Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1058 | ATGGCTGATTCACCTCCTCCCCCTCCCTTCTCCACCGCCGATTCCTCCACTAATTCAACCGACGCTCTTTTCTTCTTCCCTCCCGATTCCGATTCCACCATCCTTACCGAATTCGGATGGAATTTCCACTCTCTCCAACCTCAACAACCTTCTCGATTCCTCCAATCTCACCGGATCGACGCCGATTTGCCTCCAACTTCCACTCCGGTAATCGATGACGCTGCCGGATTACAGAGCCCTGACGCTCCTCTTCCACTCGCCTCTAATCCTTCTTTGTCTTCTAGCTCTAGCGGAGAGCCGACGGAGAAACAGCCTGAGATTATTCCGCGGAAGGTCAAAAAGAAGGGGCAGAAGCGAATTCGGCAGCCACGATTTGCATTCATGACCAAAAGCGAAGTCGATCATCTTGAAGATGGCTACCGGTGGAGGAAATATGGACAAAAGGCTGTCAAGAACAGTCCATTCCCTAGGAGTTACTACAGGTGCACAAACAGCAAATGCACAGTGAAGAAAAGAGTAGAACGGTCTTGTGAAGATCCAAGCATTGTGATAACAACATATGAAGGACAACACTGTCATCACACCGTTGGATTCCCTCGAGGTGGATTAAACATAGCTCATGAAGCTGCTTTTGGGTCTCAATTTTCACCTCAAATCCCACAGTTTTTTTACCCTGATCATCAAACTCACTCACCACCCACAACTAACATTAACCACCCTCCCCCCACTCCCAATGACCAGTCACACGATTTGGCTCCATCATCATCCTCCAATGCACTATCCTTAGAACAACAAGATCCAACAAACTCAAACCTCCAAGTTCCTTCCAACGAAGGCTTGCTCGGCGCTATCGTCCCACCCGCCATGATGCGTAGAACATAA | 882 | 48.87 | MADSPPPPPFSTADSSTNSTDALFFFPPDSDSTILTEFGWNFHSLQPQQPSRFLQSHRIDADLPPTSTPVIDDAAGLQSPDAPLPLASNPSLSSSSSGEPTEKQPEIIPRKVKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSCEDPSIVITTYEGQHCHHTVGFPRGGLNIAHEAAFGSQFSPQIPQFFYPDHQTHSPPTTNINHPPPTPNDQSHDLAPSSSSNALSLEQQDPTNSNLQVPSNEGLLGAIVPPAMMRRT | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 22466291 | 22471056 | - | CePI673135_08g010580.1 | Cec08g1058 | 209700 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1058 | 293 | Gene3D | WRKY domain | 123 | 189 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec08g1058 | 293 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cec08g1058 | 293 | MobiDBLite | consensus disorder prediction | 84 | 102 | - | - | |
Cec08g1058 | 293 | MobiDBLite | consensus disorder prediction | 51 | 120 | - | - | |
Cec08g1058 | 293 | FunFam | WRKY transcription factor 57 | 122 | 196 | - | - | |
Cec08g1058 | 293 | MobiDBLite | consensus disorder prediction | 221 | 279 | - | - | |
Cec08g1058 | 293 | SUPERFAMILY | WRKY DNA-binding domain | 128 | 194 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec08g1058 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 89 | 231 | IPR044810 | GO:0003700(InterPro) | |
Cec08g1058 | 293 | SMART | WRKY_cls | 136 | 195 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec08g1058 | 293 | ProSiteProfiles | WRKY domain profile. | 131 | 196 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec08g1058 | 293 | MobiDBLite | consensus disorder prediction | 241 | 277 | - | - | |
Cec08g1058 | 293 | Pfam | WRKY DNA -binding domain | 137 | 193 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0945 | Cec-Chr4:29111506 | Cec08g1058 | Cec-Chr8:22466291 | 2.50E-20 | dispersed | |
Cec08g1027 | Cec-Chr8:22188316 | Cec08g1058 | Cec-Chr8:22466291 | 4.20E-23 | dispersed | |
Cec08g1058 | Cec-Chr8:22466291 | Cec09g2349 | Cec-Chr9:40316282 | 8.30E-36 | dispersed | |
Cec08g1058 | Cec-Chr8:22466291 | Cec06g0447 | Cec-Chr6:5039065 | 1.60E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30064 | PF03106 | WRKY | 8.90E-25 | CL0274 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1058 | - | - | - | 0.0 |