Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1449 ATGAACGGTCATGATGCGGAGCCGTTGGTGTACGTTCACGGCGACCTCGATTTGAAGATCATTGAGGCGCGCCGTTTGCCTAATATGGATTTGCTAACGGAACGTATTCGGCGGTTTTTTACTGTTTTTACTTCTTGTCGGAAACCGTTTTCCAAGAAGAAGGATAAGGATGATCATCAGCACCACCGGAAGATTATTACTAGTGATCCTTACGTCACTGTTTGTCTTGCTGGAGCGACGGTTGCTCGGACGCGAGTTATTTCGAACTCGCAGAACCCTGTCTGGAATGAGCACTTCAAAATCCCTCTTGCTCATCCGGTCTCGCAGGTGGAGTTTCATGTCAAGGATAACGATGTGTTTGGTGCGGATTTGATTGGTATTGCAACGGTCCCTGCGCGCAGAGTTCTTTCTGGCGAAACCATAGATGATTGGTTTCCGATTATCGGTTCGTTCGGGAAACCGCCGAAGCCGGATTCGGCTGTGCGTTTGGAAATGAAATTCACCAAGTGCGAGGACAATCCTCTGTACCGTTATGGCATTGCGGCCGATCCCGAACATTTTGGCGTTCGGAATTGTTATTTTCCGGTACGGCATGGAGGTTCGGTAACGCTTTATCAGGACGCCCACGTTCCTGATTCCATGTTGGAGAAGATTGAATTGGAAAAGGGGAATGTGTATCAGCATGAGAATTGCTGGGAGGATATATGCCATGCAATTTTGGAGGCTCACCATTTAGTCTACATCGCCGGTTGGTCCATATATCATAAGGTGAAGCTGGTGAGAGAGCCTTCAAAGCCGTTGCCTAATGGTGGCAATTTGAACCTGGGAGAGTTGCTCAAGTACAAGTCACAGGAAGGTGTGCGAGTCTTGTTATTGGTTTGGGATGACAAGACTTCCCACAGCAAATTCTTCATTAATACGACTGGAGTGATGCAGACTCATGATGAGGAGACCCGGAAGTTTTTCAAGCACTCTTCTGTATCATGTGTGCTGTCACCCCGATATGCCAGCAGTTGTTGGAACGCTTTTCACCCATCACCAGAAATAAGTTCTTTTATTGGAGGACTTGACCTTTGCGATGGTCGTTATGATACTCCTGAGCATCGGTTGTTAAAAGATCTTGACACTGTATTTGAGGATGATTATCACAATCCAACTTTTTCTGGAGGTACAAAGGGTCCTCGGCAGCCATGGCATGATTTACATTGCAAAATTGAAGGGCCTGCGGCATATGATGTGCTCACTAACTTTGAACAACGATGGCGAAAAGCCACAAAATGGTCCGAATTAGGTCAGCGGTTCAAAAGAGTATCGCATTGGCATGAAGATGCTTTAATAAAGTTGGAACGCATATCTTGGATACTTAGTCCATCTCAGTCAGTCCCCAACGATGATCCTTTGTTATGGGTTTCCAAGGAAAATGATCCTGGCAATTGGCATGTTCAGGTTTTCCGGTCCATAGATTCAGGATCTTTGAAAGGATTTCCCAAAGATGTTTTTCAAGCTGAGTTGCAGAATCTGGTTTGTGCAAAAAATTTGGTTATTGACAAAAGCATTCAAACAGCATATATTCAAGCAATAAGATCTGCCCAACACTTCATATACATTGAGAATCAGTATTTTCTTGGATCGTCATTTGCGTGGCCTTCGTACAAAGAAGCAGGTGCTGATAATCTTATTCCTATGGAATTGGCGTTGAAGATTGCTAGTAAGATAAGAGCGAATGAGAGGTTTGCTGTCTACGTTGTGATACCAATGTGGCCTGAAGGGGTTCCCACTTCTGTTTCTGTGCAAGAAATCCTATTTTGGCAGGGTCAGACAATCCAAATGATGTATGAAGTCATTGGAAGAGAGTTGAAATATAAGAATCTTGAGAACGCTCATCCCTCAGACTACCTGAACTTTTTCTGTCTTGGAAATAGGGAACCGCACGAGGACTTGACATGTTCCTCTGGTCATTCTTCCAAGAGCGAAGATGTGGTTCCAGACTCACAAAAGTTCCGTAGATTCATGATATATGTGCATGCGAAAGGAATGATTGTTGATGATGAGTATGTAATAATAGGGTCTGCAAATATAAATCAAAGATCAATGGCTGGTTCAAGGGACACTGAGATTGCCATGGGCGCATATCAACCCAGTTACACATGGGGTAAGAAGAAACGACATCCACAAGGCCAGGTTTATGGCTATAGAATGTCGCTCTGGGCTGAACATTTGGGAAACATTGACTATTGCTTCAAGGAGCCCGAAAGTTTGACTTGTGTGAAGGCAGTCAACAAGATAGCTGAAGATAACTGGAAGAAATACACCGCAACGGAATTTGTGCCATTGCAAGGGCACCTCCTTAAGTACCCGATCGAGGTCAGCCAAAGTGGGAAGATAGGTCCATTGACTGGACACGAGACTTTCCCTGACTTTGGTGGTAAGGTCCTTGGAGCTCGATCTAACCTCCCTGATGCTCTTACCACATAA 2475 44.81 MNGHDAEPLVYVHGDLDLKIIEARRLPNMDLLTERIRRFFTVFTSCRKPFSKKKDKDDHQHHRKIITSDPYVTVCLAGATVARTRVISNSQNPVWNEHFKIPLAHPVSQVEFHVKDNDVFGADLIGIATVPARRVLSGETIDDWFPIIGSFGKPPKPDSAVRLEMKFTKCEDNPLYRYGIAADPEHFGVRNCYFPVRHGGSVTLYQDAHVPDSMLEKIELEKGNVYQHENCWEDICHAILEAHHLVYIAGWSIYHKVKLVREPSKPLPNGGNLNLGELLKYKSQEGVRVLLLVWDDKTSHSKFFINTTGVMQTHDEETRKFFKHSSVSCVLSPRYASSCWNAFHPSPEISSFIGGLDLCDGRYDTPEHRLLKDLDTVFEDDYHNPTFSGGTKGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSELGQRFKRVSHWHEDALIKLERISWILSPSQSVPNDDPLLWVSKENDPGNWHVQVFRSIDSGSLKGFPKDVFQAELQNLVCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSFAWPSYKEAGADNLIPMELALKIASKIRANERFAVYVVIPMWPEGVPTSVSVQEILFWQGQTIQMMYEVIGRELKYKNLENAHPSDYLNFFCLGNREPHEDLTCSSGHSSKSEDVVPDSQKFRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGSRDTEIAMGAYQPSYTWGKKKRHPQGQVYGYRMSLWAEHLGNIDYCFKEPESLTCVKAVNKIAEDNWKKYTATEFVPLQGHLLKYPIEVSQSGKIGPLTGHETFPDFGGKVLGARSNLPDALTT 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26250352 26255645 - CePI673135_08g014490.1 Cec08g1449 210091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1449 824 SUPERFAMILY Phospholipase D/nuclease 231 433 - -
Cec08g1449 824 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 169 IPR035892 -
Cec08g1449 824 PANTHER PHOSPHOLIPASE D 11 812 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cec08g1449 824 Gene3D Endonuclease Chain A 348 445 - -
Cec08g1449 824 Pfam Phospholipase D C terminal 745 814 IPR024632 -
Cec08g1449 824 SMART pld_4 670 697 IPR001736 GO:0003824(InterPro)
Cec08g1449 824 SMART C2_3c 15 144 IPR000008 -
Cec08g1449 824 SUPERFAMILY Phospholipase D/nuclease 516 746 - -
Cec08g1449 824 CDD C2_plant_PLD 10 168 - -
Cec08g1449 824 Pfam Phospholipase D Active site motif 672 697 IPR001736 GO:0003824(InterPro)
Cec08g1449 824 Pfam C2 domain 15 146 IPR000008 -
Cec08g1449 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 670 697 IPR001736 GO:0003824(InterPro)
Cec08g1449 824 Gene3D C2 domain 12 175 IPR035892 -
Cec08g1449 824 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Cec08g1449 824 PIRSF PLD_plant 341 824 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cec08g1449 824 PIRSF PLD_plant 1 346 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cec08g1449 824 Gene3D Endonuclease Chain A 498 716 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0492 Cec-Chr6:5527441 Cec08g1449 Cec-Chr8:26250352 1.80E-36 dispersed
Cec08g1449 Cec-Chr8:26250352 Cec10g0355 Cec-Chr10:4190904 9.90E-236 dispersed
Cec04g1771 Cec-Chr4:36650608 Cec08g1449 Cec-Chr8:26250352 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1449 K01115 - csv:101213442 1596.25