Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1199 ATGGTTCATCCTGGTTCTACCCAATTTTCACATAAATTGGGGATTCAAAGTGTTCATGGATGCAATAAGTTACATATTAGTATCAAGGGAAAGACTCGTCTACATCTTGTTACTATCGTTCCTTCATCACATGGTCTGAGGCATGATCCTGTAAGTCTTCAGCTCTTAAGGAGTGTAAGTCGACCAATGTATCCTGTGTCTTCCAGAGCAAATGTTTTTGTGTTTCGATCTGTTCTGGAATCAGGTGGTGGAGCTGGGACTGCCGTTCTAAACTCTGCAGCTGTAGTTTTGACAAGATCTTATGATGCTTTACGAGGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGTGTCATTGCTTTTGCTGCTTGGGGTGTTGGACCTCTTATGCGTTTGGGGAGGATACTATTTCTTCATGAGCCGGATGGCAGTTGGAAGAAAAGTAGTACATACTATGTTACGACTTCTTATGTTCAGCCTTTACTGCTATGGACTGGAGCTACACTGATCTGCAGGGCATTGGATCCAGTAGTTTTACCTTCAGTAGCCAGTCAGGCTGTCAAACAACGACTTCTGAATTTTGTTAGATCTTTGTCTACTGTTCTCGCATTTGCCTATTGTATATCCAGCTTGATTCAACAAGTACAAAAATTCGCTTCTGAATCAAATGACTCAAGTGATGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTTTACACTGCAGTCTGGATTGCTGCCCTTTCATTGTTCATGGAGTTGCTCGGTTTTTCTACCCAGAAGTGGCTAACAGCTGGGGGTCTCGGAACCGTATTGCTTACCCTTGCTGGTCGTGAGATATTTACTAACTTCCTTTCAAGTGTAATGATTCATGCAACACGACCATTTGTCGTAAATGAATGGATTCAAACAAAGATTGATGGATATGAAGTCTCAGGAACGGTTGAGCACGTTGGTTGGTGGTCGCCAACCATCATCCGAGGCGATGATCGTGAAGCAGTCCATATTCCAAATCACAAATTCACGGTTAGTATTGTGAGGAATCTTACCCAAAAGACTCATTGGCGTATCAAGACTCATCTTGCCATCAGCCACTTAGATGTTAATAAGATCAATTATATTGTAGCTGATATGCGCAAAGTTCTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGCAGAATTTTTTTGGATAACGTCAATCCTGAAAACCAGGCTCTTATGATCATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTATGTGTCAAGGAGGCAATTCTCTTGGATCTCCTCAGGGTTATCAGCCACCATAGGGCCCGCCTCGCCACTCCCATTCGCACTGTTCAGAAAATATATGGCGAAGCTGATTTGGAGAATGTACCATTTTCCGAGACCATGTATTCTCGTTCCAACCGTCCTCTGCTTCTTATTGAGCCATCTTATAAAGTCAATGGTGACGATAAAACCAAAGTCTCTAGTCGTCCCACTCGTTCATCTAACGAAGAAAAGGAAGCGAAACAAGAGGCAGTCTCAACATCAGGGACAAAAGCCCCCGACACAGCTGGATCAACATCAAATCTATCAAGCAATGAGATAAAAGGAGAAAAGAAAGATGTCATAGGAATGAATTCCAAGGACAATATGCCACGAGGGACTCCGCCCAAAAGATCTCCCTCAGCTGCCAGTCCTAGCAGTGAGAAAGCTGATATTCCTTCCTCAAGCTCACAGAATAAGCAAGATGGCGAGAAGACCTCTGCATCGCCATCAGTGGCGAGGGCACCATTGGAGGAGAATATTGTCCTGGGAGTTGCGTTAGAAGGCTCGAAAAGAACTCTTCCAATTGATGAAGATTTGGATTCAAAAGAAATTTCGACACAGAGGAATGGGAGTGAGTTTCCCGGCAACAGTAAGGATATGAAAGATGGCCAAATGCCTGCAGTTCCAGGTGCGACAAAAAATGATTGA 1989 43.24 MVHPGSTQFSHKLGIQSVHGCNKLHISIKGKTRLHLVTIVPSSHGLRHDPVSLQLLRSVSRPMYPVSSRANVFVFRSVLESGGGAGTAVLNSAAVVLTRSYDALRGSPLLLKLIPAACVIAFAAWGVGPLMRLGRILFLHEPDGSWKKSSTYYVTTSYVQPLLLWTGATLICRALDPVVLPSVASQAVKQRLLNFVRSLSTVLAFAYCISSLIQQVQKFASESNDSSDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNVNPENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYGEADLENVPFSETMYSRSNRPLLLIEPSYKVNGDDKTKVSSRPTRSSNEEKEAKQEAVSTSGTKAPDTAGSTSNLSSNEIKGEKKDVIGMNSKDNMPRGTPPKRSPSAASPSSEKADIPSSSSQNKQDGEKTSASPSVARAPLEENIVLGVALEGSKRTLPIDEDLDSKEISTQRNGSEFPGNSKDMKDGQMPAVPGATKND 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23895984 23901206 + CePI673135_08g011990.1 Cec08g1199 209841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1199 662 Gene3D - 298 353 IPR023408 -
Cec08g1199 662 MobiDBLite consensus disorder prediction 518 538 - -
Cec08g1199 662 MobiDBLite consensus disorder prediction 565 594 - -
Cec08g1199 662 MobiDBLite consensus disorder prediction 486 662 - -
Cec08g1199 662 MobiDBLite consensus disorder prediction 618 632 - -
Cec08g1199 662 Gene3D - 194 296 - -
Cec08g1199 662 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 649 IPR045042 -
Cec08g1199 662 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Cec08g1199 662 Pfam Mechanosensitive ion channel, beta-domain 282 352 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec08g1199 662 MobiDBLite consensus disorder prediction 491 517 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1199 Cec-Chr8:23895984 Cec10g0751 Cec-Chr10:11212015 1.40E-187 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1199 K22047 - csv:101213477 1201.81