Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1078 ATGTCATCACAAACCTTCAACTCTCTTCTTCTTCATTTCCCCATTTCCATTTCCCAAAGCTTCGAAGCTTTTCTTCTTACCCTTTTTCTCCTCTCCATTTTCGCCTTCTTCCTCCATCCCGGTGGCTTCGCTTGGGCCGTTTCCAAGTTCAAAACCACCGCCTCCACCGCCATCCCTGGCCCTTCCGGCCTCCCATTCATCGGGCTTCTCCATGTCTTCACTCTTTCAACTCCTCACAAAGCCCTCTCTGCCCTTGCTAATCGATTCAAAGCATACCCGTTAATGGCTTTCTCTGTTGGGTTAACTAGATTTGTGATTTCTAGTAATCCTGATGTTGCTAAAGAGATTCTTAACAGCCATGCCTTTGCTGATAGACCCGTGAAAGAGTCTGCTTATGAACTGCTTTTCAACAGAGCAATGGGGTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGAAGGATTTCAGCTACTTATATGTTTAGTCCTAAGAGAATAGCTGGGTTTGAAGGGTTTAGGAAAGAAGTTGGGGTTAAAATGGTTAGGGAAATTGAGAAATCTATGGTTTTAAAAGGGGATGTGAGGGTTAAAGAGATTCTTCATTTTGGGTCTTTGAATAACGTTATGATGACTGTTTTTGGGAAATGTTATGAGTTTTGTAATGGGGATAGAGATGGGGTTGAGCTTGAAGAGTTGGTTAAAGAAGGGTATGATTTGCTTGGGATTTTCAATTGGAGTGACCATTTTCCTTTATTGGGTTTCTTGGATTTACAAGGTGTGAGGAAAAGATGTAGGTGTTTGGCTTCTAAAGTGAATGTATTTGTGGGAAAAATCATCGAGGAACATAGAATGAAAAGGGAAATCAAGGGATATCATCAACAAGAACATAACAAAGACTTTGTTGATGTTCTGCTTGATTTGGAGAAAGATGATAAACTCTCAGATTCTGACATGATTGCTGTTCTTTGGGAAATGATATTTAGAGGAACTGACACAGTAGCCATACTTCTGGAATGGATTTTAGCAAGAATGGTGATACACCAAGATATCCAAACCAAAGCCCAAAATGAAATTGATTCAGTAATAGGCAAGAAATGGAGAGCCATTTCAGATACTGATATCCAAAACCTTCCATATCTTCAAGCCATTGTGAAGGAATGTTTAAGAATGCACCCACCAGGACCACTTCTGTCATGGGCAAGGCTAGCTGTGGCGGATGTGCACGTCGATGGGAGAGTGATACCGGCGGGGACGACGGCGATGGTGAACATGTGGGCAATAACTCATTATGAAAAAGTATGGAGAGATGCAGAGAAGTTTGATCCAAATAGATTCATAGAAGAGGAAATTAGTGTAATGGGAAGTGATTTGAGATTGGCTCCATTTGGGGCAGGGAGAAGAGTTTGCCCTGGAAAAGCAATGGGATTGGCTACTGTCCATCTCTGGTTGGCTCAGTTGCTTCAAGCTTACAAATGGATGCCTTGTTCTGAAGAAGCCATTAATGGTGTTGACCTGTCAGAATGCCTTAAACTCTCTCTGGAAATGAAAACTCCATTGGTTTGCAGAGCTGTTCCCAGGGCTGGTTGGGGACAGGACTGA 1599 42.4 MSSQTFNSLLLHFPISISQSFEAFLLTLFLLSIFAFFLHPGGFAWAVSKFKTTASTAIPGPSGLPFIGLLHVFTLSTPHKALSALANRFKAYPLMAFSVGLTRFVISSNPDVAKEILNSHAFADRPVKESAYELLFNRAMGFAPYGEYWRNLRRISATYMFSPKRIAGFEGFRKEVGVKMVREIEKSMVLKGDVRVKEILHFGSLNNVMMTVFGKCYEFCNGDRDGVELEELVKEGYDLLGIFNWSDHFPLLGFLDLQGVRKRCRCLASKVNVFVGKIIEEHRMKREIKGYHQQEHNKDFVDVLLDLEKDDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVIHQDIQTKAQNEIDSVIGKKWRAISDTDIQNLPYLQAIVKECLRMHPPGPLLSWARLAVADVHVDGRVIPAGTTAMVNMWAITHYEKVWRDAEKFDPNRFIEEEISVMGSDLRLAPFGAGRRVCPGKAMGLATVHLWLAQLLQAYKWMPCSEEAINGVDLSECLKLSLEMKTPLVCRAVPRAGWGQD 532
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 22611547 22613535 - CePI673135_08g010780.1 Cec08g1078 209720
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1078 532 SUPERFAMILY Cytochrome P450 58 526 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 Pfam Cytochrome P450 59 507 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PANTHER CYTOCHROME P450 78A7-RELATED 22 523 IPR051996 -
Cec08g1078 532 CDD CYP78 90 519 - -
Cec08g1078 532 Gene3D Cytochrome P450 46 522 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cec08g1078 532 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 FunFam Cytochrome P450 78A5 50 526 - -
Cec08g1078 532 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec08g1078 532 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0098 Cec-Chr2:999414 Cec08g1078 Cec-Chr8:22611547 7.50E-136 dispersed
Cec08g1078 Cec-Chr8:22611547 Cec03g0315 Cec-Chr3:3589367 5.00E-71 dispersed
Cec06g0288 Cec-Chr6:3306613 Cec08g1078 Cec-Chr8:22611547 9.20E-134 transposed
Cec11g1421 Cec-Chr11:28400575 Cec08g1078 Cec-Chr8:22611547 5.40E-160 transposed
Cec01g1710 Cec-Chr1:31744773 Cec08g1078 Cec-Chr8:22611547 2.10E-194 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1078 K20619 - csv:101221468 974.156