Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1417 ATGGCAGGTTTCTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTAGAGAGATATTGGTCGGAGGCAAATCCGACGCCTGGAAAATTCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAGCCTCCCGCTTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGGTTACGAAGCCTGCAATACCGAAAGCCCAGAACAGAGATTTGAGGATGGGAATACGAAAGTTGAGCTACAGAGACCAGGGCCATTTTATTTCATCAGTGGGGCAAAGGGCCATTGCGAGCAGGGCCAGAAGCTAATCGTTGTGGTTGTGACTCCTCGCCGCAGGTTCATCGGCATCTCTCCGGCGCCTTCTCCCGCGGAGAGTGAGGGTCCGGCGGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGACTTTTGGCGGTGATCGTCGGAATTTTGGGTGTTGGAGTTGGTTTGTTGTGA 531 51.41 MAGFSRALFLLTFLLFSFSEAREILVGGKSDAWKIPSSQSQSLNQWAEASRFRIGDTLVWNYEEGKDSVLKVRKEGYEACNTESPEQRFEDGNTKVELQRPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISPAPSPAESEGPAVAPSSGAANLKVGLLAVIVGILGVGVGLL 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26008340 26008949 + CePI673135_08g014170.1 Cec08g1417 210059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1417 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Cec08g1417 176 Gene3D - 20 128 IPR008972 -
Cec08g1417 176 PANTHER BLUE COPPER PROTEIN 16 136 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cec08g1417 176 CDD OsENODL1_like 22 124 IPR041846 -
Cec08g1417 176 FunFam Early nodulin-like protein 1 21 129 - -
Cec08g1417 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055(InterPro)
Cec08g1417 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1638 Cec-Chr5:26317094 Cec08g1417 Cec-Chr8:26008340 1.60E-24 dispersed
Cec08g1417 Cec-Chr8:26008340 Cec09g2063 Cec-Chr9:37674639 1.20E-18 dispersed
Cec08g1417 Cec-Chr8:26008340 Cec10g0536 Cec-Chr10:6477722 6.50E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1417 - - - 0.0