Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1072 ATGGATGTCTCAAGAGGGGTAAAGAAGAGAGGCCATGGAAATCGTTCTTGGATAAAGATTGATCAGGAAGGGAACTCGGAGGTTTTGGAACTTGAGAAGGCTACGATAATGAGGCGTTGTTCTTTACCTTCTAGAGATATGCGACTTTTGGATCCTCTCTTCCTTTGTCCATCCACAATTCTTGGAAGGGAGAAGGCAATTGTTGTCAGTCTTGAGCAAATTCGGTGTATAATCACATCTGATGAGGTTATTTTAATGAACTCCTTAGATGGTTGTGCTACACAGTACAAGTCAGAACTATGCAAGCGTCTCAAAGCAAATAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGGGCACTGGAGCTGGCGCTGGAACTTACTTGCTCACTTCTTGACACTCAGGTGAAGGGGATGGAAATGGAGATATACCCTCTACTGGATGATTTAGCATCTTCAATAAACACCCTTAATCTCGAAAGAGTTCGAAGATTTAAAGGCAACCTTCTGACCTTGACTCAACAAGTGCAAAAGGTGCGGGATGAAATTGAACATCTGATGGATGATGATGGGGATATGGCTGAGATGTATCTGACACAGAAAAAACAAAAATTGGAGGCGAACATCCGAAGTAACTTGTATTTGGAAGCTAACTTCTTTGGGAAACAGCCACCAAAATCAGCTCCTGTTTCGCCAGTGGGTTCTGCCAATGGAACTTATAAATTACAAAGGGCTTTTAGCAGTATTGTGAACTCAAGCAGCATGATGAGTTCATCGACCAGTGGAGATAACATCGAACAATTGGAGATGCTGCTCGAAGCATACTTTGTGGTCATTGACGACATGCTCAGTAAATTGTTATCGCTCAAAGAGTCTATAGATGACACAGAAGATCTGATCAACATTAAACTGGGCAACGTTCAGAACCAGCTGATACAATTTCAGTTGCTTTTTACTGCTGCTACATTCTTGGCTACAATGTTTGCGGCTTTAACAGCGGTTTTTGGCATGAATTTTGCCGATGATGTCTTCGAGCATCCGACTTCTTTCCAGTTGATAGTTTACTTGACCTTGATTGCCTGTGGCCTTGTGTATTTCGGTTTTCTATTCTATTTTAGGTACAAGAAAATATTCCCACTGTAA 1143 41.38 MDVSRGVKKRGHGNRSWIKIDQEGNSEVLELEKATIMRRCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCIITSDEVILMNSLDGCATQYKSELCKRLKANKDQSDDLPFEFRALELALELTCSLLDTQVKGMEMEIYPLLDDLASSINTLNLERVRRFKGNLLTLTQQVQKVRDEIEHLMDDDGDMAEMYLTQKKQKLEANIRSNLYLEANFFGKQPPKSAPVSPVGSANGTYKLQRAFSSIVNSSSMMSSSTSGDNIEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQLLFTAATFLATMFAALTAVFGMNFADDVFEHPTSFQLIVYLTLIACGLVYFGFLFYFRYKKIFPL 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22578531 22582178 - CePI673135_08g010720.1 Cec08g1072 209714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1072 380 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 377 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cec08g1072 380 Pfam Magnesium transporter MRS2-like 20 206 - -
Cec08g1072 380 Coils Coil 169 189 - -
Cec08g1072 380 Gene3D Magnesium transport protein CorA, transmembrane region 91 311 - -
Cec08g1072 380 CDD Mrs2_Mfm1p-like 17 377 IPR039204 -
Cec08g1072 380 FunFam Magnesium transporter MRS2-1 5 88 - -
Cec08g1072 380 Gene3D - 4 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1072 Cec-Chr8:22578531 Cec10g1297 Cec-Chr10:27136508 1.20E-106 dispersed
Cec08g1072 Cec-Chr8:22578531 Cec06g0671 Cec-Chr6:7578908 1.10E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1072 K16075 - csv:101220835 656.366