Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1349 ATGTACGAGTTCCAGAAGCAGCCTTTATCTTCTCTCTGCCATATTCATCGGCCTCGAGTGATGGGGGCTCCGTTCGAGGGAATAATAAAGGATTTGAAGGGAAGGGCGGCGTGCTATAAACAGGATTGGATAAGTGCACTATGTTCTGGCGTCAGGATTTTGGCTCCTACTATGTACATTTTCTTCGCCTCAGCTCTACCTGTTATTGCCTTTGGGGAGCAACTTAGTAGGGATACAGGTGGAAGATTGAGCACCGTGGAAACATTAGCCTCAACTGCGCTGTGTGGAATTATCCACTCAATCTTTGGGGGACAGCCTTTGTTGATTTTAGGAGTGGCAGAACCAACTGTTATAATGTACATTTACTTGTACAGTTTCTCCCAAGGCCGGCCAGAGTTAGGAGGCGATCTCTTTTTAGCTTGGGCTGGATGGGTGTGCATTTGGACAGGATTCTTCCTGATCCTCCTTGCAATCTTTAATGCTTGCACCGTCATCACCAAATTTACCAGAGTTGCGGGGGAATTATTTGGCATGCTTATTGCTGTTCTTTTCTTCCAAGAGGCAATAAAGGGATTGATAAGCGAATTCCAGATTCCCAAGTCAGAAAAGCCAGAGGTATTGGAGTACCAATTTGAGTGGTTGTATGCAAATGGGTTGCTTGCGGTAATTTTTTCAATGGGTCTACTCTTCACAGCCTTGAAAAGCAGACATGCAAGATCGTGGAAATATGGAACTGGCTGGTTCCGGAGTTTCATTGCGGACTATGGGGTTCCACTTATGGTTGTGTTCTGGACAGCATTGTCATATGGAGTTCCCGGTGAAGTTCCAAATGGAGTTCCAAGGAGACTCTTTTGTCCATTACCTTGGGAACCAGCCTCATTGTACCACTGGACTGTAGTGAAGGACATGGGTAAGGTTCCGTTGACTTACATCTTTGCTGCAACTCTGCCAGCCGTCATGATAGCAGGCCTATACTTTTTTGACCATAGTGTTGCATCGCAAATGGCGCAACAGAAAGAGTTTAATCTTCAAAATCCATCTGCATATCATTATGATGTCTTCTTGCTCGGGATTATGACTGTGATTTGTGGATTGCTTGGATTGCCTCCTTCTAATGGTGTCCTCCCACAGTCCCCAATGCACACCAAGAGTCTTGCAGTGCTTAAACGGCAGCTAATTCGAAGAAAAATGGTAAAGAGTGCAAAGGAATGTATCAAACAAAAAGCAAGCAACTCCGAAATTTATGGAAAGATGCAGGCTGTGTTCATTGAAATGGACGCATCTCCAACTCCTAAAGAGCTAGAAACCTTGACAAAGGCAGTAATGAATGCTGATGAAGGTGATCGAAAGGGAAAATTTGATGCTGAGAAAAATATAGATCCTTATTTGCCTGTTCGTGTGAATGAGCAAAGGATGAGCAACTTGCTGCAGTCTTTCCTTGTTGCTGTATCAATATTTGCTATCCCTATAATGAGAATGATACCTACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCTGTTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATGTTGTTACTCTTCATTACACCCGGTCGGCGTTTCAAAGTCTTGGAGGGGTCTCATTTATCTTTCGTTGAATCTGTGCCATTCAAGATCATTGCTACGTTTACCCTCCTCCAGTTTGCATATTTCCTGTTGTGCTTTGGTGTAACATGGATACCTGTAGCTGGGATCCTGTTCCCACTGCCATTTTTCCTCCTCATTAGCATAAGAGAGCATGTGCTCCCCAAGTTCTTCCAGCATAGCCATCTTCAAGAGCTAGATGCTTCAGAGTATGAGGAGATTGCTGGTGCCGGACATCGCGCCATTAATCTCACAGCACCGGAAAAGGAACAACCTGATTCAATTGCGGAAGAGAGTAACGAAGAATACTATGATGCCGAGATATTAGATGAGATGACAACTCATAGAGGAGAATTAAAGCTTAGAACTTCAAACCAATACACCCATCCGACCGAAGGGTCGCCGCCGAGAGCGACGGCGTGGCCGGAGTACTTCAGGTCCGCCGCCGCCATCTCCGAGAGCAAGTTGAATCTGGGAATTGACAGTGTACGCGAAAAATAA 2115 45.01 MYEFQKQPLSSLCHIHRPRVMGAPFEGIIKDLKGRAACYKQDWISALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGRLSTVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYIYLYSFSQGRPELGGDLFLAWAGWVCIWTGFFLILLAIFNACTVITKFTRVAGELFGMLIAVLFFQEAIKGLISEFQIPKSEKPEVLEYQFEWLYANGLLAVIFSMGLLFTALKSRHARSWKYGTGWFRSFIADYGVPLMVVFWTALSYGVPGEVPNGVPRRLFCPLPWEPASLYHWTVVKDMGKVPLTYIFAATLPAVMIAGLYFFDHSVASQMAQQKEFNLQNPSAYHYDVFLLGIMTVICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSAKECIKQKASNSEIYGKMQAVFIEMDASPTPKELETLTKAVMNADEGDRKGKFDAEKNIDPYLPVRVNEQRMSNLLQSFLVAVSIFAIPIMRMIPTSVLWGYFAYMAVDSLPGNQFWERMLLLFITPGRRFKVLEGSHLSFVESVPFKIIATFTLLQFAYFLLCFGVTWIPVAGILFPLPFFLLISIREHVLPKFFQHSHLQELDASEYEEIAGAGHRAINLTAPEKEQPDSIAEESNEEYYDAEILDEMTTHRGELKLRTSNQYTHPTEGSPPRATAWPEYFRSAAAISESKLNLGIDSVREK 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25407628 25416666 + CePI673135_08g013490.1 Cec08g1349 209991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1349 704 PANTHER ANION EXCHANGE PROTEIN 21 654 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cec08g1349 704 MobiDBLite consensus disorder prediction 657 671 - -
Cec08g1349 704 MobiDBLite consensus disorder prediction 657 677 - -
Cec08g1349 704 Gene3D Helical hairpin bin 35 77 - -
Cec08g1349 704 FunFam probable boron transporter 2 35 77 - -
Cec08g1349 704 Pfam HCO3- transporter integral membrane domain 24 202 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec08g1349 704 Pfam HCO3- transporter integral membrane domain 217 391 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec08g1349 704 Pfam HCO3- transporter integral membrane domain 465 607 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0511 Cec-Chr1:5170315 Cec08g1349 Cec-Chr8:25407628 4.20E-259 dispersed
Cec08g1349 Cec-Chr8:25407628 Cec10g1180 Cec-Chr10:25752664 2.80E-215 dispersed
Cec07g1406 Cec-Chr7:29629289 Cec08g1349 Cec-Chr8:25407628 1.10E-269 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1349 K24194 - csv:101220188 1212.59