Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1418 ATGGACAATGGATCTCTCGGTGAAGCTCCAAGAATGGGGAAAGAACCAAATTCCGATCCATCCAACAACAACAGCAAACTCATCTCGATCATGTCACAGCCATTCCGGTGGCTTAAAATGCTCTCATCAGAGCTAAATCCGAGTTTCATCGCCGGTGTGATCCTCGTCTACGGCTTAAGCCACGGCTTCTCCAGCTCCTATTTCAAAGTCGTCTCGGATTACTATTGGAAAGACGTGCAGAAGCTACAGCCGTCGGTAGTTCAGATCTACATCGGGATTTACGCGATTCCATGGGTGATGAAGCCGATTTGGGGGCTATTGACGGACGCGTTTCCAGTGAGAGGTTACTTGCGGCGGCCGTATTTCGTGATAGCGGGAGTGGTGGGAGCGACGTCGGCGGTGGCGGTGGCGGTGGCGGTGAAAGGGGAATTGGGGGTTTTGGAAGCATTAGGGCTTTTGATTGGGATTTCAGGGGCGATGGCGATTGCGGATGTGACGATTGATGCTTGCATTGTGAGAAATAGCATTGAAGTTCAGTGGTTAGCGCAAGATTTGCAAAGCCTTTGTGGAGCTTGTTCTTCGATTGGGCATTTGATTGGATACTCCACCAGTGGCGTTTTTGTTCATCTTCTCGGCGCTCAGGAGGCACTTGCAATATTGGCAATTCCACCGGCCATGATAATATTGTTGGGCTTCTTCATGCATGAGACACCATCCACCACCCTCCAATATAATGGGAAGTCCAAGGCAGGATCTATAAAGCAAGTGGGAGTGGCCATGAGAGACACGTGCAAAGCCATCAAATATCCGCACGTGTGGAAGCCTTCCCTTTTCATGTTCCTTTGTCTTTCTCTCAGCATAAGTACTCACGAGGGGCAGTTCTATTGGTACACAGACAAGAAAGCCGGTCCCGCCTTCTCTCAGGAATCGGTAGGGCTCATTTACGCAATCGGCTCAGCGGCGTCACTAATCGGAGTACTAATTTACCACAAAACCCTCCGAGACTTAAAATTCCGACGAATCCTCTTCTTCGCTCAAATCTTCTACAGCGTCGCCGGATTTCTCGACGTCATCTTCGTCCTGCGGTGGAATTTAGCCCTAAAAATCCCGGATCAGTTATTCGTGGTATTGGAAGAGTGCGTTACTCGAATCGTGGCGCGAATCCGGTGGACGCCGATGATGGTTCTGAACACTCGACTCTGTTCCGTGGGGATCGAAGGGACATTCTTCGCATTATTGGCTTGTATTGATAGCCTGGGGACGTTGTGCTCGAAATGGAGCGGCGGATTGGTTCTACATGCGTTTGGAGTAACGAGGAGCGATTTTAGGAACTTGTGGTTGGTGGTTCTGCTTCGGACTGTGTTGAGATTTGTGGTTGTGGCGTTCGTTTTTCTCGTTCCTGATGCGAGTCAATCGGATATTTTGGTTCCATCTGATCAGACGATGATTAGTAAGATTTCTTGTTCGACGGCTGTGAAGGAAGATGGCGATTGCATTCCTCTTGTCTCCATGAAAGGCGAGGGGCGAGATGTGACTACTTATAAGGCATTCCCTCTGACACTTACTTGGGATAAGTCTGAGGTTCGCTACCGCCTCTCCATGGCTAACAGGCACACCATCCTTCTTATGCAAACATCACACAACAGGGCAACTAGGACTTTTATGGATTATGATTCAATAAGTCAAGCTATGGATGGTATATGTGGGCTATATGAAAGGAAGCTTAAGGACTTAAATCCAGCCATCAGAAATATCACTTATGATATTGCAGATCTCTACAATTTCATTGATGGACTTGCTGATATGAGTGCACTAGTATTCGAACATTCAATTCAGGCTTATTTGCCTTATGATCGGCAGTGGATTAAACAGAGGATATTTCAACATCTGAAGAAACTGGCACATTGA 1908 47.75 MDNGSLGEAPRMGKEPNSDPSNNNSKLISIMSQPFRWLKMLSSELNPSFIAGVILVYGLSHGFSSSYFKVVSDYYWKDVQKLQPSVVQIYIGIYAIPWVMKPIWGLLTDAFPVRGYLRRPYFVIAGVVGATSAVAVAVAVKGELGVLEALGLLIGISGAMAIADVTIDACIVRNSIEVQWLAQDLQSLCGACSSIGHLIGYSTSGVFVHLLGAQEALAILAIPPAMIILLGFFMHETPSTTLQYNGKSKAGSIKQVGVAMRDTCKAIKYPHVWKPSLFMFLCLSLSISTHEGQFYWYTDKKAGPAFSQESVGLIYAIGSAASLIGVLIYHKTLRDLKFRRILFFAQIFYSVAGFLDVIFVLRWNLALKIPDQLFVVLEECVTRIVARIRWTPMMVLNTRLCSVGIEGTFFALLACIDSLGTLCSKWSGGLVLHAFGVTRSDFRNLWLVVLLRTVLRFVVVAFVFLVPDASQSDILVPSDQTMISKISCSTAVKEDGDCIPLVSMKGEGRDVTTYKAFPLTLTWDKSEVRYRLSMANRHTILLMQTSHNRATRTFMDYDSISQAMDGICGLYERKLKDLNPAIRNITYDIADLYNFIDGLADMSALVFEHSIQAYLPYDRQWIKQRIFQHLKKLAH 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26010238 26024975 + CePI673135_08g014180.1 Cec08g1418 210060

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1418 635 CDD MFS_FBT 52 453 - -
Cec08g1418 635 Pfam BT1 family 62 474 IPR039309 -
Cec08g1418 635 Gene3D Enhancer of rudimentary 536 635 IPR035912 -
Cec08g1418 635 Gene3D MFS general substrate transporter like domains 48 467 IPR036259 -
Cec08g1418 635 Pfam Enhancer of rudimentary 537 633 IPR000781 -
Cec08g1418 635 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 37 473 IPR039309 -
Cec08g1418 635 SUPERFAMILY ERH-like 537 634 IPR035912 -
Cec08g1418 635 SUPERFAMILY MFS general substrate transporter 52 464 IPR036259 -
Cec08g1418 635 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1418 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0594 Cec-Chr5:4850499 Cec08g1418 Cec-Chr8:26010238 5.40E-41 dispersed
Cec06g0635 Cec-Chr6:7112091 Cec08g1418 Cec-Chr8:26010238 1.70E-41 dispersed
Cec08g1418 Cec-Chr8:26010238 Cec08g1420 Cec-Chr8:26043755 1.90E-109 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g593 . . . . . . . . Cmo05g00349 Cmo12g00320 . Cma05g00345 . . Sed11g1137 . . Bhi04g00056 Tan02g2769 Cmetu03g0116 . Hepe10g0212 . . . . . . . . . Cone4ag1739 Cone7ag1659 . . . . . Cme03g01571 Blo17g00001 . . . . . . Bma02g00005 . . . . Cma12g00367 . Car05g00291 . . . . . . . . . Cla08g01371 Cam08g1840 Cec08g1418 Cco08g1551 Clacu08g1535 . Cre08g1318 Lsi08g01253 . Chy03g01079 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012952 0 1 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 1 28