Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1058 ATGGCTGATTCACCTCCTCCCCCTCCCTTCTCCACCGCCGATTCCTCCACTAATTCAACCGACGCTCTTTTCTTCTTCCCTCCCGATTCCGATTCCACCATCCTTACCGAATTCGGATGGAATTTCCACTCTCTCCAACCTCAACAACCTTCTCGATTCCTCCAATCTCACCGGATCGACGCCGATTTGCCTCCAACTTCCACTCCGGTAATCGATGACGCTGCCGGATTACAGAGCCCTGACGCTCCTCTTCCACTCGCCTCTAATCCTTCTTTGTCTTCTAGCTCTAGCGGAGAGCCGACGGAGAAACAGCCTGAGATTATTCCGCGGAAGGTCAAAAAGAAGGGGCAGAAGCGAATTCGGCAGCCACGATTTGCATTCATGACCAAAAGCGAAGTCGATCATCTTGAAGATGGCTACCGGTGGAGGAAATATGGACAAAAGGCTGTCAAGAACAGTCCATTCCCTAGGAGTTACTACAGGTGCACAAACAGCAAATGCACAGTGAAGAAAAGAGTAGAACGGTCTTGTGAAGATCCAAGCATTGTGATAACAACATATGAAGGACAACACTGTCATCACACCGTTGGATTCCCTCGAGGTGGATTAAACATAGCTCATGAAGCTGCTTTTGGGTCTCAATTTTCACCTCAAATCCCACAGTTTTTTTACCCTGATCATCAAACTCACTCACCACCCACAACTAACATTAACCACCCTCCCCCCACTCCCAATGACCAGTCACACGATTTGGCTCCATCATCATCCTCCAATGCACTATCCTTAGAACAACAAGATCCAACAAACTCAAACCTCCAAGTTCCTTCCAACGAAGGCTTGCTCGGCGCTATCGTCCCACCCGCCATGATGCGTAGAACATAA 882 48.87 MADSPPPPPFSTADSSTNSTDALFFFPPDSDSTILTEFGWNFHSLQPQQPSRFLQSHRIDADLPPTSTPVIDDAAGLQSPDAPLPLASNPSLSSSSSGEPTEKQPEIIPRKVKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSCEDPSIVITTYEGQHCHHTVGFPRGGLNIAHEAAFGSQFSPQIPQFFYPDHQTHSPPTTNINHPPPTPNDQSHDLAPSSSSNALSLEQQDPTNSNLQVPSNEGLLGAIVPPAMMRRT 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22466291 22471056 - CePI673135_08g010580.1 Cec08g1058 209700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1058 293 Gene3D WRKY domain 123 189 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec08g1058 293 MobiDBLite consensus disorder prediction 1 26 - -
Cec08g1058 293 MobiDBLite consensus disorder prediction 84 102 - -
Cec08g1058 293 MobiDBLite consensus disorder prediction 51 120 - -
Cec08g1058 293 FunFam WRKY transcription factor 57 122 196 - -
Cec08g1058 293 MobiDBLite consensus disorder prediction 221 279 - -
Cec08g1058 293 SUPERFAMILY WRKY DNA-binding domain 128 194 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec08g1058 293 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 231 IPR044810 GO:0003700(InterPro)
Cec08g1058 293 SMART WRKY_cls 136 195 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec08g1058 293 ProSiteProfiles WRKY domain profile. 131 196 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec08g1058 293 MobiDBLite consensus disorder prediction 241 277 - -
Cec08g1058 293 Pfam WRKY DNA -binding domain 137 193 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0945 Cec-Chr4:29111506 Cec08g1058 Cec-Chr8:22466291 2.50E-20 dispersed
Cec08g1027 Cec-Chr8:22188316 Cec08g1058 Cec-Chr8:22466291 4.20E-23 dispersed
Cec08g1058 Cec-Chr8:22466291 Cec09g2349 Cec-Chr9:40316282 8.30E-36 dispersed
Cec08g1058 Cec-Chr8:22466291 Cec06g0447 Cec-Chr6:5039065 1.60E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30064 PF03106 WRKY 8.90E-25 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1058 - - - 0.0