Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1461 ATGTCTAATAATCTCATCTTCACCTTTATTCTCCTTTTTCCCTCCCTTCTTCCCTCTTTCAATGCCTTGAGCCATCGTTACTATGACCACACATGCCCTAATCTCGAGTCCATTGTTGCCCGAGAAGTCCACTTAGCCACTGCCAACGACAAGACCGTCCCTCCTGCATTGCTTCGAATGCACTTCCATGATTGTTTCATCAGAGGTTGTGATGGCTCTGTGCTCTTGGACTCCAAGGGGAAGAACACAGCTGAAAAAGATGGCCCTCCCAACATATCCCTCCATGCTTTTTATGTCATTGACAATGCCAAGAAAGCCATTGAATCTACCTGCCCTGGCGTCGTTTCTTGCGCTGATATCTTAGCCCTTGCTGCTCGAGATGCCGTTGTCTTGTCTGGAGGTCCTCATTGGGAAGTCCCAAAAGGAAGAAAAGATGGAAGAATCTCAAAAGCTATTGAAACTAGACAATTACCAGCTCCCACATTCAACTTCTCTCAGCTCCAACAAAGCTTCTCCCAAAGGGGCCTTTCTTTACAAGATCTTGTTGCTCTTTCAGGCGGCCACACTCTTGGATTCGCTCATTGCTCGTCGTTCCAAAACCGAATCCACAACTTCAACTCGAGCCTCGACGTCGACCCGTCATTGCAGCCGGCATTTGCAGCCAGCCTCCGGAGCATATGTCCGGCGAGAAACAAGGTGAAAAATGCGGGTTCGGCCATGGATTCAACTTCCACAGTATTTGACAATGTATATTTCAAGCTTCTTCTACAAGGGCGGAGCATTTTTTCATCAGATCAATCTTTGCTTTCAAATCCCAAAACAAAAGCTTTGGTTTCAAGATTTGCGAATGAACAACATCTCTTTGAGAAGGCTTTTGTGAAGTCAATGGTGAAGATGAGTCAGATCGCCGGCGCCGGCCATGAAGTCCGGCTAAACTGCAGGGTGGTCAGATGA 954 47.17 MSNNLIFTFILLFPSLLPSFNALSHRYYDHTCPNLESIVAREVHLATANDKTVPPALLRMHFHDCFIRGCDGSVLLDSKGKNTAEKDGPPNISLHAFYVIDNAKKAIESTCPGVVSCADILALAARDAVVLSGGPHWEVPKGRKDGRISKAIETRQLPAPTFNFSQLQQSFSQRGLSLQDLVALSGGHTLGFAHCSSFQNRIHNFNSSLDVDPSLQPAFAASLRSICPARNKVKNAGSAMDSTSTVFDNVYFKLLLQGRSIFSSDQSLLSNPKTKALVSRFANEQHLFEKAFVKSMVKMSQIAGAGHEVRLNCRVVR 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26365917 26367207 - CePI673135_08g014610.1 Cec08g1461 210103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1461 317 FunFam Peroxidase 158 299 - -
Cec08g1461 317 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 Pfam Peroxidase 40 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec08g1461 317 Gene3D Peroxidase, domain 2 158 299 - -
Cec08g1461 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cec08g1461 317 PANTHER PEROXIDASE 25-RELATED 24 313 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cec08g1461 317 ProSiteProfiles Plant heme peroxidase family profile. 22 317 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec08g1461 317 FunFam Peroxidase 26 163 - -
Cec08g1461 317 Gene3D - 26 316 - -
Cec08g1461 317 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1461 Cec-Chr8:26365917 Cec09g1656 Cec-Chr9:30236934 1.70E-66 dispersed
Cec04g0383 Cec-Chr4:14957870 Cec08g1461 Cec-Chr8:26365917 1.70E-71 transposed
Cec04g1759 Cec-Chr4:36569490 Cec08g1461 Cec-Chr8:26365917 2.50E-118 transposed
Cec05g0928 Cec-Chr5:8107096 Cec08g1461 Cec-Chr8:26365917 5.70E-99 transposed
Cec05g1778 Cec-Chr5:29663949 Cec08g1461 Cec-Chr8:26365917 4.40E-62 transposed
Cec04g1748 Cec-Chr4:36491517 Cec08g1461 Cec-Chr8:26365917 2.00E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1461 K00430 - csv:101214403 557.755