Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1264 | ATGGCCAGAATTGCAATGGGAAGCATCGGCGAGGCCTCCCAGCCCGACTGCATCCAAGCCCTCATTGTCGAGTTCATTGTCACTTTCCTTTTCGTCTTTGCTGGCGTCGGATCAGCCATGGCTGCCAATGCGTTATTGGCAAACACACTAGTGGGTTTATTTGCCGTTGCCGTCGCACATGCGCTTGTAGTGGCTGTGATGATTTCCACAGGTCATATTTCCGGTGGCCACCTCAACCCCGCCGTTACTCTTGGTCTCCTTTTGGGTGGCCACATCACAGTTGTTCGATCCGTTCTATATTGGATCGTTCAGTTACTGGCAGCTTCAGCTGCTAGCTTTTTGTTAACGTACCTCACCGGAGGCTTGGTCACTCCAATTCATACATTAGCAAGTGGAGTTGGTTATATTCAGGGAGTGATATGGGAGATTATTCTAACCTTTTCCTTGCTATTCACTGTGTATGGAACAATTGTTGACCCAAAAAAGGGGGCTCTTGATGGGCTGGGTCCATTGCTGACTGGGTTTGTGGTGGGGGCCAACATCTTGGCTGGTGGGGCTTTTTCAGGAGCTTCAATGAACCCAGCAAGATCATTTGGGCCAGCTTTGGTGGCTGGAGACTGGACTGACCATTGGGTTTACTGGGTTGGGCCTCTTATTGGTGGTGGGCTTGCTGGATTCATCTATGAAAATTTTCTCATTCAAAGATCTCATGTGCCTCTACCTAGGGAGGAAGATGGCTATTAG | 744 | 49.46 | MARIAMGSIGEASQPDCIQALIVEFIVTFLFVFAGVGSAMAANALLANTLVGLFAVAVAHALVVAVMISTGHISGGHLNPAVTLGLLLGGHITVVRSVLYWIVQLLAASAASFLLTYLTGGLVTPIHTLASGVGYIQGVIWEIILTFSLLFTVYGTIVDPKKGALDGLGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVAGDWTDHWVYWVGPLIGGGLAGFIYENFLIQRSHVPLPREEDGY | 247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 24605311 | 24606426 | - | CePI673135_08g012640.1 | Cec08g1264 | 209906 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1264 | 247 | PANTHER | AQUAPORIN-8 | 1 | 237 | IPR034294 | GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) | |
Cec08g1264 | 247 | PRINTS | Major intrinsic protein family signature | 59 | 83 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g1264 | 247 | PRINTS | Major intrinsic protein family signature | 19 | 38 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g1264 | 247 | PRINTS | Major intrinsic protein family signature | 141 | 159 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g1264 | 247 | PRINTS | Major intrinsic protein family signature | 174 | 196 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g1264 | 247 | PRINTS | Major intrinsic protein family signature | 96 | 115 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g1264 | 247 | PRINTS | Major intrinsic protein family signature | 211 | 231 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g1264 | 247 | Gene3D | Glycerol uptake facilitator protein. | 2 | 242 | IPR023271 | - | |
Cec08g1264 | 247 | FunFam | Probable aquaporin TIP1-1 | 2 | 244 | - | - | |
Cec08g1264 | 247 | Pfam | Major intrinsic protein | 12 | 228 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec08g1264 | 247 | SUPERFAMILY | Aquaporin-like | 14 | 241 | IPR023271 | - | |
Cec08g1264 | 247 | ProSitePatterns | MIP family signature. | 77 | 85 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1264 | Cec-Chr8:24605311 | Cec09g0187 | Cec-Chr9:1663622 | 3.80E-66 | dispersed | |
Cec08g1264 | Cec-Chr8:24605311 | Cec04g1088 | Cec-Chr4:30392241 | 5.50E-65 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1264 | K09873 | - | csv:101205380 | 444.891 |