Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1154 ATGACGGCGGTTACAATTACAAGCTGCTTCGTCCTTCAACGCGGAAATGGTATCAAGCAAAAGGCAATGTGCGGCCGAATGCCGTACCAGAATCAACAACACCAAAACTACACACCGCTTTGCCCTGCCGATCTCTTCGTCGCCGCCGCTGTTGCTGCCCCTCCCGGAGAGAAACGAAGCCGTAGCCTGGAGGCTAACAGAGAGAAAGAAGGAGAGTTGTACTTTCTAACCGGTTCGCTTGGCCATTGCTCAGAGTGA 258 53.1 MTAVTITSCFVLQRGNGIKQKAMCGRMPYQNQQHQNYTPLCPADLFVAAAVAAPPGEKRSRSLEANREKEGELYFLTGSLGHCSE 85
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23436457 23436881 - CePI673135_08g011540.1 Cec08g1154 209796

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1154 K04456 - - gmx:100306337 27.7202
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g312 . Blo12g00682 . Bda03g00524 . Bpe04g00478 . . . . Cma01g01403 Cma09g00811 . . . Cpe06g00645 Cpe07g00146 . . . . . . . Cla08g01128 Cam08g1584 Cec08g1154 Cco08g1280 Clacu08g1284 . Cre08g1066 Cone4ag1380 Cone7ag1551 Cone17ag1267 . Lsi04g02374 Csa04g01819 . . . . . . . . . . . Cmo01g01453 Cmo09g00804 . . . Car09g00726 . Cpe02g00539 Bhi09g02645 . . . Hepe01g2262 Mch11g0812 . Cla11g01520 Cam11g1580 Cec11g1609 Cco11g1608 Clacu11g1736 Cmu11g1554 Cre11g1972 Lsi08g00985 . Chy07g00668 Cme07g00876
Vvi18g446 . . . . . . . . Cmo05g00538 Cmo12g00132 . . . Car12g00158 . Cpe06g00434 Cpe07g00146 Bhi04g00781 . . . . . . Cla08g01128 Cam08g1584 Cec08g1154 Cco08g1280 Clacu08g1284 . Cre08g1066 Cone4ag1322 Cone7ag1265 Cone17ag1204 Cone20ag0523 Lsi04g02249 Csa03g04460 Chy04g00241 Cme03g01846 Blo17g00111 . . Bda13g01388 . Bpe14g00463 . Bma02g00131 . . Cmo09g00558 Cma12g00171 Cma05g00510 Car05g00461 Car09g00498 Cpe11g00451 . Bhi09g02458 . . . . . . Cla11g01396 Cam11g1452 Cec11g1480 Cco11g1477 Clacu11g1611 Cmu11g1430 Cre11g1850 Lsi08g00985 Csa02g02168 Chy03g01349 Cme04g00269
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0022758 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1