Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1048 ATGGACGACGGAGCAGCTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTGTACCACCACCGCAGCACGACCCGGCGGCGCACCAGCAGCATCAGCATCAGCCGCCGTCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTTATTCAGTATAATATCTTTGGTAACATCTTCGAAGTTACGGCCAAGTACAAGCCTCCCATCATGCCTATTGGCAAAGGCGCATACGGCATCGTCTGTTCTGCTCTCAACTCCGAGACCAACGAGCATGTGGCGATCAAGAAGATTGCTAATGCGTTTGATAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTTCTTCGGCATATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATACCTCCACCTCTTAGGGAAACATTCAATGATGTTTATATAGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCGGAGGAGCATTGTCAGTATTTCCTGTACCAGATTCTCCGTGGATTGAAGTACATACATTCAGCTAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTGCTATTAAATGCCAACTGTGACCTGAAAATATGCGATTTCGGACTTGCTCGTGTTACTTCTGAAACTGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGTGCACCAGAGCTCTTACTTAATTCATCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCATTGTTTCCTGGTAGAGATCATGTGCATCAGTTGCGCTTGCTTTTGGAGCTGATTGGCACCCCATCAGAGGCTGATCTTGGTTTTTTGAACGAGAATGCTAAAAGATACATACGGCAACTACCTCATTACCATCGTCAGTCATTCACTGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGACAGAGAATTACCGTTGAAGATGCTCTTGCTCATCCTTATTTGACTTCATTGCATGACATTAGTGATGAGCCTGTCTGCATGACACCCTTCAGCTTTGATTTCGAGCAGCATGCGCTTACCGAGGAACAGATGAAAGAGCTGATCTATCTAGAGGCGCTTGCATTTAACCCCGAGTATCATCACCAATAA 1218 45.24 MDDGAASQPDDTVMSEAASVPPPQHDPAAHQQHQHQPPSMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPHYHRQSFTEKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYLEALAFNPEYHHQ 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22357171 22364457 + CePI673135_08g010480.1 Cec08g1048 209690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1048 405 Pfam Protein kinase domain 77 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1048 405 MobiDBLite consensus disorder prediction 1 44 - -
Cec08g1048 405 SMART serkin_6 72 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1048 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g1048 405 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 65 390 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec08g1048 405 Gene3D Transferase(Phosphotransferase) domain 1 156 384 - -
Cec08g1048 405 FunFam Mitogen-activated protein kinase 156 384 - -
Cec08g1048 405 ProSitePatterns MAP kinase signature. 107 210 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1048 405 Gene3D Phosphorylase Kinase; domain 1 55 393 - -
Cec08g1048 405 ProSitePatterns Protein kinases ATP-binding region signature. 78 102 IPR017441 GO:0005524(InterPro)
Cec08g1048 405 CDD STKc_TEY_MAPK 65 400 - -
Cec08g1048 405 SUPERFAMILY Protein kinase-like (PK-like) 77 365 IPR011009 -
Cec08g1048 405 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1048 405 FunFam Mitogen-activated protein kinase 57 166 - -
Cec08g1048 405 MobiDBLite consensus disorder prediction 29 43 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0201 Cec-Chr3:2093094 Cec08g1048 Cec-Chr8:22357171 5.90E-172 dispersed
Cec06g0355 Cec-Chr6:4074134 Cec08g1048 Cec-Chr8:22357171 1.50E-159 dispersed
Cec08g1048 Cec-Chr8:22357171 Cec08g1526 Cec-Chr8:26958400 5.20E-113 dispersed
Cec01g1747 Cec-Chr1:32065056 Cec08g1048 Cec-Chr8:22357171 8.80E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72203 PF00069 Pkinase 3.40E-73 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1048 K14512 - csv:101204301 801.586