Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1512 | ATGTTGAAATCTTCATCCAACAGCAACAAAAGACCCTCTTCAAGAAAGGGTTGTATGAGAGGCAAAGGAGGCCCTGAAAACGCTTCTTGTACTTATAAAGGTGTTCGTCAAAGAACTTGGGGAAAATGGGTTGCTGAAATTCGAGAGCCAAATCGTGGAGCTCGTCTTTGGCTTGGTACTTTTGATACTTCTCATGATGCTGCTTTAGCCTATGACAATGCTGCTCGTCGTCTTTATGGCTCTGATGCTAAACTCAATCTCCCTCATCTTTCTCCTGTTTCTGCTTCTTCTTCTTCTTCTTCTGATAATGTTGCTGCTAATTCTAATTCTAATTCTAATGCCAATGCCATTGTGGAAGATGTTGCTTCCTCTGTTTCTCATGAAAACAACAATAACAACACTGTATTGCCTAAGAAGAGATTTAGGGAGGAAGAGGAAGAACAAATTGGGGGGCTTTGGAGAGCTATGAGTATTAGTTTAGATGATTCTATTTGGGTTGAAGCAGCTATGTCTTTGGATTTTCCTATTGTTATGGAACATGAGCAGGATCATCATCATCAAGGCTTTTTTGCTGCTAATTTGATGGAAACAAATGGAAATGGTGGATGTGGATGGGATACACTTCAATGGTGTTTATGA | 639 | 40.06 | MLKSSSNSNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSSDNVAANSNSNSNANAIVEDVASSVSHENNNNNTVLPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLMETNGNGGCGWDTLQWCL | 212 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 26852543 | 26853181 | - | CePI673135_08g015120.1 | Cec08g1512 | 210154 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1512 | 212 | Gene3D | AP2/ERF domain | 31 | 89 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g1512 | 212 | SUPERFAMILY | DNA-binding domain | 31 | 89 | IPR016177 | GO:0003677(InterPro) | |
Cec08g1512 | 212 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 8 | 134 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006950(PANTHER)|GO:0045893(PANTHER) | |
Cec08g1512 | 212 | Pfam | AP2 domain | 32 | 80 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g1512 | 212 | PRINTS | Ethylene responsive element binding protein signature | 32 | 43 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g1512 | 212 | PRINTS | Ethylene responsive element binding protein signature | 54 | 70 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g1512 | 212 | FunFam | Ethylene-responsive transcription factor 2 | 30 | 89 | - | - | |
Cec08g1512 | 212 | SMART | rav1_2 | 31 | 94 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g1512 | 212 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cec08g1512 | 212 | ProSiteProfiles | AP2/ERF domain profile. | 31 | 88 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec08g1512 | 212 | CDD | AP2 | 30 | 90 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1512 | Cec-Chr8:26852543 | Cec11g1592 | Cec-Chr11:30255730 | 3.30E-18 | dispersed | |
Cec10g1732 | Cec-Chr10:31980028 | Cec08g1512 | Cec-Chr8:26852543 | 2.20E-27 | transposed | |
Cec11g0630 | Cec-Chr11:6940045 | Cec08g1512 | Cec-Chr8:26852543 | 2.10E-19 | transposed | |
Cec04g1131 | Cec-Chr4:30910810 | Cec08g1512 | Cec-Chr8:26852543 | 2.90E-13 | wgd | |
Cec05g2048 | Cec-Chr5:32402836 | Cec08g1512 | Cec-Chr8:26852543 | 2.10E-45 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30104 | PF00847 | AP2 | 2.60E-14 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1512 | - | - | - | 0.0 |