Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1575 ATGACCTCCGACGGCGCCACTTCTGCCTCCACTTGCCGGCGGAAGCCGTCTTGGAGGGAGCGGGAGAATAATCGGACCAGAGAGCGTCGGAGGAGAGCCATCGCCGCTAAGATTTACTCTGGCCTTAGGGCTCAGGGAAACTTCAATTTGCCTAAACACTGTGACAACAACGAGGTCCTTAAAGCCCTCTGTGCTGAAGCTGGTTGGACCGTCGAAGATGACGGAACCACTTATCGGAAGGGATGCAAGCCGCCCCCAATTGATATTGTTGGCACTTCAACCAAAATCACCCCTTACTCTTCCCAAAATCCAAGCCCATTGTCTTCTTCATTCCCCAGTCCTATGGGATCCTACCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTCTCGACGACAACAATCCGTCGAACCTCATTCCTTATCTTCGCCAAGCGATTCCCATATCTCTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCGAGGACTCCGCAGCCATTCACCAATTGGGAAGTCACTGCTAAAGAATCCTTATCCTCCTTGAATTACCCTTTCTTTGCAGTATCTGCTCCAGCTAGCCCGACTCGACCTCAGCTCCATACTCCCGCCACGATCCACAAATTCGACGAATCTGAATCATCCACCAATGAGTCCACTCAATGGGCACTTCTCCGTGCCTATGCACCTTCTGCATCGACAATGCCAACATCTCCCACGTTCAACCTTGTGAAACATGCTGACCAACATGCTCTACACGATGGTTTCGTCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTACAAGGTTAAGCCTTGGGAAGGGGAGAAGATTCATGATGTCGGATTGGAGGATTTAGAGCTCACACTCGGTAGCGGTAAGGCTCGAAGCTAA 936 51.6 MTSDGATSASTCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCKPPPIDIVGTSTKITPYSSQNPSPLSSSFPSPMGSYQVSPSSSSFPSPSRLDDNNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFTNWEVTAKESLSSLNYPFFAVSAPASPTRPQLHTPATIHKFDESESSTNESTQWALLRAYAPSASTMPTSPTFNLVKHADQHALHDGFVKENGRGNEFEFLGYKVKPWEGEKIHDVGLEDLELTLGSGKARS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27316678 27317972 - CePI673135_08g015750.1 Cec08g1575 210217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1575 311 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 12 310 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cec08g1575 311 MobiDBLite consensus disorder prediction 14 29 - -
Cec08g1575 311 MobiDBLite consensus disorder prediction 1 29 - -
Cec08g1575 311 MobiDBLite consensus disorder prediction 93 135 - -
Cec08g1575 311 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1113 Cec-Chr7:26331372 Cec08g1575 Cec-Chr8:27316678 2.90E-45 dispersed
Cec04g1622 Cec-Chr4:35562619 Cec08g1575 Cec-Chr8:27316678 2.50E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30110 PF05687 BES1_N 3.50E-62 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1575 K14503 - csv:101219853 523.857