Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1048 | ATGGACGACGGAGCAGCTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTGTACCACCACCGCAGCACGACCCGGCGGCGCACCAGCAGCATCAGCATCAGCCGCCGTCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTTATTCAGTATAATATCTTTGGTAACATCTTCGAAGTTACGGCCAAGTACAAGCCTCCCATCATGCCTATTGGCAAAGGCGCATACGGCATCGTCTGTTCTGCTCTCAACTCCGAGACCAACGAGCATGTGGCGATCAAGAAGATTGCTAATGCGTTTGATAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTTCTTCGGCATATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATACCTCCACCTCTTAGGGAAACATTCAATGATGTTTATATAGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCGGAGGAGCATTGTCAGTATTTCCTGTACCAGATTCTCCGTGGATTGAAGTACATACATTCAGCTAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTGCTATTAAATGCCAACTGTGACCTGAAAATATGCGATTTCGGACTTGCTCGTGTTACTTCTGAAACTGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGTGCACCAGAGCTCTTACTTAATTCATCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCATTGTTTCCTGGTAGAGATCATGTGCATCAGTTGCGCTTGCTTTTGGAGCTGATTGGCACCCCATCAGAGGCTGATCTTGGTTTTTTGAACGAGAATGCTAAAAGATACATACGGCAACTACCTCATTACCATCGTCAGTCATTCACTGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGACAGAGAATTACCGTTGAAGATGCTCTTGCTCATCCTTATTTGACTTCATTGCATGACATTAGTGATGAGCCTGTCTGCATGACACCCTTCAGCTTTGATTTCGAGCAGCATGCGCTTACCGAGGAACAGATGAAAGAGCTGATCTATCTAGAGGCGCTTGCATTTAACCCCGAGTATCATCACCAATAA | 1218 | 45.24 | MDDGAASQPDDTVMSEAASVPPPQHDPAAHQQHQHQPPSMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPHYHRQSFTEKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYLEALAFNPEYHHQ | 405 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 22357171 | 22364457 | + | CePI673135_08g010480.1 | Cec08g1048 | 209690 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1048 | 405 | Pfam | Protein kinase domain | 77 | 357 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g1048 | 405 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Cec08g1048 | 405 | SMART | serkin_6 | 72 | 357 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g1048 | 405 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 194 | 206 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec08g1048 | 405 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 65 | 390 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Cec08g1048 | 405 | Gene3D | Transferase(Phosphotransferase) domain 1 | 156 | 384 | - | - | |
Cec08g1048 | 405 | FunFam | Mitogen-activated protein kinase | 156 | 384 | - | - | |
Cec08g1048 | 405 | ProSitePatterns | MAP kinase signature. | 107 | 210 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g1048 | 405 | Gene3D | Phosphorylase Kinase; domain 1 | 55 | 393 | - | - | |
Cec08g1048 | 405 | ProSitePatterns | Protein kinases ATP-binding region signature. | 78 | 102 | IPR017441 | GO:0005524(InterPro) | |
Cec08g1048 | 405 | CDD | STKc_TEY_MAPK | 65 | 400 | - | - | |
Cec08g1048 | 405 | SUPERFAMILY | Protein kinase-like (PK-like) | 77 | 365 | IPR011009 | - | |
Cec08g1048 | 405 | ProSiteProfiles | Protein kinase domain profile. | 72 | 357 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g1048 | 405 | FunFam | Mitogen-activated protein kinase | 57 | 166 | - | - | |
Cec08g1048 | 405 | MobiDBLite | consensus disorder prediction | 29 | 43 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0201 | Cec-Chr3:2093094 | Cec08g1048 | Cec-Chr8:22357171 | 5.90E-172 | dispersed | |
Cec06g0355 | Cec-Chr6:4074134 | Cec08g1048 | Cec-Chr8:22357171 | 1.50E-159 | dispersed | |
Cec08g1048 | Cec-Chr8:22357171 | Cec08g1526 | Cec-Chr8:26958400 | 5.20E-113 | dispersed | |
Cec01g1747 | Cec-Chr1:32065056 | Cec08g1048 | Cec-Chr8:22357171 | 8.80E-44 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72203 | PF00069 | Pkinase | 3.40E-73 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1048 | K14512 | - | csv:101204301 | 801.586 |