Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1264 ATGGCCAGAATTGCAATGGGAAGCATCGGCGAGGCCTCCCAGCCCGACTGCATCCAAGCCCTCATTGTCGAGTTCATTGTCACTTTCCTTTTCGTCTTTGCTGGCGTCGGATCAGCCATGGCTGCCAATGCGTTATTGGCAAACACACTAGTGGGTTTATTTGCCGTTGCCGTCGCACATGCGCTTGTAGTGGCTGTGATGATTTCCACAGGTCATATTTCCGGTGGCCACCTCAACCCCGCCGTTACTCTTGGTCTCCTTTTGGGTGGCCACATCACAGTTGTTCGATCCGTTCTATATTGGATCGTTCAGTTACTGGCAGCTTCAGCTGCTAGCTTTTTGTTAACGTACCTCACCGGAGGCTTGGTCACTCCAATTCATACATTAGCAAGTGGAGTTGGTTATATTCAGGGAGTGATATGGGAGATTATTCTAACCTTTTCCTTGCTATTCACTGTGTATGGAACAATTGTTGACCCAAAAAAGGGGGCTCTTGATGGGCTGGGTCCATTGCTGACTGGGTTTGTGGTGGGGGCCAACATCTTGGCTGGTGGGGCTTTTTCAGGAGCTTCAATGAACCCAGCAAGATCATTTGGGCCAGCTTTGGTGGCTGGAGACTGGACTGACCATTGGGTTTACTGGGTTGGGCCTCTTATTGGTGGTGGGCTTGCTGGATTCATCTATGAAAATTTTCTCATTCAAAGATCTCATGTGCCTCTACCTAGGGAGGAAGATGGCTATTAG 744 49.46 MARIAMGSIGEASQPDCIQALIVEFIVTFLFVFAGVGSAMAANALLANTLVGLFAVAVAHALVVAVMISTGHISGGHLNPAVTLGLLLGGHITVVRSVLYWIVQLLAASAASFLLTYLTGGLVTPIHTLASGVGYIQGVIWEIILTFSLLFTVYGTIVDPKKGALDGLGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVAGDWTDHWVYWVGPLIGGGLAGFIYENFLIQRSHVPLPREEDGY 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24605311 24606426 - CePI673135_08g012640.1 Cec08g1264 209906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1264 247 PANTHER AQUAPORIN-8 1 237 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Cec08g1264 247 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec08g1264 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec08g1264 247 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec08g1264 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec08g1264 247 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec08g1264 247 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec08g1264 247 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
Cec08g1264 247 FunFam Probable aquaporin TIP1-1 2 244 - -
Cec08g1264 247 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec08g1264 247 SUPERFAMILY Aquaporin-like 14 241 IPR023271 -
Cec08g1264 247 ProSitePatterns MIP family signature. 77 85 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1264 Cec-Chr8:24605311 Cec09g0187 Cec-Chr9:1663622 3.80E-66 dispersed
Cec08g1264 Cec-Chr8:24605311 Cec04g1088 Cec-Chr4:30392241 5.50E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1264 K09873 - csv:101205380 444.891