 Gene3D HUPs 85 223 IPR014729 -
Cec08g1030 867 FunFam U-box domain-containing protein 51 577 777 - -
Cec08g1030 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g1030 867 SMART serkin_6 504 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1030 867 MobiDBLite consensus disorder prediction 251 266 - -
Cec08g1030 867 Pfam Universal stress protein family 90 219 IPR006016 -
Cec08g1030 867 Gene3D Phosphorylase Kinase; domain 1 473 576 - -
Cec08g1030 867 CDD STK_N 87 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1030 Cec-Chr8:22233607 Cec09g0078 Cec-Chr9:638457 4.20E-184 dispersed
Cec05g2872 Cec-Chr5:38896352 Cec08g1030 Cec-Chr8:22233607 9.10E-207 transposed
Cec08g1293 Cec-Chr8:24916312 Cec08g1030 Cec-Chr8:22233607 1.30E-200 transposed
Cec11g1173 Cec-Chr11:24038135 Cec08g1030 Cec-Chr8:22233607 2.60E-183 transposed
Cec11g1957 Cec-Chr11:33629984 Cec08g1030 Cec-Chr8:22233607 1.30E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72202 PF07714 PK_Tyr_Ser-Thr 2.60E-41 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1030 - - - 0.0