Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1431 ATGGCTTCCAAGCTTTGCGACTCCTGTAAGTCGGCCAACGCCACTCTCTTCTGCCGAGCTGACTCTGCCTTCCTTTGCCTTGGCTGTGACTCCAAGGTTCACGCCGCCAACAAACTCGCCTCTCGCCATGCTCGCGTTTGGGTCTGTGAAGTTTGCGAGCAAGCTCCTGCTCATGTAACCTGCAAGGCTGACGCCGCCGCTCTCTGCCTCACCTGCGACCACGATATTCACTCTGCTAATCCCCTCGCTCGCCGTCACGAGCGAGTTCCCGTCACGCCTTTCTACGACCCCTCCAACTCCGACAACTCACTCGCCGTTAAACCTAGCGCTGCAATCAACTTCCTCGATGACCGTTACTTCTCCGATGTCGGCGGTGATGCCGCTGATGTTAGTAGAGAAGAAGCCGAGGCTGCTTCCTGGCTTCTTCCGAACCCTAACCCTAAGGCAATCGAAAGTTCAGATCTGAACTCAGGGAAGTTTGAGTTTCCAGAAATGGATCCTTACCTAGATCTGGATTACGGCCATGTAGATCCGAAATTGGAAGCGCAAGAGCAAAACAGCTCCGGCGCCGATGGAGTTGTTCCGGTTCAGAGCAAAGGCGTTAATCTCTCATCCGTAAACGATCGCTGCTTCGGCATAGATTTCCCCAGCACCAAATCGTTCCCGTACGGTTACAATCCTCAGTCAATCAGTCACAGTGTATCATCCTCTTCGATTGAGGTTGGAGTTGTGCCGGATGGGAACGCGATGACGGATGTATCAAATCCGTACACGAAACCGTCGACGGAATCGACGGTTCAACCGCTGCAAATCTCGCCGGCGGATCGGGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAATTCGAAAAGACGATCCGATACGCATCTCGTAAGGCTTACGCCGAGACGAGACCTCGAATCAAAGGACGGTTCGCCAAACGGACGGACATCGAACTTGATGTTGACAGAGTGAGTGGATACGGCGTCGTTCCGTCCTTCTAA 1014 53.45 MASKLCDSCKSANATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDPSNSDNSLAVKPSAAINFLDDRYFSDVGGDAADVSREEAEAASWLLPNPNPKAIESSDLNSGKFEFPEMDPYLDLDYGHVDPKLEAQEQNSSGADGVVPVQSKGVNLSSVNDRCFGIDFPSTKSFPYGYNPQSISHSVSSSSIEVGVVPDGNAMTDVSNPYTKPSTESTVQPLQISPADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26111922 26113050 - CePI673135_08g014310.1 Cec08g1431 210073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1431 337 CDD Bbox1_BBX-like 48 91 IPR049808 -
Cec08g1431 337 CDD Bbox1_BBX-like 5 48 IPR049808 -
Cec08g1431 337 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270(InterPro)
Cec08g1431 337 SMART bboxneu5 1 48 IPR000315 GO:0008270(InterPro)
Cec08g1431 337 SMART bboxneu5 49 91 IPR000315 GO:0008270(InterPro)
Cec08g1431 337 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270(InterPro)
Cec08g1431 337 ProSiteProfiles CCT domain profile. 276 318 IPR010402 GO:0005515(InterPro)
Cec08g1431 337 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 4 320 IPR045281 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0009909(InterPro)|GO:0009909(PANTHER)
Cec08g1431 337 Pfam B-box zinc finger 46 91 IPR000315 GO:0008270(InterPro)
Cec08g1431 337 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270(InterPro)
Cec08g1431 337 Pfam CCT motif 276 318 IPR010402 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0753 Cec-Chr6:8788241 Cec08g1431 Cec-Chr8:26111922 5.10E-07 dispersed
Cec07g1647 Cec-Chr7:32048955 Cec08g1431 Cec-Chr8:26111922 1.80E-06 dispersed
Cec07g1735 Cec-Chr7:32910918 Cec08g1431 Cec-Chr8:26111922 2.50E-29 dispersed
Cec08g1431 Cec-Chr8:26111922 Cec11g1272 Cec-Chr11:26687121 1.20E-41 dispersed
Cec08g1431 Cec-Chr8:26111922 Cec06g1497 Cec-Chr6:28540475 2.10E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30097 PF00643 zf-B_box 3.60E-06 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1431 - - - 0.0