Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1512 ATGTTGAAATCTTCATCCAACAGCAACAAAAGACCCTCTTCAAGAAAGGGTTGTATGAGAGGCAAAGGAGGCCCTGAAAACGCTTCTTGTACTTATAAAGGTGTTCGTCAAAGAACTTGGGGAAAATGGGTTGCTGAAATTCGAGAGCCAAATCGTGGAGCTCGTCTTTGGCTTGGTACTTTTGATACTTCTCATGATGCTGCTTTAGCCTATGACAATGCTGCTCGTCGTCTTTATGGCTCTGATGCTAAACTCAATCTCCCTCATCTTTCTCCTGTTTCTGCTTCTTCTTCTTCTTCTTCTGATAATGTTGCTGCTAATTCTAATTCTAATTCTAATGCCAATGCCATTGTGGAAGATGTTGCTTCCTCTGTTTCTCATGAAAACAACAATAACAACACTGTATTGCCTAAGAAGAGATTTAGGGAGGAAGAGGAAGAACAAATTGGGGGGCTTTGGAGAGCTATGAGTATTAGTTTAGATGATTCTATTTGGGTTGAAGCAGCTATGTCTTTGGATTTTCCTATTGTTATGGAACATGAGCAGGATCATCATCATCAAGGCTTTTTTGCTGCTAATTTGATGGAAACAAATGGAAATGGTGGATGTGGATGGGATACACTTCAATGGTGTTTATGA 639 40.06 MLKSSSNSNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSSDNVAANSNSNSNANAIVEDVASSVSHENNNNNTVLPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLMETNGNGGCGWDTLQWCL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26852543 26853181 - CePI673135_08g015120.1 Cec08g1512 210154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1512 212 Gene3D AP2/ERF domain 31 89 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1512 212 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677(InterPro)
Cec08g1512 212 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 134 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006950(PANTHER)|GO:0045893(PANTHER)
Cec08g1512 212 Pfam AP2 domain 32 80 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1512 212 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1512 212 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1512 212 FunFam Ethylene-responsive transcription factor 2 30 89 - -
Cec08g1512 212 SMART rav1_2 31 94 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1512 212 MobiDBLite consensus disorder prediction 1 30 - -
Cec08g1512 212 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1512 212 CDD AP2 30 90 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1512 Cec-Chr8:26852543 Cec11g1592 Cec-Chr11:30255730 3.30E-18 dispersed
Cec10g1732 Cec-Chr10:31980028 Cec08g1512 Cec-Chr8:26852543 2.20E-27 transposed
Cec11g0630 Cec-Chr11:6940045 Cec08g1512 Cec-Chr8:26852543 2.10E-19 transposed
Cec04g1131 Cec-Chr4:30910810 Cec08g1512 Cec-Chr8:26852543 2.90E-13 wgd
Cec05g2048 Cec-Chr5:32402836 Cec08g1512 Cec-Chr8:26852543 2.10E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30104 PF00847 AP2 2.60E-14 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1512 - - - 0.0