Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1373 | ATGGAGGAATATCCGAGTTTTCCTGTTTGTTCGACGCATTTTCCGGGAAAAGCTGGGATCCTCTTCTATTTCAACTTTGTTGCAAGAGACAAATGCCGCGCTTACTTCATGGGACGCTTCATGCCGAAATATATGGAATCGACAGGCTTCAAACTGGATGTCCTATTTTCTGCGGGAAGGATAAAAGGGAGCAAGTTCCACAATAGAATTTCTATGGCCTTTGATCTTGATAAGGCCAGAGTTGGCCGGACGAGGATAGTAGATCAGCCATACGCTCCTGAATGGAACGATCATTTTCGTATATATTGTGCTCATACAGTGTCACATATTATATTCACAGTTAAAGATGGAGGTCTAATCGGTGCAACATTGATTGGAAGAGCTTATGTGCCTGTTGAGGATATCATTAAGGGATTTGTATATGAGAAATGGGTTGAAATATTAGATGAAGACGGTAAGCCTTTATATGGTCGTTCTAGAATCCATGTGAAGTTACAATTTTCAAGTGTTAATGAAGACAGGAACTGGTCCCGAGGAATTCCAGATCCTTTCGGTGGTGTACCTTTCACATTCTTCAACCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAGGATGCTCATGTTTTAAACAACTTCCTTCCTCGAGTTGGTTTGTCAGGAGGGAATTTTCATGGAGTACATAGGTGTTGGGAGGACATATTTGATGCAATTAGCAATGCGAGACACTTGATTTACATAACTGGTTGGTCTGTGTATACAGAAATAACTTTGATAAGAGACCGAGAAAGAAGACAGACAGGAGAGGATATTACTCTGGGGCAACTGCTAAAGAAGAAGGCAGACGAAGGTGTGACTGTTTTGCTTCTTGTTTGGGATGACAGAACTTCTACTGAAGAGTTCAAAAGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGAATACTTCAAGGGCTCGAAGGTACATTGCGTTCTGTGTCCACGGAATCCTGACGTTGGTAGAAGTATCATTCAGGGGTTTGAGACTGCTACAATGTTTACTCATCACCAAAAAACAGTTGTGCTTGATAGTGAAATAGCTGGTGGAGGAACAGAGAAAAGAAGGATCGTGAGTTTTGTTGGTGGTATTGATCTGTGTGATGGGAGATATGATACACCGAAGCACCCTTTGTTTTCAACTCTAGATTCAATCCATTATACCGATTTTCACCAGCCCAACTTTTCAGGCTCTTCAATTAGGAAAGGCGGTCCTCGGGAACCATGGCATGACATCCATTGCTGCCTAGAAGGACCTGTTGCTTGGGATATTTTGTACAATTTTGAGCAAAGATGGCGAAAGCAAGTTGGAAACAACTTGTTGATTCCAATGCAAAAGCTTGAAGAAACCATTACCCGCCCAGTAATGGTTTTACCAGCAGACGACCCTGACACATGGAATGTTCAAATATTTCGGTCTATTGATGGTGGTGCTGTAGTTGGCTTTCCAGAGATACCTGAGGATGCATCCAAAGTAGGCCTTGTAAGTGGGAAGAATAATGTTATAGATAGAAGTATTCAAGATGCTTATATTAATGCTATTCGCCGAGCAAAAAATTTCATATACATTGAGAATCAATATTTCCTTGGAAGCTCTTATGGTTGGAAATCAAATGGTATAAGGGTAGAAGAAATCAATGCTTTGCATCTTATTCCAAAGGAGATCTCACTGAAGATTGTGAGCAAGATCGAAGCTGGAGAGAGATTTACAGCATATATTGTGATTCCAATGTGGCCAGAAGGTATTCCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGGAGAACCTTAGACATGATGTACACAGATATAGCTCAAGCCCTTCGGAAGAAGGGTCTCGATGCAAATCCTAAAGATTACCTGACATTCTTCTGCCTTGGCAATCGAGAGAAGAAGAGAACTGGAGAATATGTACCACCGGAGAAGCCAGAACCCAATTCGGATTATGCTCGGACTCAAGAGCACCGACGTTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCCAACATCAACCAGAGGTCAATGGATGGAGGAAGAGACTCTGAGATTGCAATGGGGGCTTTTCAACCTCATCACTTGGCATCTGGTGAGCCTGCAAGAGGTCAAATCTACGGCTTCAGAGTGGCTCTATGGTACGAGCATCTCGGTCTGTTTGACAAAGCCTTCCATAACCCAGAGAGTGAAGAATGCATCCAATTCGTAAACAAGCTCGCTCTAGAGAACTGGCAATTTTACTCAGACGATACCTTTGATGGCGATCTTCCTGGCCATCTCCTTTCCTACCCCATGGAAGTAGGTCCCAACGGATCGGTTACGGCGCTGCCAAAGTTTGAATTTTTCCCTGACACCAAGGCTCGTGTTCTTGGGCAACTAGCCGAGTATCTACCTCCAATCCTCACCACTTGA | 2484 | 42.59 | MEEYPSFPVCSTHFPGKAGILFYFNFVARDKCRAYFMGRFMPKYMESTGFKLDVLFSAGRIKGSKFHNRISMAFDLDKARVGRTRIVDQPYAPEWNDHFRIYCAHTVSHIIFTVKDGGLIGATLIGRAYVPVEDIIKGFVYEKWVEILDEDGKPLYGRSRIHVKLQFSSVNEDRNWSRGIPDPFGGVPFTFFNQRWGCKVSLYQDAHVLNNFLPRVGLSGGNFHGVHRCWEDIFDAISNARHLIYITGWSVYTEITLIRDRERRQTGEDITLGQLLKKKADEGVTVLLLVWDDRTSTEEFKRDGLMATHDQETAEYFKGSKVHCVLCPRNPDVGRSIIQGFETATMFTHHQKTVVLDSEIAGGGTEKRRIVSFVGGIDLCDGRYDTPKHPLFSTLDSIHYTDFHQPNFSGSSIRKGGPREPWHDIHCCLEGPVAWDILYNFEQRWRKQVGNNLLIPMQKLEETITRPVMVLPADDPDTWNVQIFRSIDGGAVVGFPEIPEDASKVGLVSGKNNVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSNGIRVEEINALHLIPKEISLKIVSKIEAGERFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDIAQALRKKGLDANPKDYLTFFCLGNREKKRTGEYVPPEKPEPNSDYARTQEHRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHHLASGEPARGQIYGFRVALWYEHLGLFDKAFHNPESEECIQFVNKLALENWQFYSDDTFDGDLPGHLLSYPMEVGPNGSVTALPKFEFFPDTKARVLGQLAEYLPPILTT | 827 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 25622781 | 25626937 | + | CePI673135_08g013730.1 | Cec08g1373 | 210015 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1373 | 827 | FunFam | Phospholipase D delta | 220 | 464 | - | - | |
Cec08g1373 | 827 | Pfam | Phospholipase D C terminal | 745 | 816 | IPR024632 | - | |
Cec08g1373 | 827 | SUPERFAMILY | Phospholipase D/nuclease | 496 | 756 | - | - | |
Cec08g1373 | 827 | PANTHER | PHOSPHOLIPASE D | 72 | 814 | IPR015679 | GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER) | |
Cec08g1373 | 827 | Gene3D | Endonuclease Chain A | 488 | 717 | - | - | |
Cec08g1373 | 827 | FunFam | Phospholipase D | 486 | 719 | - | - | |
Cec08g1373 | 827 | SUPERFAMILY | Phospholipase D/nuclease | 184 | 461 | - | - | |
Cec08g1373 | 827 | Gene3D | Endonuclease Chain A | 221 | 469 | - | - | |
Cec08g1373 | 827 | SMART | C2_3c | 65 | 144 | IPR000008 | - | |
Cec08g1373 | 827 | Pfam | Phospholipase D Active site motif | 346 | 383 | IPR001736 | GO:0003824(InterPro) | |
Cec08g1373 | 827 | Pfam | Phospholipase D Active site motif | 675 | 700 | IPR001736 | GO:0003824(InterPro) | |
Cec08g1373 | 827 | SMART | pld_4 | 673 | 700 | IPR001736 | GO:0003824(InterPro) | |
Cec08g1373 | 827 | SMART | pld_4 | 345 | 383 | IPR001736 | GO:0003824(InterPro) | |
Cec08g1373 | 827 | Gene3D | C2 domain | 68 | 178 | IPR035892 | - | |
Cec08g1373 | 827 | PIRSF | PLD_plant | 39 | 827 | IPR011402 | GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro) | |
Cec08g1373 | 827 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 673 | 700 | IPR001736 | GO:0003824(InterPro) | |
Cec08g1373 | 827 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 345 | 383 | IPR001736 | GO:0003824(InterPro) | |
Cec08g1373 | 827 | Pfam | C2 domain | 76 | 146 | IPR000008 | - | |
Cec08g1373 | 827 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 74 | 170 | IPR035892 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1373 | Cec-Chr8:25622781 | Cec10g0355 | Cec-Chr10:4190904 | 1.20E-196 | dispersed | |
Cec07g1387 | Cec-Chr7:29456256 | Cec08g1373 | Cec-Chr8:25622781 | 0.00E+00 | wgd | |
Cec08g1373 | Cec-Chr8:25622781 | Cec09g0278 | Cec-Chr9:2409357 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1373 | K01115 | - | csv:101207900 | 1458.35 |