Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1473 ATGGCGGCGGACGGATTTCAATTTCTATTGGGGCTCTTAAGTCTGCTGCTTTTGGTACCAGGTGGGTTTTCGACGAGCTTTACTTTTGTGAACAAATGTGGATTCACGGTTTGGCCGGGGGTTCTGTCGAACGGTGGCGTTCCACCGCTTCCCACTACTGGCTTCTCTCTTCAGACTGGAGAGTCCAAGACACTACCGGCGCCGGCGTCTTGGGGCGGGCGTTTCTGGGGGCGAACACTCTGCTCTGAAGATTCCACCGGGAAATTCTCCTGCGCTACTGGCGACTGTGGCTTTAACAAACTAGAGTGTGCTGGAAACGGAGCAACGCCACCGGCGACTCTCGCGGAGTTCACTCTCGACGGCTCCGGCGGGCTTGATTTCTTCGACGTTAGTCTGGTGGACGGTTACAATCTTCCGATGATTGTGGTGCCTCAGGGTGGTTCCGGCGACAACTGCACGAGCACCGGCTGCGTGGTGGATCTGAACGGCGCGTGCCCATCAGAGCTGCGCGTGACGAGTGCCGACGGAAGAGAAGGCGTCGCGTGTAAAAGCGCGTGTGATGCCTTCAATCAACCGCAGTATTGTTGCACAGGCGCGTACCAAACACCGGATACTTGTCAGCCATCGATGTACTCTCAGATCTTCAAGAGAGCGTGCCCACGCGCTTACAGCTACGCGTACGATGATAAGACGAGTACTTTCACATGCGCCGGTGCTGATTACGTCATCACCTTCTGTCCATCGCCAAACACCAGCCAAAAGTCATCGGAGGCACAGAATTCACCTGCGACGGCGAACCCATCTTCCGGCGGCGATGGTGCGATGGTGTACGAAGGTGCATCCCTAATTCAAACCGACTCAGCGCCGCCGCGCTTAGCCGGGATTTCAGCGGTCAGTGCGGTGGCGATTTGGTGGTTGTGGCAGCAGCTGTTCTTCTACTTCTGA 945 56.51 MAADGFQFLLGLLSLLLLVPGGFSTSFTFVNKCGFTVWPGVLSNGGVPPLPTTGFSLQTGESKTLPAPASWGGRFWGRTLCSEDSTGKFSCATGDCGFNKLECAGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNLPMIVVPQGGSGDNCTSTGCVVDLNGACPSELRVTSADGREGVACKSACDAFNQPQYCCTGAYQTPDTCQPSMYSQIFKRACPRAYSYAYDDKTSTFTCAGADYVITFCPSPNTSQKSSEAQNSPATANPSSGGDGAMVYEGASLIQTDSAPPRLAGISAVSAVAIWWLWQQLFFYF 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26469886 26471278 - CePI673135_08g014730.1 Cec08g1473 210115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1473 314 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Cec08g1473 314 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Cec08g1473 314 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Cec08g1473 314 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Cec08g1473 314 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Cec08g1473 314 Pfam Thaumatin family 31 247 IPR001938 -
Cec08g1473 314 CDD TLP-PA 26 246 - -
Cec08g1473 314 PANTHER OS03G0233200 PROTEIN 14 247 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
Cec08g1473 314 FunFam THAUMATIN-LIKE PROTEIN 1 25 247 - -
Cec08g1473 314 SMART tha2 27 247 IPR001938 -
Cec08g1473 314 Gene3D Thaumatin 25 247 IPR037176 -
Cec08g1473 314 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1236 Cec-Chr2:28863574 Cec08g1473 Cec-Chr8:26469886 4.40E-98 dispersed
Cec05g2004 Cec-Chr5:32025568 Cec08g1473 Cec-Chr8:26469886 3.50E-125 dispersed
Cec05g2697 Cec-Chr5:37530861 Cec08g1473 Cec-Chr8:26469886 1.20E-77 dispersed
Cec08g1473 Cec-Chr8:26469886 Cec10g0072 Cec-Chr10:733222 2.50E-91 dispersed
Cec08g1472 Cec-Chr8:26453904 Cec08g1473 Cec-Chr8:26469886 8.50E-77 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1473 - - - 0.0