Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1205 ATGAAAGGCGATTTTGCTCATCCCAAGAGCAAAACTTCCAATATGTTATCCAAATTCCATCTCTCCGCCCACCCTTTTTCCCACCATCCTCCGCCGCAACAACCCGCCGACGAGCCCACCGCCGCCGTGCCTTCCCCCTTTAAACACCGCCCGGAGCTAACTTCCACCGCTGATGGTTCCACCATCGAGGTGGTCCGACGGCCGAGGGGTCGCCCACCGGGTTCCAAAAATAAACCCAAACCGCCTCTTGTTATAACCCGGGAACCCGAACCGGCTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAACGACGTCGTTGAAGCTATTTCACGATTTTGCCGTCGCAAAAATATGGGCCTTTGTGTTCTTAACGGTTCCGGTACCGTTGCTAATGTCTCTCTCCGTCAACCCTCCGCCACACCTGGCGCTACCGTTACTTTTCACGGCCGTTTTGAGATTCTCTCCATTTCCGCTACCGTCTTCCCTCAAACCACGCCGCTACCTTTGCCTAATGGTTTTACCATCTCCCTCGCCGGACCTCAGGGTCAAATCGTCGGCGGTTTGGTCGCCGGTGCTTTAATTGCCGCCGGTACCGTTTTTGTCGTTGCCTCGTCGTTCAATAATCCGCTGTACCACCGGCTTCCCGATGAGGAAGAGATTAAGAATTTGGGATCCGGTGGCGGCAGTGGCGGTGGCGAAGTTCATTCCCCACACGTCTCTGGCGGTGGAGATAGTAGCGGGCACGGGCAGGGGCAGAGTCAAGGGCACGGGCAGCTGGTGGAATCGTGTGGAATGGCTATGTATAGTTGCCACGCTCCGTCCGACGTAATATGGGCGCCGACGGCGAGACAACCGCCGCCGCCGCCGTACTAA 876 56.85 MKGDFAHPKSKTSNMLSKFHLSAHPFSHHPPPQQPADEPTAAVPSPFKHRPELTSTADGSTIEVVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGLCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQTTPLPLPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSSGHGQGQSQGHGQLVESCGMAMYSCHAPSDVIWAPTARQPPPPPY 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23980663 23981538 + CePI673135_08g012050.1 Cec08g1205 209847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1205 291 FunFam AT-hook motif nuclear-localized protein 94 226 - -
Cec08g1205 291 ProSiteProfiles PPC domain profile profile. 90 228 IPR005175 -
Cec08g1205 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 219 - -
Cec08g1205 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 208 IPR005175 -
Cec08g1205 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 48 259 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec08g1205 291 PIRSF ESCAROLA 9 290 IPR014476 GO:0003680(InterPro)
Cec08g1205 291 Gene3D - 93 225 - -
Cec08g1205 291 MobiDBLite consensus disorder prediction 1 86 - -
Cec08g1205 291 MobiDBLite consensus disorder prediction 222 258 - -
Cec08g1205 291 MobiDBLite consensus disorder prediction 244 258 - -
Cec08g1205 291 CDD DUF296 94 207 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1314 Cec-Chr3:29417900 Cec08g1205 Cec-Chr8:23980663 2.00E-36 dispersed
Cec08g1205 Cec-Chr8:23980663 Cec09g1211 Cec-Chr9:12651514 3.70E-44 dispersed
Cec11g1507 Cec-Chr11:29283205 Cec08g1205 Cec-Chr8:23980663 8.40E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1205 - - - 0.0