Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1373 ATGGAGGAATATCCGAGTTTTCCTGTTTGTTCGACGCATTTTCCGGGAAAAGCTGGGATCCTCTTCTATTTCAACTTTGTTGCAAGAGACAAATGCCGCGCTTACTTCATGGGACGCTTCATGCCGAAATATATGGAATCGACAGGCTTCAAACTGGATGTCCTATTTTCTGCGGGAAGGATAAAAGGGAGCAAGTTCCACAATAGAATTTCTATGGCCTTTGATCTTGATAAGGCCAGAGTTGGCCGGACGAGGATAGTAGATCAGCCATACGCTCCTGAATGGAACGATCATTTTCGTATATATTGTGCTCATACAGTGTCACATATTATATTCACAGTTAAAGATGGAGGTCTAATCGGTGCAACATTGATTGGAAGAGCTTATGTGCCTGTTGAGGATATCATTAAGGGATTTGTATATGAGAAATGGGTTGAAATATTAGATGAAGACGGTAAGCCTTTATATGGTCGTTCTAGAATCCATGTGAAGTTACAATTTTCAAGTGTTAATGAAGACAGGAACTGGTCCCGAGGAATTCCAGATCCTTTCGGTGGTGTACCTTTCACATTCTTCAACCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAGGATGCTCATGTTTTAAACAACTTCCTTCCTCGAGTTGGTTTGTCAGGAGGGAATTTTCATGGAGTACATAGGTGTTGGGAGGACATATTTGATGCAATTAGCAATGCGAGACACTTGATTTACATAACTGGTTGGTCTGTGTATACAGAAATAACTTTGATAAGAGACCGAGAAAGAAGACAGACAGGAGAGGATATTACTCTGGGGCAACTGCTAAAGAAGAAGGCAGACGAAGGTGTGACTGTTTTGCTTCTTGTTTGGGATGACAGAACTTCTACTGAAGAGTTCAAAAGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGAATACTTCAAGGGCTCGAAGGTACATTGCGTTCTGTGTCCACGGAATCCTGACGTTGGTAGAAGTATCATTCAGGGGTTTGAGACTGCTACAATGTTTACTCATCACCAAAAAACAGTTGTGCTTGATAGTGAAATAGCTGGTGGAGGAACAGAGAAAAGAAGGATCGTGAGTTTTGTTGGTGGTATTGATCTGTGTGATGGGAGATATGATACACCGAAGCACCCTTTGTTTTCAACTCTAGATTCAATCCATTATACCGATTTTCACCAGCCCAACTTTTCAGGCTCTTCAATTAGGAAAGGCGGTCCTCGGGAACCATGGCATGACATCCATTGCTGCCTAGAAGGACCTGTTGCTTGGGATATTTTGTACAATTTTGAGCAAAGATGGCGAAAGCAAGTTGGAAACAACTTGTTGATTCCAATGCAAAAGCTTGAAGAAACCATTACCCGCCCAGTAATGGTTTTACCAGCAGACGACCCTGACACATGGAATGTTCAAATATTTCGGTCTATTGATGGTGGTGCTGTAGTTGGCTTTCCAGAGATACCTGAGGATGCATCCAAAGTAGGCCTTGTAAGTGGGAAGAATAATGTTATAGATAGAAGTATTCAAGATGCTTATATTAATGCTATTCGCCGAGCAAAAAATTTCATATACATTGAGAATCAATATTTCCTTGGAAGCTCTTATGGTTGGAAATCAAATGGTATAAGGGTAGAAGAAATCAATGCTTTGCATCTTATTCCAAAGGAGATCTCACTGAAGATTGTGAGCAAGATCGAAGCTGGAGAGAGATTTACAGCATATATTGTGATTCCAATGTGGCCAGAAGGTATTCCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGGAGAACCTTAGACATGATGTACACAGATATAGCTCAAGCCCTTCGGAAGAAGGGTCTCGATGCAAATCCTAAAGATTACCTGACATTCTTCTGCCTTGGCAATCGAGAGAAGAAGAGAACTGGAGAATATGTACCACCGGAGAAGCCAGAACCCAATTCGGATTATGCTCGGACTCAAGAGCACCGACGTTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCCAACATCAACCAGAGGTCAATGGATGGAGGAAGAGACTCTGAGATTGCAATGGGGGCTTTTCAACCTCATCACTTGGCATCTGGTGAGCCTGCAAGAGGTCAAATCTACGGCTTCAGAGTGGCTCTATGGTACGAGCATCTCGGTCTGTTTGACAAAGCCTTCCATAACCCAGAGAGTGAAGAATGCATCCAATTCGTAAACAAGCTCGCTCTAGAGAACTGGCAATTTTACTCAGACGATACCTTTGATGGCGATCTTCCTGGCCATCTCCTTTCCTACCCCATGGAAGTAGGTCCCAACGGATCGGTTACGGCGCTGCCAAAGTTTGAATTTTTCCCTGACACCAAGGCTCGTGTTCTTGGGCAACTAGCCGAGTATCTACCTCCAATCCTCACCACTTGA 2484 42.59 MEEYPSFPVCSTHFPGKAGILFYFNFVARDKCRAYFMGRFMPKYMESTGFKLDVLFSAGRIKGSKFHNRISMAFDLDKARVGRTRIVDQPYAPEWNDHFRIYCAHTVSHIIFTVKDGGLIGATLIGRAYVPVEDIIKGFVYEKWVEILDEDGKPLYGRSRIHVKLQFSSVNEDRNWSRGIPDPFGGVPFTFFNQRWGCKVSLYQDAHVLNNFLPRVGLSGGNFHGVHRCWEDIFDAISNARHLIYITGWSVYTEITLIRDRERRQTGEDITLGQLLKKKADEGVTVLLLVWDDRTSTEEFKRDGLMATHDQETAEYFKGSKVHCVLCPRNPDVGRSIIQGFETATMFTHHQKTVVLDSEIAGGGTEKRRIVSFVGGIDLCDGRYDTPKHPLFSTLDSIHYTDFHQPNFSGSSIRKGGPREPWHDIHCCLEGPVAWDILYNFEQRWRKQVGNNLLIPMQKLEETITRPVMVLPADDPDTWNVQIFRSIDGGAVVGFPEIPEDASKVGLVSGKNNVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSNGIRVEEINALHLIPKEISLKIVSKIEAGERFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDIAQALRKKGLDANPKDYLTFFCLGNREKKRTGEYVPPEKPEPNSDYARTQEHRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHHLASGEPARGQIYGFRVALWYEHLGLFDKAFHNPESEECIQFVNKLALENWQFYSDDTFDGDLPGHLLSYPMEVGPNGSVTALPKFEFFPDTKARVLGQLAEYLPPILTT 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25622781 25626937 + CePI673135_08g013730.1 Cec08g1373 210015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1373 827 FunFam Phospholipase D delta 220 464 - -
Cec08g1373 827 Pfam Phospholipase D C terminal 745 816 IPR024632 -
Cec08g1373 827 SUPERFAMILY Phospholipase D/nuclease 496 756 - -
Cec08g1373 827 PANTHER PHOSPHOLIPASE D 72 814 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cec08g1373 827 Gene3D Endonuclease Chain A 488 717 - -
Cec08g1373 827 FunFam Phospholipase D 486 719 - -
Cec08g1373 827 SUPERFAMILY Phospholipase D/nuclease 184 461 - -
Cec08g1373 827 Gene3D Endonuclease Chain A 221 469 - -
Cec08g1373 827 SMART C2_3c 65 144 IPR000008 -
Cec08g1373 827 Pfam Phospholipase D Active site motif 346 383 IPR001736 GO:0003824(InterPro)
Cec08g1373 827 Pfam Phospholipase D Active site motif 675 700 IPR001736 GO:0003824(InterPro)
Cec08g1373 827 SMART pld_4 673 700 IPR001736 GO:0003824(InterPro)
Cec08g1373 827 SMART pld_4 345 383 IPR001736 GO:0003824(InterPro)
Cec08g1373 827 Gene3D C2 domain 68 178 IPR035892 -
Cec08g1373 827 PIRSF PLD_plant 39 827 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cec08g1373 827 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 673 700 IPR001736 GO:0003824(InterPro)
Cec08g1373 827 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 345 383 IPR001736 GO:0003824(InterPro)
Cec08g1373 827 Pfam C2 domain 76 146 IPR000008 -
Cec08g1373 827 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 74 170 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1373 Cec-Chr8:25622781 Cec10g0355 Cec-Chr10:4190904 1.20E-196 dispersed
Cec07g1387 Cec-Chr7:29456256 Cec08g1373 Cec-Chr8:25622781 0.00E+00 wgd
Cec08g1373 Cec-Chr8:25622781 Cec09g0278 Cec-Chr9:2409357 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1373 K01115 - csv:101207900 1458.35