Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1496 ATGGTTCTGCTGCTGCTTCAGCTACTAAGATGGTTGACATTGACAGTAGCATTTAGGCCACGCTCGCACGCCCGTGGTCTGGCCTTTAGGGAACTAAGGATTGAGACTTTTTCCCCCATCCCGCTGGCGGCGCACTTCTCAGAGCCGACCGTCACTCTCATCACCGGTGAGGCTAACGTGCGCACCTCACTCTCTTCTTCTTCCTTTCACCAATTCTTGAATGCCGCCATAGACGAGCTTCTTCAAGTTAGGAAGGAACTGTTTCTGATATTCGCGGGTATTTTTGGATTAGCTTCGAATTTTGTGGAGCACGGCCGAGAATGGTTGTGGAGTTACATTCCGCACGGGGGTTACACCATCCAGATTTGCTGGCTATTTATTGAATGTGGGGTTGGGAAGATGGATGGAGACAATAAGAAGTCTGGTTTTAGGAAAAGAACGAAGCCAAAGGATGGTGGGTTTGACTCTGATGATGATGAGCCCATTGGCTCTCTGCTGAAATTGAAGAGATCACGAAACTCTAAAAAGACTAAGTTGGGTGTAGATGATGGCGGTGAAAGGGACAACATAGTTGACAAGAAAGGAGCAAAATTGCCAGTGCAAGAGGACTTTGGGGGAATGGATGATACTTTAGCTAGTTTCAGAAAGAAGTTGAGGCGTCCTAAAAAGGTTAGTGGACCCGAAATTGCTAGGGAACAGAGTTCTGCTCTAAGTGTGACAGAATCTTTAGATCCACTATCTAATACGTCCAGAGGACAAGGGGATTTAGACACAAGATTGAGACCAGAAAATTGTGAATTAATGGATCGTGAAGAGTCTGATCCATCTGCAAAGATTGACATAGAAACAAGGTGTGAAGCACCTGATTTGGAATTAAAAGACATGGAGATGGGTATCCTGAGTAGGAGAAGTGCTAATTGCTCTTTCGATAAACAGTTGGATGATTCATTGTCTGCATTTGTCCAAAAGGTTCAGTCTGGTTCAACTAGGAAATCCTTGGTATCTACAACATTTAAACCAGACTGCAAGGATGAGGCTTCCGAAAATAAATTGAGTCCTTTTTCTAGAGCTGTTTCTGGGGATCATGAAACACACTCCATTGTGAGTTTTGATTCTTCGGCTAAGCTGGCACAAGTTGTCAAAAAAACAGATTCTGAACTTAATACATCGTATTTAATTTCCTGTTCACATTACACCAAAGAGAATTGTAATCCTGGTCGAGGACAATGCCATCTAGGGGTTGAATGTGACCAAGAAGAGTATCAATGCCCTCTAAATCACAAGAATCCTGACATGAGACCATGCATATCAAATGAAGTTGATTATGAAGACAGCAAAAACTTTACTCAATTGAGGGACAATTTCCGGGCACTGGAAAGAAAGGCATCCTGTGAAATCAAGAATGTACTAAAACATTGTTCTTGTGGCAATACAATGGTGGATAGCCATTTGGCAGTAATGGGTTCTTTTCAGGATGGGCTAGGTGAAAATCAACTTAATGAAATTATGTGCAGTTCTTGTCGTCCTCTAGAACAGGTAAATGAAAACCATGGCCTTTGTGGGGGTGTTTCCAGCAGAGATTTTTGTGATGTGGTGGCCCAAGAGACCACAGTCACTTTGTCTAAAATAACCCCAGGTGTAGATTGCGAAGGAAAAGAAAGATCACTTGTTATACATCACGATGAATTGCTGAACTCTACCAATTTCTGTGAAAGTTCTTCCAAAGAAATCCGTAGATCTACTAAAGGTTTGAAGGTTTCTGATCAATCATTAGGCAGAACAACACTCTCCAATCTTCAGTTATCTGCAGGTTTCGATTCATCGAAAGTGGATAAACCTTGCAGCGACTCTGATAATTTAAATACTGGAACTGATGAGCCGAATAATGAAGGTGGTTCTGTGCAAAAGGAAAATGCTCTGATCTCTAGGATTTCAGATTCAACTGCTGTTCAATCTCACAGATCTGAAAAATCTGGGGCAACTGCTTCTGGACCAAATTATCCAGAGGTTTGTCCTAGTGGAAATTTCAGCATGATATCAGATAGTCAACCGGCCAAGGCTTCAGTGGAGATAGATGGTCCAAATAATATACTTACTGGTAAAGAGGTTAAGGTATCTTCTCTTGGGTCTTTCACTCCAGATGATAATGACCTTGAGGATGTAATATCTGCTCCTGGTAGTGAAAAAGATTTAAAGCTTTCAGCTTTACGTGTAGCACGCAAGACAAAGAAGCCTAGACATGATGACATGGCTTATGAAGGAGATATTGATTGGGAGGTTTTGATTAGTGAGCGTGCAGTTGATGGCGACCATTCTTTCAGATCAAGAAAGGATTCTACATCAACGACTTTTACAGAGGCTGAAACTGGTGGTAGAGCTGCAGTGTCTGCAGGGCTTAAGGCACATGCAGTTGGTCTACTTGAGAAGATTAAATTTAAGGATGTGCTAAAGCGCAAAGGTGGGCTTCAAGAGTACATAGCATGCAGGAATCAGATCCTGGGCCTTTGGTGTAAAGATGTTACACGCATTTTGCATCTCGTTGACTGTGGGGTCACTGATACTCCCTCTATGGATGAACCACCACGTTTTCCCCTTATTAGGGAGATCTATGCATTTCTTAATCTACGTGGTTATATAAATGCGGGGATTGCTTCTGAGAAAGCCAAATCAGAATCTGACATTAAATATGATCATGAACTGGGAGAGAAGAAGGTTGGAGACGTTAGTGTTGCTTCAGCTGCTGGTTCTGAAGAAGGGGTTTCTGTCATGGTAAAAAATTCTGATGCTTCTAATGCAGAGAACGATGTTTCAGCTGGCTGTGAAGTAATATTGGAAGATGCTGAAGGAAGAGACCCCGTGATTGTAAATAATTTGGATTTACCAAAATCAGTGGAACATGAACAAGAATTGGTACATGACTTGGAGTATGGTACTCCTGGTTCTATACCGGTAAAATTGGTTGGTGATGTTCCAGGTAAAGCTGCCTCGCATTTAACTAATCATTCAAGAAATGGTTGGCACCCAATCCACTCCTCTGATGAGTGTGTAGGAGGTGATCAACAACAGCAGAGTAATTCTGATGTCAGAAAGAAAGTAATTGTTATTGGAGCTGGTCCTGCTGGCTTAACTGCTGCAAAGCACTTGCATCGTCAGGGCTTTGCTGTCACCATACTTGAAGCCAGGAACAGGTTAGGAGGTCGTGTTCATACAGATCGCTCCTCTCTTTCTGTTCCTGTAGATCTTGGTGCAAGTATTATTACAGGAGTAGAGGCTGATGTCACAAGCGAAAGAAGACCCGATCCTTCCTCATTGATTTGCACTCAATTGGGCCTTGAGTTGACTGTATTAAATAGTGACTGTCCCCTCTATGACATCATTACATGCAAAAAAGTTCCAGTAGACATGGACGAGGCTTTGGAAGCAGAATATAATAGTCTTCTTGATGACATGGTGTTGCTTGTTGCACAAAGAGGGGAGCATGCAATGGCCATGTCTCTCGAGGAGGGTTTAGAATATGCCCTTAAGCGACGACGCATGGCTCGAGGTATGGATGTTTGTTCTGAGGAAGAGGTTTTGAGTCCCTTTGAGAGGAGAGTTATGAATTGGCATTTTGCTAACTTGGAGTATGGTTGTGCTGCTATGCTCAAGAAAGTATCTCTTCCTAATTGGAATCAGGATGATCTTTATGGAGGTTTTGGAGGAGCTCATTGTATGATTAAAGGGGGTTATAGCACTGTTGTTGAGTCTCTTGGTGGAGGACTTGATGTTCACCTAAATCATGTTGTGGCTGATATTTCTTACAGCACCGATGACACTGGGTTTAATGGGAATCAGTGTGCAAAGGTAAAAGTTTCCACAACCAATGGTTGCATGTTTCTAGGAGATGCTGTCCTTATTACTGTGCCTCTTGGGTGCTTGAAAGCAGAAACTATTAAATTTTCTCCACCATTGCCTGAATGGAAGCGTCTGTCCATCCAGCGCCTTGGGTTTGGAGTTCTTAACAAAATAGTTCTTGAATTTCCAGAAGTTTTCTGGGATGACTCTGTGGATTATTTTGGGGCAACTGCAGAGGAAACAAAGTGGAGGGGGCAGTGTTTCATGTTTTGGAATGTAAGAAAAACAGTTGGTGCTCCAGTTCTCATAGCACTAGTGGTTGGTCAGGCTGCTGTGGAGAGGCAATTTATGAGCTCTTCCGATAATGTAAGCCATGCATTAATGGTCCTTCGGAAACTTTTTGGAGAAGCTATGGTACCTGATCCAGTTGCATCTGTTGTAACTGATTGGGGAAGAGATCCGTTTAGCTATGGTGCTTACTCATATGTTGCTGTTGGAGCGTCTGGAGAGGACTATGACATTTTAGCAAGACCTGTTGGAAACTGTTTGTTTTTTGCTGGTGAAGCTACTTGCAAGGAGCATCCTGACACTGTTGGGGGTGCAATGATGAGTGGGTTAAGAGAGGCTGTACGCATGATTGATGTACTGAGTGATGGTTATGATTTCACAGCAGAAGTAGAGGCAATGGAAGCTGCTCAAAGGCAGTCTGAGTGTGAGAATGATGAAGTTGGGGACATAATTACAAGACTAGATGCTGTTAAGCTCTCTGATGCTCTTTACAAAAATTCTTTGGATGGTGCAATTTTGACCACAGAAGCTTTACTACAAGATTTGTTTTTTAGTGCAAAAACCACAGCAGGGAGATTGCAAGTGGCAAAAGAATTGCTGAATCTCCCTGCTGAGACGTTGAAGTCCTTTGCAGGGACCAAAGAAGGTCTTACAGTTCTCAACTCATGGATTTTGGACTCGATGGGGAAGGATGGGACTCAACTTCTTCGGCAATGTGTTCGTATTCTTGTGTTAGTTTCGACAGATCTACTTGCAGTTCGCTTATCAGGCATAGGTAAAACTGTCAAAGAAAAGGTATGTGTGCATACAAGCCGTGACATCCGTGCTATTGCAAGTCAGTTGGTTAGCATTTGGCTTGAAGTTTTCCGTAAAGAAAAGGCTGCTAATGGGGGTTTAAAACTCTCTAAGTCAGTTTCTGCTGTAGAACTATTGAAGAGGAAATCTAATAAAGATTCTTCTTCTGGGAAACCTCCTTTGCATGCATACAACAGCACACTGGATAGTAGGGGCAATTTGCTGACTTCTGCATCAGCTGCAATTCCCTTGCAGTCTGATGTCAATATGAAAAATGATCATAGCAAACAATTAAAATTAGAAATGGAAAATTCATCAAAATCAGATATCAGTTCATCGAGGTCAAGGGGCTCATTCGGAAAGCAGGATGCAGAGATGGAAGACAACAACATTGCTATGACAGAAGAAGAGCAGGCTGCCTTTGCTGCTGCTGAGGCAGCACGTGCAGCCGCACTTGCAGCTGCGAAGGCATATGCATCATCTGAAGCCAAGAGTGCCATGCAGCTTCCAAAAATCCCCTCCTTTCACAAATTTGCTAGACGGGAGCATTATGCTCAAATGGATGAGTGTGAGTATAAGAAGAAGTTGTCTGGCAGTGTGCTTGGAAGACAAGATTGTATATCCGAAATAGATTCAAGAAACTGCAGGGTCAGGAACTGGTCTGTGGAATTTTCTGCTGCTTGCGTTAATCTTGAAAGTTCACGAATGTCTGCAGATAACCTTTCACAAAGAAGCCATTCGAATGAAATTGTTAGCCAATTAAACTTCAGGGAGCACTCTGGTGAAAGTGCTCCTGTGGATAGTAGTATATACACAAAAGCATGGGTTGATACAGCTGGTAGTGTTGGAATGAAAGATTATCATGCTATTGAGAGATGGCGCACTCAAGCAGCTGCAGCTCATGTAAATGATGAGGAGGATTCAAACACAAATTGGCATAAACCCACATGGAATAGTGATCAAGTAGCGAATGAGAGCTCAATATCACAAGTGACGATCAACAAGGAGCCCATAAGAAACAATCATCGTGGGGCTGACAGAATTAAGCAGGCTGTTGTTGATTATGTTGCTTCACTCTTGATGCCCCTTTACAAAGCAAGGAAAATCGACAAGGATGGATACAAGTCAATTATGAAGAAAAGTGCAACCAAGGTCATGGAACAGGCCACTGATGCAGAGAAAGGCATGACTGTGTCTGAGTTTCTTGATTTCAAACGTAGGAACAAGCTAGATGAGTCTACTGCTTGTGCGACTTGGAACACAACAAATGCAATATATGTACCGAGGCATCTTCGTATTCTAGTTCTAATTGTTGATGCAACAGCCTTGTTGCAAAAGATGTCGTCAACTTTCAGCGGCGATGAAACGGCACCCTTCTTCGGCTTCCTCGGCGCCGCTGCAGCCCTCGTCTTCTCCTGTATGGGAGCTGCTTATGGGACGGCGAAGAGCGGGGTGGGAGTTGCGTCTATGGGAGTAATGAGGCCTGAACTGGTGATGAAGTCAATTGTTCCGGTGGTTATGGCTGGAGTTTTGGGTATTTATGGTCTTATTATTGCTGTAATTATTAGTACAGGAATTAACCCGAAGGCCAAATCTTATTACCTCTTCGATGGTTACGCACATCTCTCCTCTGGCCTTGCTTGTGGGCTTGCCGGTCTGTCCGCTGGCATGGCTATCGGGATCGTCGGTGATGCTGGTGTTAGAGCCAATGCGCAGCAGCCTAAGCTTTTCGTTGGGATGATTCTTATTTTAATTTTTGCCGAAGCTTTGGCACTCTATGGACTTATTGTTGGCATTATTCTCTCTTCCCGAGCTGTTGAGATAGTCCTTTTGTGCAGTGACCGTTCTGTTCGAGTTAATGTCATAGAGTTCGAATGTAGCGTCGAGATTAACATATTTTCTTTATCATTGGGAATGGGATGGAACTAA 6846 43.12 MVLLLLQLLRWLTLTVAFRPRSHARGLAFRELRIETFSPIPLAAHFSEPTVTLITGEANVRTSLSSSSFHQFLNAAIDELLQVRKELFLIFAGIFGLASNFVEHGREWLWSYIPHGGYTIQICWLFIECGVGKMDGDNKKSGFRKRTKPKDGGFDSDDDEPIGSLLKLKRSRNSKKTKLGVDDGGERDNIVDKKGAKLPVQEDFGGMDDTLASFRKKLRRPKKVSGPEIAREQSSALSVTESLDPLSNTSRGQGDLDTRLRPENCELMDREESDPSAKIDIETRCEAPDLELKDMEMGILSRRSANCSFDKQLDDSLSAFVQKVQSGSTRKSLVSTTFKPDCKDEASENKLSPFSRAVSGDHETHSIVSFDSSAKLAQVVKKTDSELNTSYLISCSHYTKENCNPGRGQCHLGVECDQEEYQCPLNHKNPDMRPCISNEVDYEDSKNFTQLRDNFRALERKASCEIKNVLKHCSCGNTMVDSHLAVMGSFQDGLGENQLNEIMCSSCRPLEQVNENHGLCGGVSSRDFCDVVAQETTVTLSKITPGVDCEGKERSLVIHHDELLNSTNFCESSSKEIRRSTKGLKVSDQSLGRTTLSNLQLSAGFDSSKVDKPCSDSDNLNTGTDEPNNEGGSVQKENALISRISDSTAVQSHRSEKSGATASGPNYPEVCPSGNFSMISDSQPAKASVEIDGPNNILTGKEVKVSSLGSFTPDDNDLEDVISAPGSEKDLKLSALRVARKTKKPRHDDMAYEGDIDWEVLISERAVDGDHSFRSRKDSTSTTFTEAETGGRAAVSAGLKAHAVGLLEKIKFKDVLKRKGGLQEYIACRNQILGLWCKDVTRILHLVDCGVTDTPSMDEPPRFPLIREIYAFLNLRGYINAGIASEKAKSESDIKYDHELGEKKVGDVSVASAAGSEEGVSVMVKNSDASNAENDVSAGCEVILEDAEGRDPVIVNNLDLPKSVEHEQELVHDLEYGTPGSIPVKLVGDVPGKAASHLTNHSRNGWHPIHSSDECVGGDQQQQSNSDVRKKVIVIGAGPAGLTAAKHLHRQGFAVTILEARNRLGGRVHTDRSSLSVPVDLGASIITGVEADVTSERRPDPSSLICTQLGLELTVLNSDCPLYDIITCKKVPVDMDEALEAEYNSLLDDMVLLVAQRGEHAMAMSLEEGLEYALKRRRMARGMDVCSEEEVLSPFERRVMNWHFANLEYGCAAMLKKVSLPNWNQDDLYGGFGGAHCMIKGGYSTVVESLGGGLDVHLNHVVADISYSTDDTGFNGNQCAKVKVSTTNGCMFLGDAVLITVPLGCLKAETIKFSPPLPEWKRLSIQRLGFGVLNKIVLEFPEVFWDDSVDYFGATAEETKWRGQCFMFWNVRKTVGAPVLIALVVGQAAVERQFMSSSDNVSHALMVLRKLFGEAMVPDPVASVVTDWGRDPFSYGAYSYVAVGASGEDYDILARPVGNCLFFAGEATCKEHPDTVGGAMMSGLREAVRMIDVLSDGYDFTAEVEAMEAAQRQSECENDEVGDIITRLDAVKLSDALYKNSLDGAILTTEALLQDLFFSAKTTAGRLQVAKELLNLPAETLKSFAGTKEGLTVLNSWILDSMGKDGTQLLRQCVRILVLVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSIWLEVFRKEKAANGGLKLSKSVSAVELLKRKSNKDSSSGKPPLHAYNSTLDSRGNLLTSASAAIPLQSDVNMKNDHSKQLKLEMENSSKSDISSSRSRGSFGKQDAEMEDNNIAMTEEEQAAFAAAEAARAAALAAAKAYASSEAKSAMQLPKIPSFHKFARREHYAQMDECEYKKKLSGSVLGRQDCISEIDSRNCRVRNWSVEFSAACVNLESSRMSADNLSQRSHSNEIVSQLNFREHSGESAPVDSSIYTKAWVDTAGSVGMKDYHAIERWRTQAAAAHVNDEEDSNTNWHKPTWNSDQVANESSISQVTINKEPIRNNHRGADRIKQAVVDYVASLLMPLYKARKIDKDGYKSIMKKSATKVMEQATDAEKGMTVSEFLDFKRRNKLDESTACATWNTTNAIYVPRHLRILVLIVDATALLQKMSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAVEIVLLCSDRSVRVNVIEFECSVEINIFSLSLGMGWN 2281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26686105 26702687 + CePI673135_08g014960.1 Cec08g1496 210138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1496 2281 PANTHER FLAVIN MONOAMINE OXIDASE 1020 1493 IPR050281 GO:0016491(PANTHER)
Cec08g1496 2281 Gene3D - 1119 1446 - -
Cec08g1496 2281 SUPERFAMILY FAD-linked reductases, C-terminal domain 1329 1440 - -
Cec08g1496 2281 Gene3D - 790 893 IPR036388 -
Cec08g1496 2281 CDD ATP-synt_Vo_c_ATP6C_rpt1 2098 2165 - -
Cec08g1496 2281 Gene3D - 2096 2247 IPR035921 -
Cec08g1496 2281 Gene3D - 1032 1489 IPR036188 -
Cec08g1496 2281 MobiDBLite consensus disorder prediction 1743 1758 - -
Cec08g1496 2281 MobiDBLite consensus disorder prediction 218 262 - -
Cec08g1496 2281 SUPERFAMILY F1F0 ATP synthase subunit C 2172 2241 IPR035921 -
Cec08g1496 2281 MobiDBLite consensus disorder prediction 231 255 - -
Cec08g1496 2281 CDD ATP-synt_Vo_c_ATP6C_rpt2 2174 2241 - -
Cec08g1496 2281 SUPERFAMILY Homeodomain-like 792 886 IPR009057 -
Cec08g1496 2281 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1587 1672 IPR035441 -
Cec08g1496 2281 Pfam SWIRM domain 807 880 IPR007526 GO:0005515(InterPro)
Cec08g1496 2281 SUPERFAMILY FAD/NAD(P)-binding domain 1029 1493 IPR036188 -
Cec08g1496 2281 MobiDBLite consensus disorder prediction 607 668 - -
Cec08g1496 2281 NCBIfam V-type ATPase subunit C 2098 2206 IPR011555 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cec08g1496 2281 MobiDBLite consensus disorder prediction 1741 1762 - -
Cec08g1496 2281 ProSiteProfiles SWIRM domain profile. 790 890 IPR007526 GO:0005515(InterPro)
Cec08g1496 2281 FunFam V-type proton ATPase proteolipid subunit 2096 2247 - -
Cec08g1496 2281 MobiDBLite consensus disorder prediction 138 159 - -
Cec08g1496 2281 Pfam ATP synthase subunit C 2182 2240 IPR002379 GO:0015078(InterPro)|GO:0033177(InterPro)|GO:1902600(InterPro)
Cec08g1496 2281 Pfam ATP synthase subunit C 2102 2161 IPR002379 GO:0015078(InterPro)|GO:0033177(InterPro)|GO:1902600(InterPro)
Cec08g1496 2281 Pfam Flavin containing amine oxidoreductase 1040 1491 IPR002937 GO:0016491(InterPro)
Cec08g1496 2281 PRINTS Vacuolar ATP synthase 16kDa subunit signature 2192 2218 IPR000245 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cec08g1496 2281 PRINTS Vacuolar ATP synthase 16kDa subunit signature 2219 2242 IPR000245 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cec08g1496 2281 PRINTS Vacuolar ATP synthase 16kDa subunit signature 2141 2165 IPR000245 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cec08g1496 2281 PRINTS Vacuolar ATP synthase 16kDa subunit signature 2115 2139 IPR000245 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cec08g1496 2281 MobiDBLite consensus disorder prediction 614 668 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1180 Cec-Chr7:27188964 Cec08g1496 Cec-Chr8:26686105 1.10E-61 dispersed
Cec08g1496 Cec-Chr8:26686105 Cec11g1888 Cec-Chr11:33102087 5.80E-84 dispersed
Cec08g1496 Cec-Chr8:26686105 Cec08g1497 Cec-Chr8:26704086 3.30E-71 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30101 PF01593 Amino_oxidase 1.80E-98 CL0063 Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1496 - - - 0.0