Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1150 ATGGCTGCCGCCCCTTCTGTTCGCGAGGAGAATGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCCCTCGACAAGGAGGAGCTCACCGTCGAGGAGAGAAACCTCCTTTCTGTCGCCTACAAGAACGTCATCGGCGCTCGCAGGGCTTCCTGGCGTATCATTTCCTCCATCGAACAAAAGGAGGAGAGCCGAGGCAACGACGACCATGTCTCTGTGATCCGTGACTATAGATCCAAAATTGAGACCGAACTCTCCAATATTTGCGATGGAATCCTCAAGCTTCTCGATTCCAGACTCATTCCCTCCGCCGCTTCCGGAGATTCCAAGGTTTTTTACCTCAAAATGAAGGGAGATTACCATAGATACCTCGCCGAATTCAAAACCGGAGCCGAACGCAAGGAAGCTGCTGAAAGCACTCTCACTGCGTACAAAGCCGCTCAGGATATTGCAAATGCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCCCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCACCTGATCGTGCCTGCAGTCTTGCAAAACAGGCGTTTGATGAAGCTATCGCTGAATTGGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTGATCATGCAGCTTCTTCGCGATAATCTCACTCTCTGGACATCGGACATGCAGGATGATGGTGCTGATGAGATTAAAGAAGCTCCCCCCAAGCGTGAGGATGAAAAGCAGTGA 786 50.13 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASLDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23406902 23408549 + CePI673135_08g011500.1 Cec08g1150 209792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1150 261 FunFam 14-3-3 protein epsilon 4 251 - -
Cec08g1150 261 Gene3D - 2 251 IPR036815 -
Cec08g1150 261 MobiDBLite consensus disorder prediction 243 261 - -
Cec08g1150 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Cec08g1150 261 Coils Coil 14 41 - -
Cec08g1150 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cec08g1150 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cec08g1150 261 SMART 1433_4 8 251 IPR023410 -
Cec08g1150 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cec08g1150 261 MobiDBLite consensus disorder prediction 242 261 - -
Cec08g1150 261 PIRSF 14-3-3 2 250 IPR000308 -
Cec08g1150 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Cec08g1150 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cec08g1150 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cec08g1150 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cec08g1150 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cec08g1150 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cec08g1150 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1137 Cec-Chr8:23287433 Cec08g1150 Cec-Chr8:23406902 4.50E-91 dispersed
Cec08g1150 Cec-Chr8:23406902 Cec11g1500 Cec-Chr11:29209278 2.00E-102 dispersed
Cec07g1738 Cec-Chr7:32934785 Cec08g1150 Cec-Chr8:23406902 1.40E-119 transposed
Cec11g1476 Cec-Chr11:28968405 Cec08g1150 Cec-Chr8:23406902 3.90E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1150 K06630 - csv:101220164 508.834