Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1098 | ATGTCCTCCGCCCATTCCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCCCCCCCACCGCCGCCGCCCCCGGCCGCGTTGGCCTCGGCTACGGCATTGCCATCGCCGTCAGCATCCTCGTCTTCATCTCCACCATCATGCTCATCTCCTACGCTTGCATTCGCGTCAAATCCGCCCGCCCTCGCCCTCGCCCTAGACCTGCCGCCTCTCTCCCTTCCCCCGCCGCCGACAATGTGGTGGTTCTCATGGTCGGATTAGACGGCTCCATCATCGAATCCTACCCTAAGTTAGTCCTTGGAGAGAGCCGCCGTCTTCCCGCCCCTAATCACGGCCCTTGCTCCATTTGCCTCTCCGATTACAAGCCTTACGATTCTCTCCGCTGTATTCCTGATTGTCGCCATTGTTTTCACTCCGACTGCGTCGATGAATGGCTTCGTATGAGCGCTACTTGTCCTTTGTGTCGAAATTCCCCTGCTCCAACCCCTGTTGCTACTCCTCTCTCTGAGTTTGTGCCTTTGGCTTCCAATGCCAGGTGA | 537 | 58.85 | MSSAHSPSSSSSSSSSFPPTAAAPGRVGLGYGIAIAVSILVFISTIMLISYACIRVKSARPRPRPRPAASLPSPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYKPYDSLRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASNAR | 178 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 22811002 | 22811538 | + | CePI673135_08g010980.1 | Cec08g1098 | 209740 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1098 | 178 | PANTHER | RING-H2 FINGER PROTEIN ATL67 | 15 | 177 | IPR044289 | GO:0016567(InterPro)|GO:0016740(InterPro) | |
Cec08g1098 | 178 | ProSiteProfiles | Zinc finger RING-type profile. | 113 | 155 | IPR001841 | - | |
Cec08g1098 | 178 | SUPERFAMILY | RING/U-box | 112 | 160 | - | - | |
Cec08g1098 | 178 | CDD | RING-H2_EL5-like | 113 | 155 | - | - | |
Cec08g1098 | 178 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 80 | 160 | IPR013083 | - | |
Cec08g1098 | 178 | Pfam | Ring finger domain | 113 | 155 | IPR001841 | - | |
Cec08g1098 | 178 | SMART | ring_2 | 113 | 154 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1194 | Cec-Chr4:31512533 | Cec08g1098 | Cec-Chr8:22811002 | 6.60E-25 | dispersed | |
Cec05g1056 | Cec-Chr5:9261355 | Cec08g1098 | Cec-Chr8:22811002 | 2.40E-23 | dispersed | |
Cec07g1624 | Cec-Chr7:31773142 | Cec08g1098 | Cec-Chr8:22811002 | 4.40E-24 | dispersed | |
Cec08g1098 | Cec-Chr8:22811002 | Cec10g1831 | Cec-Chr10:33120336 | 1.40E-25 | dispersed | |
Cec08g1098 | Cec-Chr8:22811002 | Cec05g0101 | Cec-Chr5:915188 | 3.00E-28 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1098 | - | - | - | 0.0 |