Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1293 ATGTGGAGTCAGAAGCAATCAATTGGTGGTAAGGAAAGGAAAGAGCTGGCCACAGGCAATCAATTAGTGGGAATCGCCATTGACAAGGATAAAGGAAGTCAAGTTGCTCTCAAATGGGCCACTGAGAATCTCCTTGTAAAGGGCCAAACTGCCATTCTCATCCACGTTAAACTCCGACCTTCCACCTATCCTGGCTCTTCTCTCGCTACCCCTAAGGTGATGTCGGCATCTGATACTGGCAGTGGCAATGGCAATGTTATGGTAAGCAAGGATATGGATCCGAGCACAAGGGATTTGTTCCTTCCTTTTCGCTGCTTCTGTACGCGTAAAGATATATTTTGCAAAGACATCGTCCTTGAAGATTTAGACGTTGCAAAAGCGTTGATCGAATATGTCACTCAGGCTGGAATTGAGAATTTGGTTGTTGGTGCCACGACTAAAAGTGGCTTCTTGAGAAGATTCAAGACGACAGATATTCCAGGCAGTGTTGTCAAAGGAGCACCAGATTTCTGCAATGTTTATGTCATATCAAGAGGGAAAATCCAAACTATGCGATCAGCCTCACGTCCTGCTCCCGCTTCGTCTCCTCTACGAAGTTTATTGCTGAGCCAAGCTGGTATCAAATCACATTCAGCAGAGTCACCAGTTCCTCAGATTCAAAGACCTGAAAAGCCTCCCCTTGAAGCAGCACGTAGATCTCAGGACAACATCGAGTTCAGGTCGCCGTTCACTAGGAAAGGCTACAATGGAAAAATGCCAGGGGAAGTCAGTCAGCCAGATACTGATATTTCTTTCGTTAGCTCGGGAAGGCCGAGTGTTGATAGATTATTCCCTACATTGTATGACAACCTGGATACAGGAAGGGTTCCCCCACGGCTGTCCAGTGGCAACGATGCTGATATATACAATAGCTTCGAGTCACAGCAGTTCGGACGCAAATCATTGGATGTAAACTATCCACCTGAATTTTTATCGGTCTTCTCAGAAGGTGACAGATTGTCGACTTCGTCACAGAGTATGGAAGAAGTAGAGGCTGAAATGAGGAGGCTGAAGCTGGAACTAAAGCAAACCATGGAAATGTATAGCACAGCCTGCAAGGAAGCACTAACAGCTAAACAAAAGGCAATAGAGCTTCAACGATGGAAATCTGAGGAAGAGCGTAGAATAGAGGAGGCAAGACTTGCAGAGGAAGCTGCATTAGCGATGGTTGAGCAGGAAAAGGCGAAGTCTCGAGCTGCTATTGAGGCTGCTGAGGCAGCTAAAAGGATCGCTGAGTTGGAAGCACAGAAGAGAATTAACGCGGAAAAGAAAGCATTCAAGGAAGCAGAAGAGAAGAAGAAGGCATTAGATGCTTTGGCAAACAATGATGTCAGGTATCGGAAGTATTCAATTGACGAGATTGAAACTGCTACTGAGTTTTTTTCAGAATCTTTAAAGATTGGAGAGGGAGGTTATGGGCCTGTTTATAAAGGTTATTTGGACCACACACCAGTTGCAATCAAGGTCTTACGTCCGGATGCGGCTCAAGGAAGGTCACAGTTCCAGCAAGAGGTTGAAGTACTAAGCTGCATACGACATCCTAACATGGTTCTTCTCCTTGGAGCATGCCCCGAATATGGCTGCTTGGTCTATGAGTTCATGGCACATGGTAGCTTGGATGACTGCCTCTTTCACCGAAGAGAAAACTCAAAACCTCTTTCTTGGCAACGTAGATTCAAAATTGCAGCTGAAATTGGCACTGCCTTGTTGTTCCTCCACCAGACTAAGCCTGAGCCTCTTGTGCACCGTGATTTGAAACCGGCCAACATCTTGCTCGATCGTAACTATGTTAGCAAGATTAGCGACGTTGGTTTGGCCAGGCTTGTTCCCCCATCTGTAGCCAACAGTGTGACACAATATAGAATGACTTCAACTGCTGGCACATTCTGTTATATCGATCCCGAGTATCAACAAACGGGCATGCTTGGGGTAAAGTCCGACATATATTCATTGGGAATCATGTTTTTGCAGTTGATTACAGCAAGGGCACCCATGGGATTGACTCACCATGTGGGAAGAGCTATTGAGAAAGGGACTTTGTCAGAAATTCTTGATCCATCTGTTACCGATTGGCCAGCTGAAGAAACGTTATGCTTTGCAGAGTTGGCTTTAAAATGTGCAGAGTTGAGAAGGAAAGACCGACCTGATCTCGGTAAGGTTGTTCTTCCAGAACTCATCAGATTTCAATCGCTAGCCGAAGCCAGCATGTACACACCGGTGACGGACGGTGTTAGCAGCCCTGTGTTCAGCCACAGCCAGGTTCCTATGAGAAAAGACGGCGAATGTTTTTCCTCACAATCTAGCAATAGCCATGGAGTCTTATCGCGCTCGGCGTCGTAG 2379 46.11 MWSQKQSIGGKERKELATGNQLVGIAIDKDKGSQVALKWATENLLVKGQTAILIHVKLRPSTYPGSSLATPKVMSASDTGSGNGNVMVSKDMDPSTRDLFLPFRCFCTRKDIFCKDIVLEDLDVAKALIEYVTQAGIENLVVGATTKSGFLRRFKTTDIPGSVVKGAPDFCNVYVISRGKIQTMRSASRPAPASSPLRSLLLSQAGIKSHSAESPVPQIQRPEKPPLEAARRSQDNIEFRSPFTRKGYNGKMPGEVSQPDTDISFVSSGRPSVDRLFPTLYDNLDTGRVPPRLSSGNDADIYNSFESQQFGRKSLDVNYPPEFLSVFSEGDRLSTSSQSMEEVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAIELQRWKSEEERRIEEARLAEEAALAMVEQEKAKSRAAIEAAEAAKRIAELEAQKRINAEKKAFKEAEEKKKALDALANNDVRYRKYSIDEIETATEFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMAHGSLDDCLFHRRENSKPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVANSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITARAPMGLTHHVGRAIEKGTLSEILDPSVTDWPAEETLCFAELALKCAELRRKDRPDLGKVVLPELIRFQSLAEASMYTPVTDGVSSPVFSHSQVPMRKDGECFSSQSSNSHGVLSRSAS 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24916312 24921280 + CePI673135_08g012930.1 Cec08g1293 209935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1293 792 PANTHER OS02G0152300 PROTEIN 25 765 IPR051348 -
Cec08g1293 792 Gene3D Transferase(Phosphotransferase) domain 1 547 748 - -
Cec08g1293 792 CDD STK_N 22 179 - -
Cec08g1293 792 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 446 546 - -
Cec08g1293 792 SMART serkin_6 474 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1293 792 Coils Coil 333 360 - -
Cec08g1293 792 Gene3D HUPs 21 176 IPR014729 -
Cec08g1293 792 Coils Coil 400 455 - -
Cec08g1293 792 ProSiteProfiles Protein kinase domain profile. 474 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1293 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g1293 792 Gene3D Phosphorylase Kinase; domain 1 452 546 - -
Cec08g1293 792 MobiDBLite consensus disorder prediction 773 792 - -
Cec08g1293 792 Pfam Protein kinase domain 477 729 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1293 792 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 172 - -
Cec08g1293 792 MobiDBLite consensus disorder prediction 209 232 - -
Cec08g1293 792 SUPERFAMILY Protein kinase-like (PK-like) 458 734 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2872 Cec-Chr5:38896352 Cec08g1293 Cec-Chr8:24916312 8.80E-295 dispersed
Cec08g1293 Cec-Chr8:24916312 Cec11g1173 Cec-Chr11:24038135 4.90E-216 dispersed
Cec08g1293 Cec-Chr8:24916312 Cec08g1030 Cec-Chr8:22233607 1.30E-200 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72211 PF00069 Pkinase 2.60E-38 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1293 - - - 0.0