Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1329 ATGATATTTATATGTCTGTTCGGTAGGCGACTCGTTCAAAAAAACTCCATCTCCTTCCCGCTCCTTCTCCCCGCTCCTCGCCCTGTTCCTCACCCGCTAGCTCCGTCACCTATGCCCGCCGTCTCATTCCATTTTTATGCACTCAAAGCTATGGCCGACTGGCTGATCGGAGAAGATGTTGGAATGGAGCTTCCCAGTGAATGCTCTCTTCGATATGCGGCATTGTCTTGCATTTACGATTACTTGATTTCAATGTTTCCCTGTTCTGTGAACTCTGAAGTTTTTCTTTCTTTGACTGTTTTTTTCTGCGTTGGTTGCTCCTTGCTGCAATATTGTTCTATTGCTGAAAGAAAGAAATTCAGTTCTGGAGGCGTAACATGGTTCTGTATCAACATGCACATATCTGAGCTCAATTCCTTTTCATATGGGTACCAGATGCAGTTTTCATTTCAAAGTGCTAGCAAAATTCTCTTTACGAGTTCAAATGCCAAGGTCGCTGTCAGAATCACGCGCTCCCAGTCTAATTCCTCAAGCAGACTAGGAGCTAATTCACCCTCATTGCAACTTTCACTCAAAGAATTGCGCAAACGTGGCCATACAGAAGACTCTGAACGAGCACAACTAGATGGAAGTAATGCTTCCACAACTATTACTGTTGGTGTTCGGCGCAAAAGAAGATCAGTGCTCAAGGATGTTACCAACATGTCCTGTGAGAGCAGTAATCTGGGGTGCTTGCATGCTTCTAAAGTTCAGGTGCAAGAGGTTTCACAGATTGAATCACTTGAAGATTCACCCGTTAAAAGGATGGCAGAATCACTAGGTACCTCTCCAGTGATGAGGTCAGACAAACAAGAGACAACACAGGCGAACAAGTTTCAGAGTGTCATAGGATGCAAAAATTGTGCGTTCCCCATGCCTTCAGGATCAAACGACCACCAAATGAAAGTTGAGGCTACGGTTTGTGAGAAATTAAACCATCTCGGTAGTTTGGATGCTATTTCAAACTCGGAAGATCCTCAAGCTTGCACCCTATATGCCCATAATATATATGATACTAATCGTGTTATAGAGCTCGATCAAAGGCCTTCTACTAATTATATGGAAAAGTTACAGAAATATATCACTCCAATCATGCGAGGGATTCTAATTGATTGGCTAGTGGAGGTTTCTGAAGAATATAAACTGATCTCTGACACACTTTACCTCACCGTGAATCTCATTGATCGGTTTCTCTCTCAAAGTTACATTGAAAGGCATAGATTACAACTTCTTGGTGTCACTTGCATGTTAATTGCCTCTAAATATGAAGAAGTCTGTGCTCCATTTGTGGAAGAGTTTTGCTGCATCACAGACAACACCTATGCGAGAGAAGAGGTACTAAAAATGGAGGGTGAAGTTCTGAACGTGCTTAATTTTCAGCTCTCTGTTCCCACTACAAAAACATTTCTCAGGAGATTTGTGCAGGTAGCACAGGCTTCTTGCAAGGAAACTTGTGTCGAGTTCGAGCATTTAACAAATTATCTAGCAGAGTTGACTCTTGGAGAGTACAGCTTCCTCAGATTTCTGCCTTCAGCAGTAGCTGCATCAGTGGTGTTCTTAGCCAGATGGATTCTGCATCAACCAAATCAACCATGGAACCTGGCTTTAGAGCATTATACCAATTACAATGTCTCCAAGTTAAGAACTTCAGTACTTGCCTTGGAAGATCTAAGATTGAACTCCACAGGTTGCCCTTTAAACGCCGTATTCCAGAAGTATAGACAACAGAAGTTTGGAAGTGTGGCAACTTTAACATCCACAAAATCAGTTCTCTCAGCTTTCCCCAACCAGACAGATACCTGA 1842 42.67 MIFICLFGRRLVQKNSISFPLLLPAPRPVPHPLAPSPMPAVSFHFYALKAMADWLIGEDVGMELPSECSLRYAALSCIYDYLISMFPCSVNSEVFLSLTVFFCVGCSLLQYCSIAERKKFSSGGVTWFCINMHISELNSFSYGYQMQFSFQSASKILFTSSNAKVAVRITRSQSNSSSRLGANSPSLQLSLKELRKRGHTEDSERAQLDGSNASTTITVGVRRKRRSVLKDVTNMSCESSNLGCLHASKVQVQEVSQIESLEDSPVKRMAESLGTSPVMRSDKQETTQANKFQSVIGCKNCAFPMPSGSNDHQMKVEATVCEKLNHLGSLDAISNSEDPQACTLYAHNIYDTNRVIELDQRPSTNYMEKLQKYITPIMRGILIDWLVEVSEEYKLISDTLYLTVNLIDRFLSQSYIERHRLQLLGVTCMLIASKYEEVCAPFVEEFCCITDNTYAREEVLKMEGEVLNVLNFQLSVPTTKTFLRRFVQVAQASCKETCVEFEHLTNYLAELTLGEYSFLRFLPSAVAASVVFLARWILHQPNQPWNLALEHYTNYNVSKLRTSVLALEDLRLNSTGCPLNAVFQKYRQQKFGSVATLTSTKSVLSAFPNQTDT 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25223519 25230600 - CePI673135_08g013290.1 Cec08g1329 209971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1329 613 Gene3D - 349 596 - -
Cec08g1329 613 FunFam Cyclin A1 464 596 - -
Cec08g1329 613 SUPERFAMILY Cyclin-like 476 601 IPR036915 -
Cec08g1329 613 SMART Cyclin_C_2 477 600 IPR004367 -
Cec08g1329 613 PANTHER CYCLINS 331 587 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cec08g1329 613 Pfam Cyclin, N-terminal domain 349 475 IPR006671 -
Cec08g1329 613 SUPERFAMILY Cyclin-like 337 474 IPR036915 -
Cec08g1329 613 SMART cyclin_7 481 569 IPR013763 -
Cec08g1329 613 SMART cyclin_7 384 468 IPR013763 -
Cec08g1329 613 Pfam Cyclin, C-terminal domain 477 598 IPR004367 -
Cec08g1329 613 FunFam Mitotic cyclin 6 362 462 - -
Cec08g1329 613 Gene3D - 362 475 - -
Cec08g1329 613 ProSitePatterns Cyclins signature. 379 410 IPR048258 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1329 Cec-Chr8:25223519 Cec08g1681 Cec-Chr8:28093077 8.50E-67 dispersed
Cec05g1888 Cec-Chr5:30937193 Cec08g1329 Cec-Chr8:25223519 7.10E-109 wgd
Cec08g1329 Cec-Chr8:25223519 Cec09g0240 Cec-Chr9:2086511 2.20E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1329 K06627 - csv:101211578 777.704