Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1180 | ATGATGGGCCCACCTCCCCAGACAGCAGCTCCTTCTGCTTCTGCCATAATACACGTGTCAGCATGGGACGAAAAAGACAGCATCCCAGTACGTTTGGCTAGTCTTCGGCGGCTTCTGGGCTCTGTTTTTCGCTTTGATTGGGAGATTGGAACAGAGAGAGGGGAAGAGAAAAAGGGGAAAGGGATTTTTTTAGCAATGGCTCCTAGTTTTGACCTTGCTGTTTCTAACCTTTTATGTGCTGAAGAGAATTGCATTTTTGATAATAACGACGACGATGATGAAACAGTAGTTGAGGAGTTCTTGATGGCTCCTTATTATCTTAGAACTCGTCCGAATCGGAACCCCCACCGTGGCGGCGGTGGCGACAGTGATGATGGGTTGCTGTTTATGAGCGATGAATGTTTGATTGAAATGGTTGAGAAGGAAACCCATCACTTGCCTGTTGATGGGTATCTCATGAAGTTGCAGAACGGCGACTTGGATGTTGGAGCAAGAAAAGAGGCCGTCGATTGGATTCAAAAGGTGAGTGCTCATTTCAGTTTTGGACCTCTCTGTACATACTTGGCTGTAAACTACTTGGATCGTTTCCTCTCTGCTTACGATCTACCCAAAGGTAAAGCTTGGACAATGCAGTTGCTTGCTGTGGCATGTATGTCCCTTGCAGCCAAAATGGAGGAGGCTGAAGTCCCACTCTCTTTGGATTTACAGGTGGGTGGATCAAAATTTGTGTTTGAAGCAAGAACCATTCAAAGAATGGAGCTTTTAGTCTTGACAACATTGGGGTGGAGAATGCAAGCAGTTACACCTTTCTCTTTTATCGATCATTACCTTCGCAAGATTAACGACGACGAACTCTCTATCAAAATGTCGATCACCCGATCGATTCATCTACTCTTGAACATAATACAAGGGATTGACTTCTTGGAATTCAAACCTTCTGAAATTGCTGCAGCTGTGGCAATATCAGTAGCTGGGCAAGCTCAATCATTGGACCCTGAGAGAGCAATTCCTCTTCTCATTCAGCAACTCCAAATGGAAAGAGTTCTGAAGTGTCTTAATTTAATCAATGACACGTTCTTAACCTGTGGGGGTGGGATGGTGAAGGACTCGAGAGTGGCGACGTCGGAGCCCCGGAGCCCGAGCGGGGTGTTGGACGTGACGTGTTTAAGTTATAAAAGCAATGATACAGCAGTTGGGTCATGTGCAAACTCTTCTCATCATAACAGCTCAGAGGCTACAAAGAGGAGGAGACTGAACAGACCCTGTGAAGTGGAGCTATAG | 1281 | 45.9 | MMGPPPQTAAPSASAIIHVSAWDEKDSIPVRLASLRRLLGSVFRFDWEIGTERGEEKKGKGIFLAMAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFLMAPYYLRTRPNRNPHRGGGGDSDDGLLFMSDECLIEMVEKETHHLPVDGYLMKLQNGDLDVGARKEAVDWIQKVSAHFSFGPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKMEEAEVPLSLDLQVGGSKFVFEARTIQRMELLVLTTLGWRMQAVTPFSFIDHYLRKINDDELSIKMSITRSIHLLLNIIQGIDFLEFKPSEIAAAVAISVAGQAQSLDPERAIPLLIQQLQMERVLKCLNLINDTFLTCGGGMVKDSRVATSEPRSPSGVLDVTCLSYKSNDTAVGSCANSSHHNSSEATKRRRLNRPCEVEL | 426 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 23697968 | 23701862 | - | CePI673135_08g011800.1 | Cec08g1180 | 209822 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1180 | 426 | Pfam | Cyclin, C-terminal domain | 267 | 359 | IPR004367 | - | |
Cec08g1180 | 426 | CDD | CYCLIN_AtCycD-like_rpt1 | 164 | 262 | - | - | |
Cec08g1180 | 426 | Gene3D | - | 137 | 339 | - | - | |
Cec08g1180 | 426 | SUPERFAMILY | Cyclin-like | 249 | 360 | IPR036915 | - | |
Cec08g1180 | 426 | SMART | Cyclin_C_2 | 267 | 392 | IPR004367 | - | |
Cec08g1180 | 426 | FunFam | D6-type cyclin | 264 | 353 | - | - | |
Cec08g1180 | 426 | Gene3D | - | 148 | 265 | - | - | |
Cec08g1180 | 426 | FunFam | D2/4-type cyclin | 148 | 263 | - | - | |
Cec08g1180 | 426 | SMART | cyclin_7 | 170 | 258 | IPR013763 | - | |
Cec08g1180 | 426 | Pfam | Cyclin, N-terminal domain | 138 | 264 | IPR006671 | - | |
Cec08g1180 | 426 | SUPERFAMILY | Cyclin-like | 129 | 264 | IPR036915 | - | |
Cec08g1180 | 426 | MobiDBLite | consensus disorder prediction | 399 | 420 | - | - | |
Cec08g1180 | 426 | CDD | CYCLIN_AtCycD-like_rpt2 | 267 | 355 | - | - | |
Cec08g1180 | 426 | PANTHER | CYCLINS | 136 | 332 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1186 | Cec-Chr2:27972102 | Cec08g1180 | Cec-Chr8:23697968 | 9.50E-30 | dispersed | |
Cec05g2245 | Cec-Chr5:33906360 | Cec08g1180 | Cec-Chr8:23697968 | 1.80E-33 | dispersed | |
Cec08g1180 | Cec-Chr8:23697968 | Cec10g1023 | Cec-Chr10:22983748 | 1.60E-48 | dispersed | |
Cec05g2734 | Cec-Chr5:37842827 | Cec08g1180 | Cec-Chr8:23697968 | 1.00E-44 | transposed | |
Cec09g2170 | Cec-Chr9:38626386 | Cec08g1180 | Cec-Chr8:23697968 | 6.30E-48 | transposed | |
Cec04g1542 | Cec-Chr4:34912459 | Cec08g1180 | Cec-Chr8:23697968 | 1.90E-77 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1180 | K18810 | - | csv:101216206 | 617.846 |