Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1526 ATGAAAGCAGAAGAAAATGGGTCCCATCAAGAAAGAGAGATTAAAGAAGAAGAAGAAGAAGAAACAGAAGAGGGGGTTTTTCTTCTTTTTCCCACTTGGGGTTTCTCTGTTCCTTCTGATTCTATCATGGGATCTACTGTTTTCCACTTTCTTCAAGATCAGTGTTTCTTGTCTGTTCTAATGCTGTACCTTACATCTGTTTGCCTTTTGTTGAGCTTCGTTATAGCTGATTATAGTTACATCAACGTGTTCTTGATGGGAATGGCGACCCCTGTAGAGCCTCCAAATGGGGTTAGATCTCAAGGAAAACATTACTTTTCAATGTGGCAGACATTGTTTGAGATTGATACTAAATATGTACCTATCAAGCCGATTGGTCGAGGGGCATATGGTATTGTGTGTTCTTCTGTGAACAGGGAAACAAACGAGAAAGTTGCGATAAAGAGGATACATAATGCGTTTGAGAATCGTATTGATGCGCTCCGGACTTTGCGTGAATTGAAACTCCTTAGGCATCTTCGCCACGAAAATGTCATATGTTTGAAAGATGTGATGATGCCTATCCATAGGAGAAGTTTCAAAGATGTTTATTTGGTTTATGAACTGATGGATACTGATCTGCATCAGATTATTAAGTCTTCTCAAACTCTTACAAACGACCACTGCCAATATTTCCTCTTTCAGTTGCTCCGAGGCCTAAAGTATCTGCATTCTGCGAACATCCTACATCGGGACTTGAAGCCAGGGAACCTCCTTGTCAATGCAAATTGTGATCTTAAGATATGTGATTTTGGGTTAGCGCGTACGAGCAATGGGAAGAATCAATTTATGACGGAGTATGTTGTAACTCGCTGGTATCGAGCCCCAGAGCTGCTGCTCTGCTGCGAGAATTACGGGACGTCAATTGATGTGTGGTCTGTAGGATGCATCTTTGCCGAACTTCTGGGTAGGAAACCTATCTTCCCCGGTACAGAATGTCTGAATCAACTCAAATTGATAATTAACTTACTGGGTAGCCAGAGAGAGGAAGATCTTGAGTTCATAGACAATCCAAAGGCAAGAAGGTATATAAAATCCCTTCCATACTCTCCTGGGGCTCCTCTTTCCCGTCTTTATCCAAATGCTCATCCTCTTGCAATCGATCTGCTACAAAAGATGCTCGTCTTTGACCCATCAAAGAGGATTAGTGTAACTGAGGCATTGCAACATCCTTACATGTCCCCACTGTATGATCCAAACAGCAATCCTCCAGCTCAGGTGCCGATCGATCTCGACATAGATGAGGAACTTGGAGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCACCCCGAGGATCTGGAAGAACACGCAGAAATGACATGTTTCCACCCCGAACATACTACGAGTAGTACCGCAGTGTATTCTTGA 1422 42.48 MKAEENGSHQEREIKEEEEEETEEGVFLLFPTWGFSVPSDSIMGSTVFHFLQDQCFLSVLMLYLTSVCLLLSFVIADYSYINVFLMGMATPVEPPNGVRSQGKHYFSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINLLGSQREEDLEFIDNPKARRYIKSLPYSPGAPLSRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSPLYDPNSNPPAQVPIDLDIDEELGEEMIREMMWKEMLHYHPEDLEEHAEMTCFHPEHTTSSTAVYS 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26958400 26961841 - CePI673135_08g015260.1 Cec08g1526 210168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1526 473 FunFam Mitogen-activated protein kinase 203 432 - -
Cec08g1526 473 SMART serkin_6 119 406 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1526 473 SUPERFAMILY Protein kinase-like (PK-like) 111 413 IPR011009 -
Cec08g1526 473 Gene3D Transferase(Phosphotransferase) domain 1 203 432 - -
Cec08g1526 473 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524(InterPro)
Cec08g1526 473 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 113 444 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec08g1526 473 MobiDBLite consensus disorder prediction 1 23 - -
Cec08g1526 473 Pfam Protein kinase domain 121 406 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1526 473 MobiDBLite consensus disorder prediction 1 15 - -
Cec08g1526 473 ProSitePatterns MAP kinase signature. 154 257 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1526 473 CDD STKc_TEY_MAPK 113 448 - -
Cec08g1526 473 Gene3D Phosphorylase Kinase; domain 1 106 442 - -
Cec08g1526 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g1526 473 FunFam Mitogen-activated protein kinase 105 213 - -
Cec08g1526 473 ProSiteProfiles Protein kinase domain profile. 119 406 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0943 Cec-Chr7:23284865 Cec08g1526 Cec-Chr8:26958400 6.20E-167 dispersed
Cec08g1048 Cec-Chr8:22357171 Cec08g1526 Cec-Chr8:26958400 5.20E-113 dispersed
Cec08g1526 Cec-Chr8:26958400 Cec09g2339 Cec-Chr9:40244236 4.00E-88 dispersed
Cec08g1526 Cec-Chr8:26958400 Cec06g0355 Cec-Chr6:4074134 1.10E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72214 PF00069 Pkinase 4.30E-71 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1526 K20535 - csv:101213478 764.222