Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1510 ATGGCGGACGCAGGCTCCGTCTCCCACAAGAGAATGTCGTGTTCTATCCCCGAGAGATTCCAGCTCCATGCGGCCATGTTGGCCTTGCAATTCGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCTCTCAACATGGGCATCAGTAAACTTGTCTTCCCTGTCTACCGAAACGTCATCGCTTTGCTCCTCCTCCTCCCCTTCGCATATTTCATCGAAAAGAAAGATAGGCCTGCACTCACTGTCAACTTTGTCCTTCAGTTCTTCCTACTCGCTCTTGTTGGAATTACAGCCAATCAAGGGTTTTATTTGCTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAAAATTCTGTCCCTGCCATTACTTTCTTCATGGCTGCACTTCTCAGGATTGAGCAAGTGCGACTGAACCGAAAAGATGGGATAGCGAAGGTGATGGGTACAATATGTTGCGTAGCCGGAGCGACGGTGATCACGTTATACAAAGGGCCCACCATCTACAGCCCAGCAACGACAACGGTGATGGTACAAGAGACAGCAGAGACGGCGGGGACGATGCTGATGGGGCCGGGAATGTTCCCGTCGTTAGGCGACGCAAAGGGGAAAAGCTGGACGTTAGGGTGCGTTTACTTGATCGGACACTGCTTGTCGTGGTCGGCGTGGCTAGTCCTACAAGCACCGGTGCTGAAAAAATATCCGGCTCGCCTCTCAGTTACCTCCTTCACTTGCTTCTTTGGCCTCATCCAATTCCTCATCATCGCCCTCGCCTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCACTCCGGCGCTGAAGCCTTTAGCATCGTTTATGCTGGGGTGGTGGCTTCGGGGATAGCGTTTGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCGGTCTTCGTTGCTGTCTACCAACCGGTTCAGACCTTCGTTGTTGCTCTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTATTTGGGAGGGATCATAGGAGCGGTGCTGATTATATCAGGACTGTACCTTGTGCTATGGGGAAAGAGCGAAGAAAAGAAGATCTTATTGGAAAGAGCTGTGATCCAGTCCGCCCCGGACCACGGCAGCAGCAGAACAAGTAGCCACGTCAAGCCGTCCATTACCCAGCCACTTCTCCATCCTACGGCTGACAATGTTTGA 1188 52.36 MADAGSVSHKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPALTVNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFFMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPATTTVMVQETAETAGTMLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFLIIALAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKILLERAVIQSAPDHGSSRTSSHVKPSITQPLLHPTADNV 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26841942 26846058 + CePI673135_08g015100.1 Cec08g1510 210152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1510 395 PANTHER WAT1-RELATED PROTEIN 24 367 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec08g1510 395 MobiDBLite consensus disorder prediction 368 395 - -
Cec08g1510 395 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020(InterPro)
Cec08g1510 395 Pfam EamA-like transporter family 210 348 IPR000620 GO:0016020(InterPro)
Cec08g1510 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Cec08g1510 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1510 Cec-Chr8:26841942 Cec10g1660 Cec-Chr10:31079733 2.40E-62 dispersed
Cec01g0132 Cec-Chr1:1230635 Cec08g1510 Cec-Chr8:26841942 3.60E-57 transposed
Cec03g0780 Cec-Chr3:8820713 Cec08g1510 Cec-Chr8:26841942 1.70E-56 transposed
Cec06g1656 Cec-Chr6:30162880 Cec08g1510 Cec-Chr8:26841942 3.70E-110 transposed
Cec11g1652 Cec-Chr11:30832818 Cec08g1510 Cec-Chr8:26841942 9.40E-61 transposed
Cec05g2047 Cec-Chr5:32397010 Cec08g1510 Cec-Chr8:26841942 5.60E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1510 - - - 0.0