Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1038 ATGGAGGAAGAGGAAACCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGGCGAGTGAAGAAGATAATGAAGCTCGACAAGGATATTGGCAAAGTGAATTCAGAAGCCCTGTTTCTAGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAAACCGTGAAGCTTGAACACATCCGAATCGCCGCCAAAAGGCATCGATCGATTAGTGATTTTCTACTCGATTCGCTTCCTCTTCCTTCTCAGCGGTCGGATGCGCCGGCAAAGGACGAGAATCGCACTCGCACTGTCGTTGATAAAGTGGCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTAGCCGGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCATAG 423 51.77 MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTRRIDDFFSRPAKTTSAETNES 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22277827 22278249 + CePI673135_08g010380.1 Cec08g1038 209680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1038 140 MobiDBLite consensus disorder prediction 90 140 - -
Cec08g1038 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 75 IPR003958 -
Cec08g1038 140 SUPERFAMILY Histone-fold 12 91 IPR009072 GO:0046982(InterPro)
Cec08g1038 140 MobiDBLite consensus disorder prediction 99 127 - -
Cec08g1038 140 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 9 106 IPR050568 GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)
Cec08g1038 140 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982(InterPro)
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30063 PF00808 CBFD_NFYB_HMF 1.40E-19 CL0012 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1038 - - - 0.0