Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1417 | ATGGCAGGTTTCTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTAGAGAGATATTGGTCGGAGGCAAATCCGACGCCTGGAAAATTCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAGCCTCCCGCTTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGGTTACGAAGCCTGCAATACCGAAAGCCCAGAACAGAGATTTGAGGATGGGAATACGAAAGTTGAGCTACAGAGACCAGGGCCATTTTATTTCATCAGTGGGGCAAAGGGCCATTGCGAGCAGGGCCAGAAGCTAATCGTTGTGGTTGTGACTCCTCGCCGCAGGTTCATCGGCATCTCTCCGGCGCCTTCTCCCGCGGAGAGTGAGGGTCCGGCGGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGACTTTTGGCGGTGATCGTCGGAATTTTGGGTGTTGGAGTTGGTTTGTTGTGA | 531 | 51.41 | MAGFSRALFLLTFLLFSFSEAREILVGGKSDAWKIPSSQSQSLNQWAEASRFRIGDTLVWNYEEGKDSVLKVRKEGYEACNTESPEQRFEDGNTKVELQRPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISPAPSPAESEGPAVAPSSGAANLKVGLLAVIVGILGVGVGLL | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 26008340 | 26008949 | + | CePI673135_08g014170.1 | Cec08g1417 | 210059 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1417 | 176 | SUPERFAMILY | Cupredoxins | 21 | 125 | IPR008972 | - | |
Cec08g1417 | 176 | Gene3D | - | 20 | 128 | IPR008972 | - | |
Cec08g1417 | 176 | PANTHER | BLUE COPPER PROTEIN | 16 | 136 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Cec08g1417 | 176 | CDD | OsENODL1_like | 22 | 124 | IPR041846 | - | |
Cec08g1417 | 176 | FunFam | Early nodulin-like protein 1 | 21 | 129 | - | - | |
Cec08g1417 | 176 | Pfam | Plastocyanin-like domain | 33 | 118 | IPR003245 | GO:0009055(InterPro) | |
Cec08g1417 | 176 | ProSiteProfiles | Phytocyanin domain profile. | 22 | 126 | IPR003245 | GO:0009055(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g1638 | Cec-Chr5:26317094 | Cec08g1417 | Cec-Chr8:26008340 | 1.60E-24 | dispersed | |
Cec08g1417 | Cec-Chr8:26008340 | Cec09g2063 | Cec-Chr9:37674639 | 1.20E-18 | dispersed | |
Cec08g1417 | Cec-Chr8:26008340 | Cec10g0536 | Cec-Chr10:6477722 | 6.50E-28 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1417 | - | - | - | 0.0 |