Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1510 | ATGGCGGACGCAGGCTCCGTCTCCCACAAGAGAATGTCGTGTTCTATCCCCGAGAGATTCCAGCTCCATGCGGCCATGTTGGCCTTGCAATTCGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCTCTCAACATGGGCATCAGTAAACTTGTCTTCCCTGTCTACCGAAACGTCATCGCTTTGCTCCTCCTCCTCCCCTTCGCATATTTCATCGAAAAGAAAGATAGGCCTGCACTCACTGTCAACTTTGTCCTTCAGTTCTTCCTACTCGCTCTTGTTGGAATTACAGCCAATCAAGGGTTTTATTTGCTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAAAATTCTGTCCCTGCCATTACTTTCTTCATGGCTGCACTTCTCAGGATTGAGCAAGTGCGACTGAACCGAAAAGATGGGATAGCGAAGGTGATGGGTACAATATGTTGCGTAGCCGGAGCGACGGTGATCACGTTATACAAAGGGCCCACCATCTACAGCCCAGCAACGACAACGGTGATGGTACAAGAGACAGCAGAGACGGCGGGGACGATGCTGATGGGGCCGGGAATGTTCCCGTCGTTAGGCGACGCAAAGGGGAAAAGCTGGACGTTAGGGTGCGTTTACTTGATCGGACACTGCTTGTCGTGGTCGGCGTGGCTAGTCCTACAAGCACCGGTGCTGAAAAAATATCCGGCTCGCCTCTCAGTTACCTCCTTCACTTGCTTCTTTGGCCTCATCCAATTCCTCATCATCGCCCTCGCCTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCACTCCGGCGCTGAAGCCTTTAGCATCGTTTATGCTGGGGTGGTGGCTTCGGGGATAGCGTTTGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCGGTCTTCGTTGCTGTCTACCAACCGGTTCAGACCTTCGTTGTTGCTCTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTATTTGGGAGGGATCATAGGAGCGGTGCTGATTATATCAGGACTGTACCTTGTGCTATGGGGAAAGAGCGAAGAAAAGAAGATCTTATTGGAAAGAGCTGTGATCCAGTCCGCCCCGGACCACGGCAGCAGCAGAACAAGTAGCCACGTCAAGCCGTCCATTACCCAGCCACTTCTCCATCCTACGGCTGACAATGTTTGA | 1188 | 52.36 | MADAGSVSHKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPALTVNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFFMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPATTTVMVQETAETAGTMLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFLIIALAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKILLERAVIQSAPDHGSSRTSSHVKPSITQPLLHPTADNV | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 26841942 | 26846058 | + | CePI673135_08g015100.1 | Cec08g1510 | 210152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1510 | 395 | PANTHER | WAT1-RELATED PROTEIN | 24 | 367 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Cec08g1510 | 395 | MobiDBLite | consensus disorder prediction | 368 | 395 | - | - | |
Cec08g1510 | 395 | Pfam | EamA-like transporter family | 27 | 163 | IPR000620 | GO:0016020(InterPro) | |
Cec08g1510 | 395 | Pfam | EamA-like transporter family | 210 | 348 | IPR000620 | GO:0016020(InterPro) | |
Cec08g1510 | 395 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 56 | 166 | - | - | |
Cec08g1510 | 395 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 252 | 352 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1510 | Cec-Chr8:26841942 | Cec10g1660 | Cec-Chr10:31079733 | 2.40E-62 | dispersed | |
Cec01g0132 | Cec-Chr1:1230635 | Cec08g1510 | Cec-Chr8:26841942 | 3.60E-57 | transposed | |
Cec03g0780 | Cec-Chr3:8820713 | Cec08g1510 | Cec-Chr8:26841942 | 1.70E-56 | transposed | |
Cec06g1656 | Cec-Chr6:30162880 | Cec08g1510 | Cec-Chr8:26841942 | 3.70E-110 | transposed | |
Cec11g1652 | Cec-Chr11:30832818 | Cec08g1510 | Cec-Chr8:26841942 | 9.40E-61 | transposed | |
Cec05g2047 | Cec-Chr5:32397010 | Cec08g1510 | Cec-Chr8:26841942 | 5.60E-165 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1510 | - | - | - | 0.0 |